RNA–Protein interactions for RNA: ENST00000599310.5

SMIM7-217, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,123 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-217ENST00000599310 COL24A1Q17RW2 1714 aa22.03■■□□□ 1.12
SMIM7-217ENST00000599310 PPP2R1AP30153 589 aa22.03■■□□□ 1.12
SMIM7-217ENST00000599310 ATP6V1AP38606 617 aa22.02■■□□□ 1.12
SMIM7-217ENST00000599310 YY1P25490 414 aa22■■□□□ 1.11
SMIM7-217ENST00000599310 GAS2L2Q8NHY3 880 aa22■■□□□ 1.11
SMIM7-217ENST00000599310 ARXQ96QS3 562 aa22■■□□□ 1.11
SMIM7-217ENST00000599310 RBM42Q9BTD8 480 aaKnown RBP22■■□□□ 1.11
SMIM7-217ENST00000599310 TAF1LQ8IZX4 1826 aa21.99■■□□□ 1.11
SMIM7-217ENST00000599310 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
SMIM7-217ENST00000599310 NFATC2IPQ8NCF5 419 aa21.99■■□□□ 1.11
SMIM7-217ENST00000599310 C4BP0C0L5 1744 aa21.99■■□□□ 1.11
SMIM7-217ENST00000599310 MTHFSDQ2M296 383 aaKnown RBP21.98■■□□□ 1.11
SMIM7-217ENST00000599310 COL23A1Q86Y22 540 aaPredicted RBP21.98■■□□□ 1.11
SMIM7-217ENST00000599310 FHDC1Q9C0D6 1143 aaPredicted RBP21.98■■□□□ 1.11
SMIM7-217ENST00000599310 SYT17Q9BSW7 474 aa21.97■■□□□ 1.11
SMIM7-217ENST00000599310 SSFA2P28290 1259 aa21.96■■□□□ 1.11
SMIM7-217ENST00000599310 SLC52A2Q9HAB3 445 aa21.96■■□□□ 1.11
SMIM7-217ENST00000599310 SCN11AQ9UI33 1791 aa21.96■■□□□ 1.11
SMIM7-217ENST00000599310 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
SMIM7-217ENST00000599310 RNMTO43148 476 aaKnown RBP21.95■■□□□ 1.1
SMIM7-217ENST00000599310 U2AF1L5P0DN76 240 aaPredicted RBP21.95■■□□□ 1.1
SMIM7-217ENST00000599310 U2AF1Q01081 240 aaKnown RBP eCLIP21.95■■□□□ 1.1
SMIM7-217ENST00000599310 LINC00116Q8NCU8 138 aa21.95■■□□□ 1.1
SMIM7-217ENST00000599310 GNPATO15228 680 aa21.94■■□□□ 1.1
SMIM7-217ENST00000599310 ITPK1Q13572 414 aa21.94■■□□□ 1.1
SMIM7-217ENST00000599310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.93■■□□□ 1.1
SMIM7-217ENST00000599310 GNAT3A8MTJ3 354 aa21.93■■□□□ 1.1
SMIM7-217ENST00000599310 PHF14O94880 888 aa21.93■■□□□ 1.1
SMIM7-217ENST00000599310 NEFMP07197 916 aa21.93■■□□□ 1.1
SMIM7-217ENST00000599310 PRKAR2BP31323 418 aa21.93■■□□□ 1.1
SMIM7-217ENST00000599310 MAP3K5Q99683 1374 aa21.93■■□□□ 1.1
SMIM7-217ENST00000599310 PTCD1O75127 700 aaKnown RBP21.92■■□□□ 1.1
SMIM7-217ENST00000599310 FCHSD2O94868 740 aa21.92■■□□□ 1.1
SMIM7-217ENST00000599310 RALBP1Q15311 655 aa21.92■■□□□ 1.1
SMIM7-217ENST00000599310 RC3H1Q5TC82 1133 aaKnown RBP21.92■■□□□ 1.1
SMIM7-217ENST00000599310 LGR6Q9HBX8 967 aa21.92■■□□□ 1.1
SMIM7-217ENST00000599310 RTCBQ9Y3I0 505 aaKnown RBP21.92■■□□□ 1.1
SMIM7-217ENST00000599310 CHD4Q14839 1912 aa21.92■■□□□ 1.1
SMIM7-217ENST00000599310 MRC1P22897 1456 aa21.91■■□□□ 1.1
SMIM7-217ENST00000599310 DDX10Q13206 875 aaKnown RBP21.91■■□□□ 1.1
SMIM7-217ENST00000599310 RSPH6AQ9H0K4 717 aa21.91■■□□□ 1.1
SMIM7-217ENST00000599310 GOLGB1Q14789 3259 aaKnown RBP21.9■■□□□ 1.1
SMIM7-217ENST00000599310 TEFQ10587 303 aa21.9■■□□□ 1.1
SMIM7-217ENST00000599310 CNTNAP4Q9C0A0 1308 aa21.89■■□□□ 1.1
SMIM7-217ENST00000599310 KLHL34Q8N239 644 aa21.89■■□□□ 1.09
SMIM7-217ENST00000599310 UBR3Q6ZT12 1888 aa21.88■■□□□ 1.09
SMIM7-217ENST00000599310 ADRA2BP18089 450 aa21.88■■□□□ 1.09
SMIM7-217ENST00000599310 TTC5Q8N0Z6 440 aa21.88■■□□□ 1.09
SMIM7-217ENST00000599310 SLC4A9Q96Q91 983 aa21.88■■□□□ 1.09
SMIM7-217ENST00000599310 PNNQ9H307 717 aaKnown RBP21.88■■□□□ 1.09
SMIM7-217ENST00000599310 ADAMTS7Q9UKP4 1686 aa21.88■■□□□ 1.09
SMIM7-217ENST00000599310 TRAPPC3LQ5T215 181 aa21.87■■□□□ 1.09
SMIM7-217ENST00000599310 MSL1Q68DK7 614 aa21.87■■□□□ 1.09
SMIM7-217ENST00000599310 RTF1Q92541 710 aaKnown RBP21.87■■□□□ 1.09
SMIM7-217ENST00000599310 RPS6KA4O75676 772 aa21.85■■□□□ 1.09
SMIM7-217ENST00000599310 PHACTR3Q96KR7 559 aa21.85■■□□□ 1.09
SMIM7-217ENST00000599310 COL5A3P25940 1745 aaPredicted RBP21.84■■□□□ 1.09
SMIM7-217ENST00000599310 CICQ96RK0 1608 aaPredicted RBP21.84■■□□□ 1.09
SMIM7-217ENST00000599310 RFC4P35249 363 aa21.83■■□□□ 1.09
SMIM7-217ENST00000599310 CRKLP46109 303 aaKnown RBP21.83■■□□□ 1.09
SMIM7-217ENST00000599310 VSIG10Q8N0Z9 540 aa21.83■■□□□ 1.09
SMIM7-217ENST00000599310 VIRMAQ69YN4 1812 aaKnown RBP21.83■■□□□ 1.08
SMIM7-217ENST00000599310 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
SMIM7-217ENST00000599310 SLC39A6Q13433 755 aa21.82■■□□□ 1.08
SMIM7-217ENST00000599310 AMIGO3Q86WK7 504 aa21.82■■□□□ 1.08
SMIM7-217ENST00000599310 IL17REQ8NFR9 667 aa21.82■■□□□ 1.08
SMIM7-217ENST00000599310 NLGN1Q8N2Q7 840 aa21.81■■□□□ 1.08
SMIM7-217ENST00000599310 MYBBP1AQ9BQG0 1328 aaKnown RBP21.8■■□□□ 1.08
SMIM7-217ENST00000599310 CEMIPQ8WUJ3 1361 aa21.8■■□□□ 1.08
SMIM7-217ENST00000599310 SMIM5Q71RC9 77 aa21.8■■□□□ 1.08
SMIM7-217ENST00000599310 CD2APQ9Y5K6 639 aa21.8■■□□□ 1.08
SMIM7-217ENST00000599310 ZNF790Q6PG37 636 aa21.79■■□□□ 1.08
SMIM7-217ENST00000599310 DNAJC10Q8IXB1 793 aa21.79■■□□□ 1.08
SMIM7-217ENST00000599310 ARHGEF1Q92888 912 aaKnown RBP21.79■■□□□ 1.08
SMIM7-217ENST00000599310 TEX13AQ9BXU3 409 aaPredicted RBP21.79■■□□□ 1.08
SMIM7-217ENST00000599310 CCDC87Q9NVE4 849 aa21.79■■□□□ 1.08
SMIM7-217ENST00000599310 TJP1Q07157 1748 aa21.79■■□□□ 1.08
SMIM7-217ENST00000599310 MAPK8IP3Q9UPT6 1336 aa21.79■■□□□ 1.08
SMIM7-217ENST00000599310 STARD3NLO95772 234 aa21.78■■□□□ 1.08
SMIM7-217ENST00000599310 ZNF784Q8NCA9 323 aaPredicted RBP21.78■■□□□ 1.08
SMIM7-217ENST00000599310 KCPQ6ZWJ8 1503 aa21.78■■□□□ 1.08
SMIM7-217ENST00000599310 BTBD11A6QL63 1104 aa21.77■■□□□ 1.08
SMIM7-217ENST00000599310 GPR162Q16538 588 aa21.77■■□□□ 1.08
SMIM7-217ENST00000599310 CYP19A1P11511 503 aaPredicted RBP21.76■■□□□ 1.07
SMIM7-217ENST00000599310 NLGN2Q8NFZ4 835 aa21.76■■□□□ 1.07
SMIM7-217ENST00000599310 FMNL2Q96PY5 1086 aa21.76■■□□□ 1.07
SMIM7-217ENST00000599310 INTS5Q6P9B9 1019 aaKnown RBP21.75■■□□□ 1.07
SMIM7-217ENST00000599310 HEG1Q9ULI3 1381 aa21.74■■□□□ 1.07
SMIM7-217ENST00000599310 UBR2Q8IWV8 1755 aa21.74■■□□□ 1.07
SMIM7-217ENST00000599310 MMP10P09238 476 aa21.74■■□□□ 1.07
SMIM7-217ENST00000599310 ZPR1O75312 459 aa21.73■■□□□ 1.07
SMIM7-217ENST00000599310 MCM10Q7L590 875 aa21.73■■□□□ 1.07
SMIM7-217ENST00000599310 PELP1Q8IZL8 1130 aaKnown RBP21.73■■□□□ 1.07
SMIM7-217ENST00000599310 ZNF496Q96IT1 587 aaPredicted RBP21.73■■□□□ 1.07
SMIM7-217ENST00000599310 SIPA1L3O60292 1781 aaPredicted RBP21.73■■□□□ 1.07
SMIM7-217ENST00000599310 GYS1P13807 737 aa21.72■■□□□ 1.07
SMIM7-217ENST00000599310 NFE2L2Q16236 605 aa21.72■■□□□ 1.07
SMIM7-217ENST00000599310 NPM2Q86SE8 214 aaKnown RBP21.72■■□□□ 1.07
SMIM7-217ENST00000599310 PARP3Q9Y6F1 533 aa21.72■■□□□ 1.07
SMIM7-217ENST00000599310 USP42Q9H9J4 1324 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms