RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 NLGN2Q8NFZ4 835 aa25.04■■□□□ 1.6
SNRPA-205ENST00000598923 AK7Q96M32 723 aa25.04■■□□□ 1.6
SNRPA-205ENST00000598923 LINC00116Q8NCU8 138 aa25.03■■□□□ 1.6
SNRPA-205ENST00000598923 ATG3Q9NT62 314 aa25.03■■□□□ 1.6
SNRPA-205ENST00000598923 HMOX1P09601 288 aa25.02■■□□□ 1.6
SNRPA-205ENST00000598923 GOLGB1Q14789 3259 aaKnown RBP25.01■■□□□ 1.59
SNRPA-205ENST00000598923 ERVV-2B6SEH9 535 aa25.01■■□□□ 1.59
SNRPA-205ENST00000598923 GPR162Q16538 588 aa25.01■■□□□ 1.59
SNRPA-205ENST00000598923 U2SURPO15042 1029 aaKnown RBP25■■□□□ 1.59
SNRPA-205ENST00000598923 PPP2R1AP30153 589 aa25■■□□□ 1.59
SNRPA-205ENST00000598923 ITPK1Q13572 414 aa25■■□□□ 1.59
SNRPA-205ENST00000598923 AMOTQ4VCS5 1084 aa25■■□□□ 1.59
SNRPA-205ENST00000598923 DCAF5Q96JK2 942 aa25■■□□□ 1.59
SNRPA-205ENST00000598923 KDM6AO15550 1401 aaPredicted RBP25■■□□□ 1.59
SNRPA-205ENST00000598923 HSP90AB1P08238 724 aaKnown RBP24.99■■□□□ 1.59
SNRPA-205ENST00000598923 COL5A3P25940 1745 aaPredicted RBP24.99■■□□□ 1.59
SNRPA-205ENST00000598923 KDRP35968 1356 aa24.99■■□□□ 1.59
SNRPA-205ENST00000598923 ZNF530Q6P9A1 599 aaPredicted RBP24.99■■□□□ 1.59
SNRPA-205ENST00000598923 SMIM5Q71RC9 77 aa24.99■■□□□ 1.59
SNRPA-205ENST00000598923 CFAP53Q96M91 514 aa24.99■■□□□ 1.59
SNRPA-205ENST00000598923 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.98■■□□□ 1.59
SNRPA-205ENST00000598923 SSFA2P28290 1259 aa24.98■■□□□ 1.59
SNRPA-205ENST00000598923 ATP6V1AP38606 617 aa24.98■■□□□ 1.59
SNRPA-205ENST00000598923 ZNF784Q8NCA9 323 aaPredicted RBP24.98■■□□□ 1.59
SNRPA-205ENST00000598923 SCN11AQ9UI33 1791 aa24.97■■□□□ 1.59
SNRPA-205ENST00000598923 PHF14O94880 888 aa24.96■■□□□ 1.59
SNRPA-205ENST00000598923 C1orf141Q5JVX7 400 aa24.95■■□□□ 1.58
SNRPA-205ENST00000598923 SLC4A9Q96Q91 983 aa24.95■■□□□ 1.58
SNRPA-205ENST00000598923 CD2APQ9Y5K6 639 aa24.95■■□□□ 1.58
SNRPA-205ENST00000598923 VIRMAQ69YN4 1812 aaKnown RBP24.94■■□□□ 1.58
SNRPA-205ENST00000598923 PELP1Q8IZL8 1130 aaKnown RBP24.93■■□□□ 1.58
SNRPA-205ENST00000598923 GNPATO15228 680 aa24.92■■□□□ 1.58
SNRPA-205ENST00000598923 YBX3P16989 372 aaKnown RBP eCLIP24.92■■□□□ 1.58
SNRPA-205ENST00000598923 MYH14Q7Z406 1995 aaKnown RBP24.92■■□□□ 1.58
SNRPA-205ENST00000598923 CABP4P57796 275 aa24.91■■□□□ 1.58
SNRPA-205ENST00000598923 NUDCQ9Y266 331 aa24.9■■□□□ 1.58
SNRPA-205ENST00000598923 CICQ96RK0 1608 aaPredicted RBP24.9■■□□□ 1.58
SNRPA-205ENST00000598923 RBM42Q9BTD8 480 aaKnown RBP24.89■■□□□ 1.58
SNRPA-205ENST00000598923 COL3A1P02461 1466 aaPredicted RBP24.89■■□□□ 1.57
SNRPA-205ENST00000598923 RC3H1Q5TC82 1133 aaKnown RBP24.88■■□□□ 1.57
SNRPA-205ENST00000598923 GRIN3BO60391 1043 aa24.87■■□□□ 1.57
SNRPA-205ENST00000598923 C4AP0C0L4 1744 aa24.86■■□□□ 1.57
SNRPA-205ENST00000598923 TJP1Q07157 1748 aa24.86■■□□□ 1.57
SNRPA-205ENST00000598923 KIF13BQ9NQT8 1826 aa24.86■■□□□ 1.57
SNRPA-205ENST00000598923 U2AF1L5P0DN76 240 aaPredicted RBP24.86■■□□□ 1.57
SNRPA-205ENST00000598923 U2AF1Q01081 240 aaKnown RBP eCLIP24.86■■□□□ 1.57
SNRPA-205ENST00000598923 MTHFSDQ2M296 383 aaKnown RBP24.86■■□□□ 1.57
SNRPA-205ENST00000598923 NFATC2IPQ8NCF5 419 aa24.86■■□□□ 1.57
SNRPA-205ENST00000598923 RTCBQ9Y3I0 505 aaKnown RBP24.86■■□□□ 1.57
SNRPA-205ENST00000598923 CNTNAP4Q9C0A0 1308 aa24.86■■□□□ 1.57
SNRPA-205ENST00000598923 AKAP4Q5JQC9 854 aa24.85■■□□□ 1.57
SNRPA-205ENST00000598923 ADAMTS7Q9UKP4 1686 aa24.85■■□□□ 1.57
SNRPA-205ENST00000598923 TRAPPC3LQ5T215 181 aa24.84■■□□□ 1.57
SNRPA-205ENST00000598923 RALBP1Q15311 655 aa24.83■■□□□ 1.57
SNRPA-205ENST00000598923 KIAA1551Q9HCM1 1747 aa24.83■■□□□ 1.57
SNRPA-205ENST00000598923 RPS6KA4O75676 772 aa24.82■■□□□ 1.56
SNRPA-205ENST00000598923 ADRA2BP18089 450 aa24.82■■□□□ 1.56
SNRPA-205ENST00000598923 LGR6Q9HBX8 967 aa24.82■■□□□ 1.56
SNRPA-205ENST00000598923 MRC1P22897 1456 aa24.82■■□□□ 1.56
SNRPA-205ENST00000598923 PTCD1O75127 700 aaKnown RBP24.81■■□□□ 1.56
SNRPA-205ENST00000598923 PRKAR2BP31323 418 aa24.81■■□□□ 1.56
SNRPA-205ENST00000598923 ARHGEF1Q92888 912 aaKnown RBP24.81■■□□□ 1.56
SNRPA-205ENST00000598923 MMP10P09238 476 aa24.79■■□□□ 1.56
SNRPA-205ENST00000598923 RSPH6AQ9H0K4 717 aa24.79■■□□□ 1.56
SNRPA-205ENST00000598923 SLC52A2Q9HAB3 445 aa24.79■■□□□ 1.56
SNRPA-205ENST00000598923 RNMTO43148 476 aaKnown RBP24.78■■□□□ 1.56
SNRPA-205ENST00000598923 NLGN1Q8N2Q7 840 aa24.78■■□□□ 1.56
SNRPA-205ENST00000598923 PHACTR3Q96KR7 559 aa24.78■■□□□ 1.56
SNRPA-205ENST00000598923 N4BP2Q86UW6 1770 aaPredicted RBP24.77■■□□□ 1.56
SNRPA-205ENST00000598923 GYS1P13807 737 aa24.77■■□□□ 1.56
SNRPA-205ENST00000598923 GAS2L2Q8NHY3 880 aa24.77■■□□□ 1.56
SNRPA-205ENST00000598923 ZNF316A6NFI3 1004 aaPredicted RBP24.76■■□□□ 1.55
SNRPA-205ENST00000598923 CRKLP46109 303 aaKnown RBP24.76■■□□□ 1.55
SNRPA-205ENST00000598923 FCHSD2O94868 740 aa24.75■■□□□ 1.55
SNRPA-205ENST00000598923 RFC4P35249 363 aa24.75■■□□□ 1.55
SNRPA-205ENST00000598923 UBR2Q8IWV8 1755 aa24.75■■□□□ 1.55
SNRPA-205ENST00000598923 BRCA1P38398 1863 aaKnown RBP24.73■■□□□ 1.55
SNRPA-205ENST00000598923 KCPQ6ZWJ8 1503 aa24.73■■□□□ 1.55
SNRPA-205ENST00000598923 PXDNLA1KZ92 1463 aa24.73■■□□□ 1.55
SNRPA-205ENST00000598923 C10orf71Q711Q0 1435 aa24.73■■□□□ 1.55
SNRPA-205ENST00000598923 GNAT3A8MTJ3 354 aa24.73■■□□□ 1.55
SNRPA-205ENST00000598923 INTS5Q6P9B9 1019 aaKnown RBP24.72■■□□□ 1.55
SNRPA-205ENST00000598923 MYBBP1AQ9BQG0 1328 aaKnown RBP24.71■■□□□ 1.55
SNRPA-205ENST00000598923 C1QTNF8P60827 252 aa24.71■■□□□ 1.55
SNRPA-205ENST00000598923 SIPA1L3O60292 1781 aaPredicted RBP24.7■■□□□ 1.55
SNRPA-205ENST00000598923 TGFB2P61812 414 aa24.7■■□□□ 1.54
SNRPA-205ENST00000598923 DNAJC10Q8IXB1 793 aa24.7■■□□□ 1.54
SNRPA-205ENST00000598923 IL17REQ8NFR9 667 aa24.7■■□□□ 1.54
SNRPA-205ENST00000598923 WWC3Q9ULE0 1092 aa24.7■■□□□ 1.54
SNRPA-205ENST00000598923 ADCY9O60503 1353 aa24.69■■□□□ 1.54
SNRPA-205ENST00000598923 USP42Q9H9J4 1324 aaKnown RBP24.69■■□□□ 1.54
SNRPA-205ENST00000598923 NEFMP07197 916 aa24.69■■□□□ 1.54
SNRPA-205ENST00000598923 SLC39A6Q13433 755 aa24.69■■□□□ 1.54
SNRPA-205ENST00000598923 SRP68Q9UHB9 627 aaKnown RBP24.68■■□□□ 1.54
SNRPA-205ENST00000598923 ATP10DQ9P241 1426 aa24.68■■□□□ 1.54
SNRPA-205ENST00000598923 GIGYF1O75420 1035 aaPredicted RBP24.67■■□□□ 1.54
SNRPA-205ENST00000598923 TEFQ10587 303 aa24.67■■□□□ 1.54
SNRPA-205ENST00000598923 PRKRIP1Q9H875 184 aaPredicted RBP24.67■■□□□ 1.54
SNRPA-205ENST00000598923 CCDC87Q9NVE4 849 aa24.67■■□□□ 1.54
SNRPA-205ENST00000598923 PARP3Q9Y6F1 533 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms