RNA–Protein interactions for RNA: ENST00000599255.5

EMP3-208, Transcript of epithelial membrane protein 3, humanhuman

TSL 3

Gene EMP3, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-208ENST00000599255 MRC1P22897 1456 aa18.15■□□□□ 0.5
EMP3-208ENST00000599255 BTBD11A6QL63 1104 aa18.15■□□□□ 0.5
EMP3-208ENST00000599255 TMEM57Q8N5G2 664 aa18.15■□□□□ 0.5
EMP3-208ENST00000599255 CCDC30Q5VVM6 783 aa18.14■□□□□ 0.49
EMP3-208ENST00000599255 KDM6AO15550 1401 aaPredicted RBP18.14■□□□□ 0.49
EMP3-208ENST00000599255 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
EMP3-208ENST00000599255 IL2RBP14784 551 aa18.13■□□□□ 0.49
EMP3-208ENST00000599255 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
EMP3-208ENST00000599255 ITPRIPQ8IWB1 547 aa18.13■□□□□ 0.49
EMP3-208ENST00000599255 DCAF5Q96JK2 942 aa18.13■□□□□ 0.49
EMP3-208ENST00000599255 PLCH1Q4KWH8 1693 aa18.12■□□□□ 0.49
EMP3-208ENST00000599255 LARP1Q6PKG0 1096 aaKnown RBP18.12■□□□□ 0.49
EMP3-208ENST00000599255 STK31Q9BXU1 1019 aa18.12■□□□□ 0.49
EMP3-208ENST00000599255 STRN4Q9NRL3 753 aa18.12■□□□□ 0.49
EMP3-208ENST00000599255 PCDH11XQ9BZA7 1347 aa18.12■□□□□ 0.49
EMP3-208ENST00000599255 PCDH11YQ9BZA8 1340 aa18.12■□□□□ 0.49
EMP3-208ENST00000599255 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
EMP3-208ENST00000599255 SLC4A2P04920 1241 aa18.11■□□□□ 0.49
EMP3-208ENST00000599255 ZCRB1Q8TBF4 217 aaKnown RBP18.11■□□□□ 0.49
EMP3-208ENST00000599255 SLC52A2Q9HAB3 445 aa18.11■□□□□ 0.49
EMP3-208ENST00000599255 BTG4Q9NY30 223 aa18.11■□□□□ 0.49
EMP3-208ENST00000599255 RGS12O14924 1447 aa18.1■□□□□ 0.49
EMP3-208ENST00000599255 HEG1Q9ULI3 1381 aa18.1■□□□□ 0.49
EMP3-208ENST00000599255 UBAP1LF5GYI3 381 aa18.1■□□□□ 0.49
EMP3-208ENST00000599255 CYP27B1O15528 508 aa18.1■□□□□ 0.49
EMP3-208ENST00000599255 PIP4K2BP78356 416 aa18.1■□□□□ 0.49
EMP3-208ENST00000599255 NRAPQ86VF7 1730 aa18.09■□□□□ 0.49
EMP3-208ENST00000599255 ZBTB40Q9NUA8 1239 aa18.09■□□□□ 0.49
EMP3-208ENST00000599255 WNK3Q9BYP7 1800 aa18.09■□□□□ 0.49
EMP3-208ENST00000599255 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.48
EMP3-208ENST00000599255 INTS3Q68E01 1043 aaKnown RBP18.08■□□□□ 0.48
EMP3-208ENST00000599255 RWDD1Q9H446 243 aaPredicted RBP18.08■□□□□ 0.48
EMP3-208ENST00000599255 PCDHB15Q9Y5E8 787 aa18.08■□□□□ 0.48
EMP3-208ENST00000599255 NWD2Q9ULI1 1742 aa18.08■□□□□ 0.48
EMP3-208ENST00000599255 IGHDP01880 384 aa18.07■□□□□ 0.48
EMP3-208ENST00000599255 HDGFL1Q5TGJ6 251 aa18.07■□□□□ 0.48
EMP3-208ENST00000599255 TSHZ2Q9NRE2 1034 aa18.07■□□□□ 0.48
EMP3-208ENST00000599255 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
EMP3-208ENST00000599255 ZBTB7BO15156 539 aaPredicted RBP18.06■□□□□ 0.48
EMP3-208ENST00000599255 KCNQ3O43525 872 aa18.06■□□□□ 0.48
EMP3-208ENST00000599255 DISP2A7MBM2 1401 aa18.06■□□□□ 0.48
EMP3-208ENST00000599255 PXDNLA1KZ92 1463 aa18.04■□□□□ 0.48
EMP3-208ENST00000599255 ERVV-2B6SEH9 535 aa18.04■□□□□ 0.48
EMP3-208ENST00000599255 GIGYF1O75420 1035 aaPredicted RBP18.04■□□□□ 0.48
EMP3-208ENST00000599255 HDAC1Q13547 482 aaPredicted RBP18.04■□□□□ 0.48
EMP3-208ENST00000599255 ZNF790Q6PG37 636 aa18.04■□□□□ 0.48
EMP3-208ENST00000599255 NFATC2IPQ8NCF5 419 aa18.04■□□□□ 0.48
EMP3-208ENST00000599255 PAPPAQ13219 1627 aa18.03■□□□□ 0.48
EMP3-208ENST00000599255 CABP4P57796 275 aa18.03■□□□□ 0.48
EMP3-208ENST00000599255 FLIIQ13045 1269 aa18.03■□□□□ 0.48
EMP3-208ENST00000599255 G2E3Q7L622 706 aa18.03■□□□□ 0.48
EMP3-208ENST00000599255 CCT4P50991 539 aaKnown RBP18.02■□□□□ 0.48
EMP3-208ENST00000599255 CERKQ8TCT0 537 aa18.02■□□□□ 0.48
EMP3-208ENST00000599255 JCADQ9P266 1359 aa18.02■□□□□ 0.47
EMP3-208ENST00000599255 THRAP3Q9Y2W1 955 aaKnown RBP18.01■□□□□ 0.47
EMP3-208ENST00000599255 C5P01031 1676 aa18.01■□□□□ 0.47
EMP3-208ENST00000599255 LAMB4A4D0S4 1761 aa18■□□□□ 0.47
EMP3-208ENST00000599255 UBR2Q8IWV8 1755 aa18■□□□□ 0.47
EMP3-208ENST00000599255 SLIT2O94813 1529 aa18■□□□□ 0.47
EMP3-208ENST00000599255 EIF2S2P20042 333 aaKnown RBP18■□□□□ 0.47
EMP3-208ENST00000599255 TTC5Q8N0Z6 440 aa18■□□□□ 0.47
EMP3-208ENST00000599255 NECTIN2Q92692 538 aa18■□□□□ 0.47
EMP3-208ENST00000599255 CDCA7Q9BWT1 371 aaPredicted RBP18■□□□□ 0.47
EMP3-208ENST00000599255 DBF4Q9UBU7 674 aaPredicted RBP18■□□□□ 0.47
EMP3-208ENST00000599255 LRP6O75581 1613 aa18■□□□□ 0.47
EMP3-208ENST00000599255 TOGARAM1Q9Y4F4 1720 aa17.99■□□□□ 0.47
EMP3-208ENST00000599255 ADAMTS2O95450 1211 aa17.99■□□□□ 0.47
EMP3-208ENST00000599255 FKBP5Q13451 457 aaPredicted RBP17.99■□□□□ 0.47
EMP3-208ENST00000599255 DDX54Q8TDD1 881 aaKnown RBP17.98■□□□□ 0.47
EMP3-208ENST00000599255 CHPF2Q9P2E5 772 aa17.98■□□□□ 0.47
EMP3-208ENST00000599255 USP35Q9P2H5 1018 aa17.98■□□□□ 0.47
EMP3-208ENST00000599255 SLC39A6Q13433 755 aa17.97■□□□□ 0.47
EMP3-208ENST00000599255 FMNL2Q96PY5 1086 aa17.97■□□□□ 0.47
EMP3-208ENST00000599255 SPATA31A1Q5TZJ5 1347 aa17.97■□□□□ 0.47
EMP3-208ENST00000599255 GLI3P10071 1580 aa17.96■□□□□ 0.47
EMP3-208ENST00000599255 NUTM2BA6NNL0 878 aaPredicted RBP17.96■□□□□ 0.47
EMP3-208ENST00000599255 NUTM2EB1AL46 878 aaPredicted RBP17.96■□□□□ 0.47
EMP3-208ENST00000599255 NUTM2AQ8IVF1 878 aaPredicted RBP17.96■□□□□ 0.47
EMP3-208ENST00000599255 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
EMP3-208ENST00000599255 TNS2Q63HR2 1409 aa17.96■□□□□ 0.47
EMP3-208ENST00000599255 SPATA31A6Q5VVP1 1343 aa17.96■□□□□ 0.46
EMP3-208ENST00000599255 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
EMP3-208ENST00000599255 SMC5Q8IY18 1101 aa17.95■□□□□ 0.46
EMP3-208ENST00000599255 ZNF496Q96IT1 587 aaPredicted RBP17.95■□□□□ 0.46
EMP3-208ENST00000599255 PHAXQ9H814 394 aaKnown RBP17.95■□□□□ 0.46
EMP3-208ENST00000599255 F6X3S4 739 aa17.94■□□□□ 0.46
EMP3-208ENST00000599255 EXOC5O00471 708 aa17.94■□□□□ 0.46
EMP3-208ENST00000599255 SLC4A10Q6U841 1118 aa17.94■□□□□ 0.46
EMP3-208ENST00000599255 DDX21Q9NR30 783 aaKnown RBP eCLIP17.94■□□□□ 0.46
EMP3-208ENST00000599255 SPATA31A5Q5VU36 1347 aa17.94■□□□□ 0.46
EMP3-208ENST00000599255 SPATA31A7Q8IWB4 1347 aa17.94■□□□□ 0.46
EMP3-208ENST00000599255 KCPQ6ZWJ8 1503 aa17.93■□□□□ 0.46
EMP3-208ENST00000599255 ATP10DQ9P241 1426 aa17.93■□□□□ 0.46
EMP3-208ENST00000599255 RPAP2Q8IXW5 612 aaPredicted RBP17.93■□□□□ 0.46
EMP3-208ENST00000599255 ITGB4P16144 1822 aa17.93■□□□□ 0.46
EMP3-208ENST00000599255 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
EMP3-208ENST00000599255 BARGINQ6ZT62 677 aa17.92■□□□□ 0.46
EMP3-208ENST00000599255 GCC1Q96CN9 775 aa17.92■□□□□ 0.46
EMP3-208ENST00000599255 PDZRN3Q9UPQ7 1066 aa17.92■□□□□ 0.46
EMP3-208ENST00000599255 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms