RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 HMGB2P26583 209 aaKnown RBP26.52■■□□□ 1.84
IRF3-222ENST00000599144 GPBP1L1Q9HC44 474 aaPredicted RBP26.52■■□□□ 1.84
IRF3-222ENST00000599144 MMP10P09238 476 aa26.51■■□□□ 1.83
IRF3-222ENST00000599144 RBM42Q9BTD8 480 aaKnown RBP26.51■■□□□ 1.83
IRF3-222ENST00000599144 ADCY9O60503 1353 aa26.5■■□□□ 1.83
IRF3-222ENST00000599144 KDRP35968 1356 aa26.48■■□□□ 1.83
IRF3-222ENST00000599144 PANK3Q9H999 370 aa26.47■■□□□ 1.83
IRF3-222ENST00000599144 HSPA5P11021 654 aaKnown RBP26.46■■□□□ 1.83
IRF3-222ENST00000599144 AEBP1Q8IUX7 1158 aa26.46■■□□□ 1.83
IRF3-222ENST00000599144 ZNF530Q6P9A1 599 aaPredicted RBP26.45■■□□□ 1.82
IRF3-222ENST00000599144 TRAPPC3LQ5T215 181 aa26.44■■□□□ 1.82
IRF3-222ENST00000599144 TIMELESSQ9UNS1 1208 aa26.44■■□□□ 1.82
IRF3-222ENST00000599144 RTCBQ9Y3I0 505 aaKnown RBP26.44■■□□□ 1.82
IRF3-222ENST00000599144 KDM6AO15550 1401 aaPredicted RBP26.44■■□□□ 1.82
IRF3-222ENST00000599144 ARHGEF1Q92888 912 aaKnown RBP26.43■■□□□ 1.82
IRF3-222ENST00000599144 PXDNLA1KZ92 1463 aa26.42■■□□□ 1.82
IRF3-222ENST00000599144 A0A0G2JLW4 131 aa26.42■■□□□ 1.82
IRF3-222ENST00000599144 ERVV-2B6SEH9 535 aa26.41■■□□□ 1.82
IRF3-222ENST00000599144 CABP4P57796 275 aa26.41■■□□□ 1.82
IRF3-222ENST00000599144 PLEKHO1Q53GL0 409 aaPredicted RBP26.41■■□□□ 1.82
IRF3-222ENST00000599144 DCAF5Q96JK2 942 aa26.41■■□□□ 1.82
IRF3-222ENST00000599144 CICQ96RK0 1608 aaPredicted RBP26.4■■□□□ 1.82
IRF3-222ENST00000599144 PTCD1O75127 700 aaKnown RBP26.4■■□□□ 1.82
IRF3-222ENST00000599144 BCS1LQ9Y276 419 aa26.4■■□□□ 1.82
IRF3-222ENST00000599144 GYS1P13807 737 aa26.38■■□□□ 1.81
IRF3-222ENST00000599144 EIF4G2P78344 907 aaKnown RBP eCLIP26.38■■□□□ 1.812e-7■■■■■ 34.3
IRF3-222ENST00000599144 HSP90AB1P08238 724 aaKnown RBP26.37■■□□□ 1.81
IRF3-222ENST00000599144 DPEP1P16444 411 aa26.37■■□□□ 1.81
IRF3-222ENST00000599144 MORC1Q86VD1 984 aa26.37■■□□□ 1.81
IRF3-222ENST00000599144 KIF3CO14782 793 aa26.36■■□□□ 1.81
IRF3-222ENST00000599144 RPS6KA4O75676 772 aa26.36■■□□□ 1.81
IRF3-222ENST00000599144 MTHFSP49914 203 aa26.36■■□□□ 1.81
IRF3-222ENST00000599144 NLGN1Q8N2Q7 840 aa26.36■■□□□ 1.81
IRF3-222ENST00000599144 SRP68Q9UHB9 627 aaKnown RBP26.36■■□□□ 1.81
IRF3-222ENST00000599144 CNTNAP4Q9C0A0 1308 aa26.36■■□□□ 1.81
IRF3-222ENST00000599144 RFC4P35249 363 aa26.35■■□□□ 1.81
IRF3-222ENST00000599144 RC3H1Q5TC82 1133 aaKnown RBP26.35■■□□□ 1.81
IRF3-222ENST00000599144 C10orf71Q711Q0 1435 aa26.35■■□□□ 1.81
IRF3-222ENST00000599144 HSPA6P17066 643 aa26.34■■□□□ 1.81
IRF3-222ENST00000599144 SULT6B1Q6IMI4 303 aa26.34■■□□□ 1.81
IRF3-222ENST00000599144 NFATC2IPQ8NCF5 419 aa26.34■■□□□ 1.81
IRF3-222ENST00000599144 AMOTQ4VCS5 1084 aa26.33■■□□□ 1.81
IRF3-222ENST00000599144 ARHGAP27Q6ZUM4 889 aa26.33■■□□□ 1.81
IRF3-222ENST00000599144 KIAA1551Q9HCM1 1747 aa26.32■■□□□ 1.8
IRF3-222ENST00000599144 TGFB2P61812 414 aa26.32■■□□□ 1.8
IRF3-222ENST00000599144 C1orf141Q5JVX7 400 aa26.32■■□□□ 1.8
IRF3-222ENST00000599144 CCDC87Q9NVE4 849 aa26.32■■□□□ 1.8
IRF3-222ENST00000599144 ADRA2BP18089 450 aa26.31■■□□□ 1.8
IRF3-222ENST00000599144 CRKLP46109 303 aaKnown RBP26.31■■□□□ 1.8
IRF3-222ENST00000599144 PARP3Q9Y6F1 533 aa26.31■■□□□ 1.8
IRF3-222ENST00000599144 PLEKHG2Q9H7P9 1386 aa26.31■■□□□ 1.8
IRF3-222ENST00000599144 N4BP2Q86UW6 1770 aaPredicted RBP26.3■■□□□ 1.8
IRF3-222ENST00000599144 FCHSD2O94868 740 aa26.3■■□□□ 1.8
IRF3-222ENST00000599144 FKBP8Q14318 412 aa26.29■■□□□ 1.8
IRF3-222ENST00000599144 CLSPNQ9HAW4 1339 aa26.29■■□□□ 1.8
IRF3-222ENST00000599144 IL13P35225 146 aa26.28■■□□□ 1.8
IRF3-222ENST00000599144 DDR1Q08345 913 aa26.28■■□□□ 1.8
IRF3-222ENST00000599144 CEP350Q5VT06 3117 aa26.28■■□□□ 1.8
IRF3-222ENST00000599144 C4AP0C0L4 1744 aa26.28■■□□□ 1.8
IRF3-222ENST00000599144 COL5A3P25940 1745 aaPredicted RBP26.28■■□□□ 1.8
IRF3-222ENST00000599144 KCNA3P22001 575 aa26.27■■□□□ 1.8
IRF3-222ENST00000599144 NMRK2Q9NPI5 230 aa26.26■■□□□ 1.79
IRF3-222ENST00000599144 DNAJC10Q8IXB1 793 aa26.25■■□□□ 1.79
IRF3-222ENST00000599144 LGR6Q9HBX8 967 aa26.25■■□□□ 1.79
IRF3-222ENST00000599144 USP42Q9H9J4 1324 aaKnown RBP26.24■■□□□ 1.79
IRF3-222ENST00000599144 KIF13BQ9NQT8 1826 aa26.24■■□□□ 1.79
IRF3-222ENST00000599144 IFFO2Q5TF58 517 aa26.24■■□□□ 1.79
IRF3-222ENST00000599144 INTS5Q6P9B9 1019 aaKnown RBP26.24■■□□□ 1.79
IRF3-222ENST00000599144 KNSTRNQ9Y448 316 aa26.24■■□□□ 1.79
IRF3-222ENST00000599144 ZNF831Q5JPB2 1677 aa26.23■■□□□ 1.79
IRF3-222ENST00000599144 CHRNA5P30532 468 aa26.23■■□□□ 1.79
IRF3-222ENST00000599144 MYH14Q7Z406 1995 aaKnown RBP26.23■■□□□ 1.79
IRF3-222ENST00000599144 HMOX1P09601 288 aa26.22■■□□□ 1.79
IRF3-222ENST00000599144 SLC39A6Q13433 755 aa26.22■■□□□ 1.79
IRF3-222ENST00000599144 C9orf131Q5VYM1 1079 aa26.22■■□□□ 1.79
IRF3-222ENST00000599144 TJP1Q07157 1748 aa26.2■■□□□ 1.79
IRF3-222ENST00000599144 AMER1Q5JTC6 1135 aaPredicted RBP26.19■■□□□ 1.78
IRF3-222ENST00000599144 USPL1Q5W0Q7 1092 aa26.19■■□□□ 1.78
IRF3-222ENST00000599144 SLC52A2Q9HAB3 445 aa26.19■■□□□ 1.78
IRF3-222ENST00000599144 PIM2Q9P1W9 311 aa26.19■■□□□ 1.78
IRF3-222ENST00000599144 AKAP4Q5JQC9 854 aa26.18■■□□□ 1.78
IRF3-222ENST00000599144 CCER1Q8TC90 406 aaPredicted RBP26.18■■□□□ 1.78
IRF3-222ENST00000599144 POLRMTO00411 1230 aaKnown RBP26.17■■□□□ 1.78
IRF3-222ENST00000599144 RNMTO43148 476 aaKnown RBP26.16■■□□□ 1.78
IRF3-222ENST00000599144 CNGB1Q14028 1251 aaPredicted RBP26.16■■□□□ 1.78
IRF3-222ENST00000599144 DALRD3Q5D0E6 543 aaKnown RBP26.16■■□□□ 1.78
IRF3-222ENST00000599144 TOMM70O94826 608 aa26.15■■□□□ 1.78
IRF3-222ENST00000599144 TM4SF1P30408 202 aa26.15■■□□□ 1.78
IRF3-222ENST00000599144 SOS1Q07889 1333 aaPredicted RBP26.14■■□□□ 1.78
IRF3-222ENST00000599144 MTHFSDQ2M296 383 aaKnown RBP26.14■■□□□ 1.78
IRF3-222ENST00000599144 ZBTB1Q9Y2K1 713 aa26.14■■□□□ 1.78
IRF3-222ENST00000599144 KIF7Q2M1P5 1343 aa26.14■■□□□ 1.77
IRF3-222ENST00000599144 ZPR1O75312 459 aa26.13■■□□□ 1.77
IRF3-222ENST00000599144 CYP19A1P11511 503 aaPredicted RBP26.13■■□□□ 1.77
IRF3-222ENST00000599144 CC2D1BQ5T0F9 858 aaKnown RBP26.13■■□□□ 1.77
IRF3-222ENST00000599144 RNF181Q9P0P0 153 aa26.13■■□□□ 1.77
IRF3-222ENST00000599144 HTRA3P83110 453 aa26.12■■□□□ 1.77
IRF3-222ENST00000599144 KCPQ6ZWJ8 1503 aa26.12■■□□□ 1.77
IRF3-222ENST00000599144 NFIXQ14938 502 aa26.11■■□□□ 1.77
IRF3-222ENST00000599144 ADAMTS7Q9UKP4 1686 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms