RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 ARXQ96QS3 562 aa17.19■□□□□ 0.34
SH2D3A-208ENST00000599563 COL3A1P02461 1466 aaPredicted RBP17.18■□□□□ 0.34
SH2D3A-208ENST00000599563 MAP3K5Q99683 1374 aa17.18■□□□□ 0.34
SH2D3A-208ENST00000599563 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
SH2D3A-208ENST00000599563 CABP4P57796 275 aa17.18■□□□□ 0.34
SH2D3A-208ENST00000599563 AK7Q96M32 723 aa17.18■□□□□ 0.34
SH2D3A-208ENST00000599563 KDM6AO15550 1401 aaPredicted RBP17.18■□□□□ 0.34
SH2D3A-208ENST00000599563 ANP32CO43423 234 aa17.17■□□□□ 0.34
SH2D3A-208ENST00000599563 AKAP4Q5JQC9 854 aa17.17■□□□□ 0.34
SH2D3A-208ENST00000599563 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
SH2D3A-208ENST00000599563 MSH5O43196 834 aa17.16■□□□□ 0.34
SH2D3A-208ENST00000599563 RALBP1Q15311 655 aa17.16■□□□□ 0.34
SH2D3A-208ENST00000599563 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
SH2D3A-208ENST00000599563 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
SH2D3A-208ENST00000599563 HMOX1P09601 288 aa17.15■□□□□ 0.34
SH2D3A-208ENST00000599563 ATP6V1AP38606 617 aa17.15■□□□□ 0.34
SH2D3A-208ENST00000599563 COL5A3P25940 1745 aaPredicted RBP17.14■□□□□ 0.33
SH2D3A-208ENST00000599563 SSFA2P28290 1259 aa17.14■□□□□ 0.33
SH2D3A-208ENST00000599563 COL23A1Q86Y22 540 aaPredicted RBP17.14■□□□□ 0.33
SH2D3A-208ENST00000599563 FHDC1Q9C0D6 1143 aaPredicted RBP17.14■□□□□ 0.33
SH2D3A-208ENST00000599563 ADAMTS7Q9UKP4 1686 aa17.13■□□□□ 0.33
SH2D3A-208ENST00000599563 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
SH2D3A-208ENST00000599563 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
SH2D3A-208ENST00000599563 MIER1Q8N108 512 aa17.13■□□□□ 0.33
SH2D3A-208ENST00000599563 SYT17Q9BSW7 474 aa17.13■□□□□ 0.33
SH2D3A-208ENST00000599563 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
SH2D3A-208ENST00000599563 CICQ96RK0 1608 aaPredicted RBP17.13■□□□□ 0.33
SH2D3A-208ENST00000599563 MRC1P22897 1456 aa17.12■□□□□ 0.33
SH2D3A-208ENST00000599563 NFATC2IPQ8NCF5 419 aa17.11■□□□□ 0.33
SH2D3A-208ENST00000599563 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
SH2D3A-208ENST00000599563 ITPK1Q13572 414 aa17.1■□□□□ 0.33
SH2D3A-208ENST00000599563 RC3H1Q5TC82 1133 aaKnown RBP17.1■□□□□ 0.33
SH2D3A-208ENST00000599563 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
SH2D3A-208ENST00000599563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.09■□□□□ 0.33
SH2D3A-208ENST00000599563 GNPATO15228 680 aa17.09■□□□□ 0.33
SH2D3A-208ENST00000599563 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
SH2D3A-208ENST00000599563 GAS2L2Q8NHY3 880 aa17.09■□□□□ 0.33
SH2D3A-208ENST00000599563 SLC52A2Q9HAB3 445 aa17.09■□□□□ 0.33
SH2D3A-208ENST00000599563 CNTNAP4Q9C0A0 1308 aa17.08■□□□□ 0.32
SH2D3A-208ENST00000599563 ADRA2BP18089 450 aa17.08■□□□□ 0.32
SH2D3A-208ENST00000599563 RNMTO43148 476 aaKnown RBP17.07■□□□□ 0.32
SH2D3A-208ENST00000599563 PHF14O94880 888 aa17.07■□□□□ 0.32
SH2D3A-208ENST00000599563 RTCBQ9Y3I0 505 aaKnown RBP17.07■□□□□ 0.32
SH2D3A-208ENST00000599563 CHD4Q14839 1912 aa17.07■□□□□ 0.32
SH2D3A-208ENST00000599563 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
SH2D3A-208ENST00000599563 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
SH2D3A-208ENST00000599563 TJP1Q07157 1748 aa17.06■□□□□ 0.32
SH2D3A-208ENST00000599563 GNAT3A8MTJ3 354 aa17.05■□□□□ 0.32
SH2D3A-208ENST00000599563 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
SH2D3A-208ENST00000599563 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
SH2D3A-208ENST00000599563 SLC4A9Q96Q91 983 aa17.05■□□□□ 0.32
SH2D3A-208ENST00000599563 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
SH2D3A-208ENST00000599563 MYH14Q7Z406 1995 aaKnown RBP17.05■□□□□ 0.32
SH2D3A-208ENST00000599563 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
SH2D3A-208ENST00000599563 FCHSD2O94868 740 aa17.04■□□□□ 0.32
SH2D3A-208ENST00000599563 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
SH2D3A-208ENST00000599563 SIPA1L3O60292 1781 aaPredicted RBP17.04■□□□□ 0.32
SH2D3A-208ENST00000599563 RPS6KA4O75676 772 aa17.03■□□□□ 0.32
SH2D3A-208ENST00000599563 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
SH2D3A-208ENST00000599563 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.32
SH2D3A-208ENST00000599563 TEFQ10587 303 aa17.03■□□□□ 0.32
SH2D3A-208ENST00000599563 CD2APQ9Y5K6 639 aa17.03■□□□□ 0.32
SH2D3A-208ENST00000599563 C4AP0C0L4 1744 aa17.02■□□□□ 0.32
SH2D3A-208ENST00000599563 NEFMP07197 916 aa17.02■□□□□ 0.32
SH2D3A-208ENST00000599563 PRKAR2BP31323 418 aa17.02■□□□□ 0.32
SH2D3A-208ENST00000599563 AMIGO3Q86WK7 504 aa17.02■□□□□ 0.32
SH2D3A-208ENST00000599563 NLGN1Q8N2Q7 840 aa17.02■□□□□ 0.32
SH2D3A-208ENST00000599563 RSPH6AQ9H0K4 717 aa17.02■□□□□ 0.32
SH2D3A-208ENST00000599563 YY1P25490 414 aa17.01■□□□□ 0.31
SH2D3A-208ENST00000599563 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
SH2D3A-208ENST00000599563 MRS2Q9HD23 443 aa17.01■□□□□ 0.31
SH2D3A-208ENST00000599563 RFC4P35249 363 aa17■□□□□ 0.31
SH2D3A-208ENST00000599563 CRKLP46109 303 aaKnown RBP17■□□□□ 0.31
SH2D3A-208ENST00000599563 GPR162Q16538 588 aa17■□□□□ 0.31
SH2D3A-208ENST00000599563 TTC5Q8N0Z6 440 aa17■□□□□ 0.31
SH2D3A-208ENST00000599563 KCPQ6ZWJ8 1503 aa17■□□□□ 0.31
SH2D3A-208ENST00000599563 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
SH2D3A-208ENST00000599563 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
SH2D3A-208ENST00000599563 IL17REQ8NFR9 667 aa16.98■□□□□ 0.31
SH2D3A-208ENST00000599563 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
SH2D3A-208ENST00000599563 ARHGEF1Q92888 912 aaKnown RBP16.98■□□□□ 0.31
SH2D3A-208ENST00000599563 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
SH2D3A-208ENST00000599563 CCDC87Q9NVE4 849 aa16.98■□□□□ 0.31
SH2D3A-208ENST00000599563 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
SH2D3A-208ENST00000599563 HTATSF1O43719 755 aaKnown RBP16.97■□□□□ 0.31
SH2D3A-208ENST00000599563 SLC39A6Q13433 755 aa16.97■□□□□ 0.31
SH2D3A-208ENST00000599563 TEX13AQ9BXU3 409 aaPredicted RBP16.97■□□□□ 0.31
SH2D3A-208ENST00000599563 KIF13BQ9NQT8 1826 aa16.97■□□□□ 0.31
SH2D3A-208ENST00000599563 GRIN3BO60391 1043 aa16.96■□□□□ 0.31
SH2D3A-208ENST00000599563 STARD3NLO95772 234 aa16.96■□□□□ 0.31
SH2D3A-208ENST00000599563 SMIM5Q71RC9 77 aa16.96■□□□□ 0.31
SH2D3A-208ENST00000599563 DNAJC10Q8IXB1 793 aa16.96■□□□□ 0.31
SH2D3A-208ENST00000599563 NLGN2Q8NFZ4 835 aa16.96■□□□□ 0.31
SH2D3A-208ENST00000599563 MMP10P09238 476 aa16.95■□□□□ 0.3
SH2D3A-208ENST00000599563 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
SH2D3A-208ENST00000599563 ZNF790Q6PG37 636 aa16.95■□□□□ 0.3
SH2D3A-208ENST00000599563 GYS1P13807 737 aa16.94■□□□□ 0.3
SH2D3A-208ENST00000599563 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
SH2D3A-208ENST00000599563 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
SH2D3A-208ENST00000599563 USP42Q9H9J4 1324 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms