RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 C1orf141Q5JVX7 400 aa23.82■■□□□ 1.4
HOMER3-210ENST00000599097 ASAP1Q9ULH1 1129 aa23.81■■□□□ 1.4
HOMER3-210ENST00000599097 ZNF831Q5JPB2 1677 aa23.8■■□□□ 1.4
HOMER3-210ENST00000599097 ZNF530Q6P9A1 599 aaPredicted RBP23.8■■□□□ 1.4
HOMER3-210ENST00000599097 LINC00116Q8NCU8 138 aa23.8■■□□□ 1.4
HOMER3-210ENST00000599097 GIGYF1O75420 1035 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-210ENST00000599097 ADRA2BP18089 450 aa23.78■■□□□ 1.4
HOMER3-210ENST00000599097 ATG3Q9NT62 314 aa23.78■■□□□ 1.4
HOMER3-210ENST00000599097 RTCBQ9Y3I0 505 aaKnown RBP23.78■■□□□ 1.4
HOMER3-210ENST00000599097 CABP4P57796 275 aa23.77■■□□□ 1.4
HOMER3-210ENST00000599097 KDRP35968 1356 aa23.77■■□□□ 1.4
HOMER3-210ENST00000599097 YBX3P16989 372 aaKnown RBP eCLIP23.76■■□□□ 1.39
HOMER3-210ENST00000599097 MTHFSP49914 203 aa23.75■■□□□ 1.39
HOMER3-210ENST00000599097 C1QTNF8P60827 252 aa23.75■■□□□ 1.39
HOMER3-210ENST00000599097 ITPK1Q13572 414 aa23.75■■□□□ 1.39
HOMER3-210ENST00000599097 RC3H1Q5TC82 1133 aaKnown RBP23.75■■□□□ 1.39
HOMER3-210ENST00000599097 RBM42Q9BTD8 480 aaKnown RBP23.75■■□□□ 1.39
HOMER3-210ENST00000599097 TRAPPC3LQ5T215 181 aa23.74■■□□□ 1.39
HOMER3-210ENST00000599097 NLGN1Q8N2Q7 840 aa23.74■■□□□ 1.39
HOMER3-210ENST00000599097 CNTNAP4Q9C0A0 1308 aa23.73■■□□□ 1.39
HOMER3-210ENST00000599097 KDM6AO15550 1401 aaPredicted RBP23.71■■□□□ 1.39
HOMER3-210ENST00000599097 SULT6B1Q6IMI4 303 aa23.71■■□□□ 1.39
HOMER3-210ENST00000599097 GOLGB1Q14789 3259 aaKnown RBP23.7■■□□□ 1.38
HOMER3-210ENST00000599097 AMIGO3Q86WK7 504 aa23.7■■□□□ 1.38
HOMER3-210ENST00000599097 SENP3-EIF4A1A0A087X0R7 540 aa23.69■■□□□ 1.38
HOMER3-210ENST00000599097 MMP10P09238 476 aa23.69■■□□□ 1.38
HOMER3-210ENST00000599097 RFC4P35249 363 aa23.69■■□□□ 1.38
HOMER3-210ENST00000599097 COL5A3P25940 1745 aaPredicted RBP23.68■■□□□ 1.38
HOMER3-210ENST00000599097 RPS6KA4O75676 772 aa23.67■■□□□ 1.38
HOMER3-210ENST00000599097 AMER1Q5JTC6 1135 aaPredicted RBP23.67■■□□□ 1.38
HOMER3-210ENST00000599097 AEBP1Q8IUX7 1158 aa23.67■■□□□ 1.38
HOMER3-210ENST00000599097 KIF7Q2M1P5 1343 aa23.66■■□□□ 1.38
HOMER3-210ENST00000599097 IL13P35225 146 aa23.66■■□□□ 1.38
HOMER3-210ENST00000599097 TGFB2P61812 414 aa23.66■■□□□ 1.38
HOMER3-210ENST00000599097 AKAP4Q5JQC9 854 aa23.66■■□□□ 1.38
HOMER3-210ENST00000599097 CCDC87Q9NVE4 849 aa23.66■■□□□ 1.38
HOMER3-210ENST00000599097 ATP10DQ9P241 1426 aa23.65■■□□□ 1.38
HOMER3-210ENST00000599097 CICQ96RK0 1608 aaPredicted RBP23.64■■□□□ 1.38
HOMER3-210ENST00000599097 GPBP1L1Q9HC44 474 aaPredicted RBP23.64■■□□□ 1.37
HOMER3-210ENST00000599097 PARP3Q9Y6F1 533 aa23.64■■□□□ 1.37
HOMER3-210ENST00000599097 PTCD1O75127 700 aaKnown RBP23.63■■□□□ 1.37
HOMER3-210ENST00000599097 SMIM5Q71RC9 77 aa23.63■■□□□ 1.37
HOMER3-210ENST00000599097 NFATC2IPQ8NCF5 419 aa23.63■■□□□ 1.37
HOMER3-210ENST00000599097 ARHGEF1Q92888 912 aaKnown RBP23.63■■□□□ 1.37
HOMER3-210ENST00000599097 SLC4A9Q96Q91 983 aa23.62■■□□□ 1.37
HOMER3-210ENST00000599097 SCN11AQ9UI33 1791 aa23.62■■□□□ 1.37
HOMER3-210ENST00000599097 KIF13BQ9NQT8 1826 aa23.61■■□□□ 1.37
HOMER3-210ENST00000599097 C10orf71Q711Q0 1435 aa23.61■■□□□ 1.37
HOMER3-210ENST00000599097 ADCY9O60503 1353 aa23.61■■□□□ 1.37
HOMER3-210ENST00000599097 CRKLP46109 303 aaKnown RBP23.6■■□□□ 1.37
HOMER3-210ENST00000599097 C4AP0C0L4 1744 aa23.59■■□□□ 1.37
HOMER3-210ENST00000599097 DIAPH1O60610 1272 aaKnown RBP23.59■■□□□ 1.37
HOMER3-210ENST00000599097 GYS1P13807 737 aa23.59■■□□□ 1.37
HOMER3-210ENST00000599097 SLC52A2Q9HAB3 445 aa23.59■■□□□ 1.37
HOMER3-210ENST00000599097 NPC1L1Q9UHC9 1359 aa23.59■■□□□ 1.37
HOMER3-210ENST00000599097 PXDNLA1KZ92 1463 aa23.59■■□□□ 1.37
HOMER3-210ENST00000599097 MRC1P22897 1456 aa23.58■■□□□ 1.37
HOMER3-210ENST00000599097 USP42Q9H9J4 1324 aaKnown RBP23.56■■□□□ 1.36
HOMER3-210ENST00000599097 TJP1Q07157 1748 aa23.54■■□□□ 1.36
HOMER3-210ENST00000599097 ZPR1O75312 459 aa23.54■■□□□ 1.36
HOMER3-210ENST00000599097 BCS1LQ9Y276 419 aa23.54■■□□□ 1.36
HOMER3-210ENST00000599097 MYH14Q7Z406 1995 aaKnown RBP23.53■■□□□ 1.36
HOMER3-210ENST00000599097 PER1O15534 1290 aaPredicted RBP23.53■■□□□ 1.36
HOMER3-210ENST00000599097 RNMTO43148 476 aaKnown RBP23.53■■□□□ 1.36
HOMER3-210ENST00000599097 HMOX1P09601 288 aa23.53■■□□□ 1.36
HOMER3-210ENST00000599097 CC2D1BQ5T0F9 858 aaKnown RBP23.53■■□□□ 1.36
HOMER3-210ENST00000599097 WWC3Q9ULE0 1092 aa23.53■■□□□ 1.36
HOMER3-210ENST00000599097 VSIG10Q8N0Z9 540 aa23.52■■□□□ 1.36
HOMER3-210ENST00000599097 A0A0G2JLW4 131 aa23.5■■□□□ 1.35
HOMER3-210ENST00000599097 TTC5Q8N0Z6 440 aa23.5■■□□□ 1.35
HOMER3-210ENST00000599097 GAS2L2Q8NHY3 880 aa23.5■■□□□ 1.35
HOMER3-210ENST00000599097 FCHSD2O94868 740 aa23.49■■□□□ 1.35
HOMER3-210ENST00000599097 CFAP53Q96M91 514 aa23.49■■□□□ 1.35
HOMER3-210ENST00000599097 PIM2Q9P1W9 311 aa23.49■■□□□ 1.35
HOMER3-210ENST00000599097 KIAA1551Q9HCM1 1747 aa23.49■■□□□ 1.35
HOMER3-210ENST00000599097 N4BP2Q86UW6 1770 aaPredicted RBP23.49■■□□□ 1.35
HOMER3-210ENST00000599097 ADAMTS7Q9UKP4 1686 aa23.48■■□□□ 1.35
HOMER3-210ENST00000599097 DPEP1P16444 411 aa23.48■■□□□ 1.35
HOMER3-210ENST00000599097 MTHFSDQ2M296 383 aaKnown RBP23.48■■□□□ 1.35
HOMER3-210ENST00000599097 DNAJC10Q8IXB1 793 aa23.48■■□□□ 1.35
HOMER3-210ENST00000599097 ZNF526Q8TF50 670 aaPredicted RBP23.48■■□□□ 1.35
HOMER3-210ENST00000599097 LGR6Q9HBX8 967 aa23.48■■□□□ 1.35
HOMER3-210ENST00000599097 TEFQ10587 303 aa23.47■■□□□ 1.35
HOMER3-210ENST00000599097 INTS5Q6P9B9 1019 aaKnown RBP23.47■■□□□ 1.35
HOMER3-210ENST00000599097 SOS1Q07889 1333 aaPredicted RBP23.47■■□□□ 1.35
HOMER3-210ENST00000599097 U2SURPO15042 1029 aaKnown RBP23.46■■□□□ 1.35
HOMER3-210ENST00000599097 STARD3NLO95772 234 aa23.46■■□□□ 1.35
HOMER3-210ENST00000599097 CYP19A1P11511 503 aaPredicted RBP23.46■■□□□ 1.35
HOMER3-210ENST00000599097 COL15A1P39059 1388 aa23.46■■□□□ 1.35
HOMER3-210ENST00000599097 FKBP8Q14318 412 aa23.46■■□□□ 1.35
HOMER3-210ENST00000599097 ARHGAP27Q6ZUM4 889 aa23.46■■□□□ 1.35
HOMER3-210ENST00000599097 SRP68Q9UHB9 627 aaKnown RBP23.46■■□□□ 1.35
HOMER3-210ENST00000599097 VIRMAQ69YN4 1812 aaKnown RBP23.45■■□□□ 1.34
HOMER3-210ENST00000599097 KCPQ6ZWJ8 1503 aa23.45■■□□□ 1.34
HOMER3-210ENST00000599097 DALRD3Q5D0E6 543 aaKnown RBP23.45■■□□□ 1.34
HOMER3-210ENST00000599097 TEX13AQ9BXU3 409 aaPredicted RBP23.45■■□□□ 1.34
HOMER3-210ENST00000599097 GNAT3A8MTJ3 354 aa23.44■■□□□ 1.34
HOMER3-210ENST00000599097 NARFQ9UHQ1 456 aa23.44■■□□□ 1.34
HOMER3-210ENST00000599097 ARFGEF1Q9Y6D6 1849 aa23.44■■□□□ 1.34
HOMER3-210ENST00000599097 COL3A1P02461 1466 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms