RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 AMOTQ4VCS5 1084 aa31.18■■■□□ 2.58
CCDC61-207ENST00000599044 ERVV-2B6SEH9 535 aa31.17■■■□□ 2.58
CCDC61-207ENST00000599044 PHF14O94880 888 aa31.17■■■□□ 2.58
CCDC61-207ENST00000599044 ATP6V1AP38606 617 aa31.17■■■□□ 2.58
CCDC61-207ENST00000599044 FLAD1Q8NFF5 587 aa31.17■■■□□ 2.58
CCDC61-207ENST00000599044 SLC4A9Q96Q91 983 aa31.16■■■□□ 2.58
CCDC61-207ENST00000599044 KDRP35968 1356 aa31.16■■■□□ 2.58
CCDC61-207ENST00000599044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.15■■■□□ 2.58
CCDC61-207ENST00000599044 HMGB2P26583 209 aaKnown RBP31.15■■■□□ 2.58
CCDC61-207ENST00000599044 HSP90AB1P08238 724 aaKnown RBP31.14■■■□□ 2.58
CCDC61-207ENST00000599044 UBR3Q6ZT12 1888 aa31.14■■■□□ 2.58
CCDC61-207ENST00000599044 CNGB1Q14028 1251 aaPredicted RBP31.13■■■□□ 2.57
CCDC61-207ENST00000599044 GOLGB1Q14789 3259 aaKnown RBP31.13■■■□□ 2.57
CCDC61-207ENST00000599044 CABP4P57796 275 aa31.11■■■□□ 2.57
CCDC61-207ENST00000599044 GPR162Q16538 588 aa31.11■■■□□ 2.57
CCDC61-207ENST00000599044 ZNF784Q8NCA9 323 aaPredicted RBP31.11■■■□□ 2.57
CCDC61-207ENST00000599044 RBM42Q9BTD8 480 aaKnown RBP31.1■■■□□ 2.57
CCDC61-207ENST00000599044 GNPATO15228 680 aa31.09■■■□□ 2.57
CCDC61-207ENST00000599044 HMOX1P09601 288 aa31.09■■■□□ 2.57
CCDC61-207ENST00000599044 SSFA2P28290 1259 aa31.09■■■□□ 2.57
CCDC61-207ENST00000599044 C1orf141Q5JVX7 400 aa31.09■■■□□ 2.57
CCDC61-207ENST00000599044 PELP1Q8IZL8 1130 aaKnown RBP31.07■■■□□ 2.56
CCDC61-207ENST00000599044 NFATC2IPQ8NCF5 419 aa31.07■■■□□ 2.56
CCDC61-207ENST00000599044 DIAPH1O60610 1272 aaKnown RBP31.03■■■□□ 2.56
CCDC61-207ENST00000599044 NPC1L1Q9UHC9 1359 aa31.03■■■□□ 2.56
CCDC61-207ENST00000599044 PTCD1O75127 700 aaKnown RBP31.02■■■□□ 2.56
CCDC61-207ENST00000599044 YBX3P16989 372 aaKnown RBP eCLIP31.02■■■□□ 2.56
CCDC61-207ENST00000599044 LGR6Q9HBX8 967 aa31.02■■■□□ 2.56
CCDC61-207ENST00000599044 AKAP4Q5JQC9 854 aa31.01■■■□□ 2.55
CCDC61-207ENST00000599044 CD2APQ9Y5K6 639 aa31■■■□□ 2.55
CCDC61-207ENST00000599044 MTHFSDQ2M296 383 aaKnown RBP30.99■■■□□ 2.55
CCDC61-207ENST00000599044 ZNF831Q5JPB2 1677 aa30.99■■■□□ 2.55
CCDC61-207ENST00000599044 COL3A1P02461 1466 aaPredicted RBP30.98■■■□□ 2.55
CCDC61-207ENST00000599044 RC3H1Q5TC82 1133 aaKnown RBP30.97■■■□□ 2.55
CCDC61-207ENST00000599044 RTCBQ9Y3I0 505 aaKnown RBP30.97■■■□□ 2.55
CCDC61-207ENST00000599044 TRAPPC3LQ5T215 181 aa30.96■■■□□ 2.55
CCDC61-207ENST00000599044 ARHGEF1Q92888 912 aaKnown RBP30.96■■■□□ 2.55
CCDC61-207ENST00000599044 CNTNAP4Q9C0A0 1308 aa30.96■■■□□ 2.55
CCDC61-207ENST00000599044 COL5A3P25940 1745 aaPredicted RBP30.95■■■□□ 2.55
CCDC61-207ENST00000599044 SCN11AQ9UI33 1791 aa30.95■■■□□ 2.55
CCDC61-207ENST00000599044 RNMTO43148 476 aaKnown RBP30.94■■■□□ 2.54
CCDC61-207ENST00000599044 SLC52A2Q9HAB3 445 aa30.94■■■□□ 2.54
CCDC61-207ENST00000599044 RPS6KA4O75676 772 aa30.93■■■□□ 2.54
CCDC61-207ENST00000599044 U2SURPO15042 1029 aaKnown RBP30.91■■■□□ 2.54
CCDC61-207ENST00000599044 MMP10P09238 476 aa30.91■■■□□ 2.54
CCDC61-207ENST00000599044 CRKLP46109 303 aaKnown RBP30.9■■■□□ 2.54
CCDC61-207ENST00000599044 SLC39A6Q13433 755 aa30.9■■■□□ 2.54
CCDC61-207ENST00000599044 MYH14Q7Z406 1995 aaKnown RBP30.89■■■□□ 2.54
CCDC61-207ENST00000599044 WWC3Q9ULE0 1092 aa30.89■■■□□ 2.54
CCDC61-207ENST00000599044 TJP1Q07157 1748 aa30.88■■■□□ 2.53
CCDC61-207ENST00000599044 GYS1P13807 737 aa30.87■■■□□ 2.53
CCDC61-207ENST00000599044 ADRA2BP18089 450 aa30.87■■■□□ 2.53
CCDC61-207ENST00000599044 MRC1P22897 1456 aa30.87■■■□□ 2.53
CCDC61-207ENST00000599044 GRIN3BO60391 1043 aa30.86■■■□□ 2.53
CCDC61-207ENST00000599044 RFC4P35249 363 aa30.86■■■□□ 2.53
CCDC61-207ENST00000599044 INTS5Q6P9B9 1019 aaKnown RBP30.86■■■□□ 2.53
CCDC61-207ENST00000599044 DNAJC10Q8IXB1 793 aa30.86■■■□□ 2.53
CCDC61-207ENST00000599044 NLGN1Q8N2Q7 840 aa30.85■■■□□ 2.53
CCDC61-207ENST00000599044 ADAMTS7Q9UKP4 1686 aa30.84■■■□□ 2.53
CCDC61-207ENST00000599044 KIF13BQ9NQT8 1826 aa30.83■■■□□ 2.53
CCDC61-207ENST00000599044 SRP68Q9UHB9 627 aaKnown RBP30.83■■■□□ 2.53
CCDC61-207ENST00000599044 CICQ96RK0 1608 aaPredicted RBP30.81■■■□□ 2.52
CCDC61-207ENST00000599044 IL17REQ8NFR9 667 aa30.81■■■□□ 2.52
CCDC61-207ENST00000599044 VIRMAQ69YN4 1812 aaKnown RBP30.81■■■□□ 2.52
CCDC61-207ENST00000599044 KCPQ6ZWJ8 1503 aa30.81■■■□□ 2.52
CCDC61-207ENST00000599044 C4AP0C0L4 1744 aa30.81■■■□□ 2.52
CCDC61-207ENST00000599044 PPP2R1AP30153 589 aa30.8■■■□□ 2.52
CCDC61-207ENST00000599044 PHACTR3Q96KR7 559 aa30.8■■■□□ 2.52
CCDC61-207ENST00000599044 CYP19A1P11511 503 aaPredicted RBP30.79■■■□□ 2.52
CCDC61-207ENST00000599044 C1QTNF8P60827 252 aa30.78■■■□□ 2.52
CCDC61-207ENST00000599044 KIAA1551Q9HCM1 1747 aa30.78■■■□□ 2.52
CCDC61-207ENST00000599044 FKBP8Q14318 412 aa30.77■■■□□ 2.52
CCDC61-207ENST00000599044 CCDC87Q9NVE4 849 aa30.77■■■□□ 2.52
CCDC61-207ENST00000599044 USP42Q9H9J4 1324 aaKnown RBP30.76■■■□□ 2.52
CCDC61-207ENST00000599044 CFAP53Q96M91 514 aa30.76■■■□□ 2.51
CCDC61-207ENST00000599044 RSPH6AQ9H0K4 717 aa30.76■■■□□ 2.51
CCDC61-207ENST00000599044 GNAT3A8MTJ3 354 aa30.75■■■□□ 2.51
CCDC61-207ENST00000599044 PRKAR2BP31323 418 aa30.75■■■□□ 2.51
CCDC61-207ENST00000599044 GAS2L2Q8NHY3 880 aa30.75■■■□□ 2.51
CCDC61-207ENST00000599044 PXDNLA1KZ92 1463 aa30.75■■■□□ 2.51
CCDC61-207ENST00000599044 A0A0G2JLW4 131 aa30.74■■■□□ 2.51
CCDC61-207ENST00000599044 SOS1Q07889 1333 aaPredicted RBP30.73■■■□□ 2.51
CCDC61-207ENST00000599044 C10orf71Q711Q0 1435 aa30.73■■■□□ 2.51
CCDC61-207ENST00000599044 PARP3Q9Y6F1 533 aa30.73■■■□□ 2.51
CCDC61-207ENST00000599044 DDR1Q08345 913 aa30.72■■■□□ 2.51
CCDC61-207ENST00000599044 ZBTB1Q9Y2K1 713 aa30.72■■■□□ 2.51
CCDC61-207ENST00000599044 N4BP2Q86UW6 1770 aaPredicted RBP30.71■■■□□ 2.51
CCDC61-207ENST00000599044 GIGYF1O75420 1035 aaPredicted RBP30.71■■■□□ 2.51
CCDC61-207ENST00000599044 TGFB2P61812 414 aa30.7■■■□□ 2.51
CCDC61-207ENST00000599044 VSIG10Q8N0Z9 540 aa30.7■■■□□ 2.51
CCDC61-207ENST00000599044 U2AF1L5P0DN76 240 aaPredicted RBP30.69■■■□□ 2.5
CCDC61-207ENST00000599044 U2AF1Q01081 240 aaKnown RBP eCLIP30.69■■■□□ 2.5
CCDC61-207ENST00000599044 TEFQ10587 303 aa30.69■■■□□ 2.5
CCDC61-207ENST00000599044 USPL1Q5W0Q7 1092 aa30.69■■■□□ 2.5
CCDC61-207ENST00000599044 ZNF496Q96IT1 587 aaPredicted RBP30.69■■■□□ 2.5
CCDC61-207ENST00000599044 UBR2Q8IWV8 1755 aa30.69■■■□□ 2.5
CCDC61-207ENST00000599044 ADCY9O60503 1353 aa30.68■■■□□ 2.5
CCDC61-207ENST00000599044 BRCA1P38398 1863 aaKnown RBP30.68■■■□□ 2.5
CCDC61-207ENST00000599044 ATP10DQ9P241 1426 aa30.68■■■□□ 2.5
CCDC61-207ENST00000599044 DPEP1P16444 411 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms