RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 ADAMTS7Q9UKP4 1686 aa21.54■■□□□ 1.04
SMG9-208ENST00000598886 MSH5O43196 834 aa21.54■■□□□ 1.04
SMG9-208ENST00000598886 HMGB2P26583 209 aaKnown RBP21.54■■□□□ 1.04
SMG9-208ENST00000598886 AMER1Q5JTC6 1135 aaPredicted RBP21.54■■□□□ 1.04
SMG9-208ENST00000598886 KLHL34Q8N239 644 aa21.54■■□□□ 1.04
SMG9-208ENST00000598886 SLC4A9Q96Q91 983 aa21.54■■□□□ 1.04
SMG9-208ENST00000598886 YBX3P16989 372 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMG9-208ENST00000598886 AEBP1Q8IUX7 1158 aa21.53■■□□□ 1.04
SMG9-208ENST00000598886 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.52■■□□□ 1.04
SMG9-208ENST00000598886 SSFA2P28290 1259 aa21.52■■□□□ 1.04
SMG9-208ENST00000598886 GPR162Q16538 588 aa21.52■■□□□ 1.04
SMG9-208ENST00000598886 AK7Q96M32 723 aa21.52■■□□□ 1.04
SMG9-208ENST00000598886 MORC1Q86VD1 984 aa21.51■■□□□ 1.03
SMG9-208ENST00000598886 ERVV-2B6SEH9 535 aa21.5■■□□□ 1.03
SMG9-208ENST00000598886 IL13P35225 146 aa21.5■■□□□ 1.03
SMG9-208ENST00000598886 DCAF5Q96JK2 942 aa21.5■■□□□ 1.03
SMG9-208ENST00000598886 CD2APQ9Y5K6 639 aa21.49■■□□□ 1.03
SMG9-208ENST00000598886 MRC1P22897 1456 aa21.48■■□□□ 1.03
SMG9-208ENST00000598886 PER1O15534 1290 aaPredicted RBP21.48■■□□□ 1.03
SMG9-208ENST00000598886 PHF14O94880 888 aa21.48■■□□□ 1.03
SMG9-208ENST00000598886 ATP6V1AP38606 617 aa21.47■■□□□ 1.03
SMG9-208ENST00000598886 PLEKHO1Q53GL0 409 aaPredicted RBP21.47■■□□□ 1.03
SMG9-208ENST00000598886 ZNF530Q6P9A1 599 aaPredicted RBP21.47■■□□□ 1.03
SMG9-208ENST00000598886 KNSTRNQ9Y448 316 aa21.47■■□□□ 1.03
SMG9-208ENST00000598886 BRCA1P38398 1863 aaKnown RBP21.47■■□□□ 1.03
SMG9-208ENST00000598886 COL3A1P02461 1466 aaPredicted RBP21.46■■□□□ 1.03
SMG9-208ENST00000598886 GNPATO15228 680 aa21.46■■□□□ 1.03
SMG9-208ENST00000598886 AMOTQ4VCS5 1084 aa21.46■■□□□ 1.03
SMG9-208ENST00000598886 HSP90AB1P08238 724 aaKnown RBP21.45■■□□□ 1.02
SMG9-208ENST00000598886 N4BP2Q86UW6 1770 aaPredicted RBP21.44■■□□□ 1.02
SMG9-208ENST00000598886 UBR2Q8IWV8 1755 aa21.44■■□□□ 1.02
SMG9-208ENST00000598886 SULT6B1Q6IMI4 303 aa21.44■■□□□ 1.02
SMG9-208ENST00000598886 CNTNAP4Q9C0A0 1308 aa21.44■■□□□ 1.02
SMG9-208ENST00000598886 PELP1Q8IZL8 1130 aaKnown RBP21.43■■□□□ 1.02
SMG9-208ENST00000598886 ADCY9O60503 1353 aa21.42■■□□□ 1.02
SMG9-208ENST00000598886 RC3H1Q5TC82 1133 aaKnown RBP21.41■■□□□ 1.02
SMG9-208ENST00000598886 SIPA1L3O60292 1781 aaPredicted RBP21.41■■□□□ 1.02
SMG9-208ENST00000598886 KCPQ6ZWJ8 1503 aa21.4■■□□□ 1.02
SMG9-208ENST00000598886 PXDNLA1KZ92 1463 aa21.4■■□□□ 1.02
SMG9-208ENST00000598886 C10orf71Q711Q0 1435 aa21.4■■□□□ 1.02
SMG9-208ENST00000598886 GRIN3BO60391 1043 aa21.4■■□□□ 1.02
SMG9-208ENST00000598886 NPC1L1Q9UHC9 1359 aa21.39■■□□□ 1.02
SMG9-208ENST00000598886 MTHFSP49914 203 aa21.39■■□□□ 1.01
SMG9-208ENST00000598886 CABP4P57796 275 aa21.38■■□□□ 1.01
SMG9-208ENST00000598886 RBM42Q9BTD8 480 aaKnown RBP21.38■■□□□ 1.01
SMG9-208ENST00000598886 ADRA2BP18089 450 aa21.37■■□□□ 1.01
SMG9-208ENST00000598886 NFATC2IPQ8NCF5 419 aa21.37■■□□□ 1.01
SMG9-208ENST00000598886 RPS6KA4O75676 772 aa21.36■■□□□ 1.01
SMG9-208ENST00000598886 MMP10P09238 476 aa21.36■■□□□ 1.01
SMG9-208ENST00000598886 C1orf141Q5JVX7 400 aa21.36■■□□□ 1.01
SMG9-208ENST00000598886 ARHGEF1Q92888 912 aaKnown RBP21.36■■□□□ 1.01
SMG9-208ENST00000598886 RTCBQ9Y3I0 505 aaKnown RBP21.36■■□□□ 1.01
SMG9-208ENST00000598886 ARFGEF1Q9Y6D6 1849 aa21.35■■□□□ 1.01
SMG9-208ENST00000598886 GYS1P13807 737 aa21.35■■□□□ 1.01
SMG9-208ENST00000598886 ATP10DQ9P241 1426 aa21.35■■□□□ 1.01
SMG9-208ENST00000598886 C1QTNF8P60827 252 aa21.34■■□□□ 1.01
SMG9-208ENST00000598886 AKAP4Q5JQC9 854 aa21.34■■□□□ 1.01
SMG9-208ENST00000598886 TRAPPC3LQ5T215 181 aa21.34■■□□□ 1.01
SMG9-208ENST00000598886 PTCD1O75127 700 aaKnown RBP21.33■■□□□ 1.01
SMG9-208ENST00000598886 LGR6Q9HBX8 967 aa21.33■■□□□ 1.01
SMG9-208ENST00000598886 CRKLP46109 303 aaKnown RBP21.32■■□□□ 1
SMG9-208ENST00000598886 SLC52A2Q9HAB3 445 aa21.32■■□□□ 1
SMG9-208ENST00000598886 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
SMG9-208ENST00000598886 HMOX1P09601 288 aa21.31■■□□□ 1
SMG9-208ENST00000598886 CC2D1BQ5T0F9 858 aaKnown RBP21.31■■□□□ 1
SMG9-208ENST00000598886 NLGN1Q8N2Q7 840 aa21.31■■□□□ 1
SMG9-208ENST00000598886 AFDNP55196 1824 aaKnown RBP21.31■■□□□ 1
SMG9-208ENST00000598886 MTHFSDQ2M296 383 aaKnown RBP21.3■■□□□ 1
SMG9-208ENST00000598886 INTS5Q6P9B9 1019 aaKnown RBP21.3■■□□□ 1
SMG9-208ENST00000598886 RNMTO43148 476 aaKnown RBP21.29■■□□□ 1
SMG9-208ENST00000598886 USP42Q9H9J4 1324 aaKnown RBP21.29■■□□□ 1
SMG9-208ENST00000598886 DIAPH1O60610 1272 aaKnown RBP21.28■■□□□ 1
SMG9-208ENST00000598886 WWC3Q9ULE0 1092 aa21.28■■□□□ 1
SMG9-208ENST00000598886 DLEC1Q9Y238 1755 aa21.28■■□□□ 1
SMG9-208ENST00000598886 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
SMG9-208ENST00000598886 SRP68Q9UHB9 627 aaKnown RBP21.27■■□□□ 1
SMG9-208ENST00000598886 RFC4P35249 363 aa21.26■□□□□ 0.99
SMG9-208ENST00000598886 DNAJC10Q8IXB1 793 aa21.26■□□□□ 0.99
SMG9-208ENST00000598886 SCN7AQ01118 1682 aa21.25■□□□□ 0.99
SMG9-208ENST00000598886 TGFB2P61812 414 aa21.25■□□□□ 0.99
SMG9-208ENST00000598886 DDR1Q08345 913 aa21.25■□□□□ 0.99
SMG9-208ENST00000598886 FKBP8Q14318 412 aa21.25■□□□□ 0.99
SMG9-208ENST00000598886 CEP350Q5VT06 3117 aa21.25■□□□□ 0.99
SMG9-208ENST00000598886 SOS1Q07889 1333 aaPredicted RBP21.25■□□□□ 0.99
SMG9-208ENST00000598886 CYP19A1P11511 503 aaPredicted RBP21.24■□□□□ 0.99
SMG9-208ENST00000598886 SLC39A6Q13433 755 aa21.24■□□□□ 0.99
SMG9-208ENST00000598886 KCNA3P22001 575 aa21.23■□□□□ 0.99
SMG9-208ENST00000598886 CCDC87Q9NVE4 849 aa21.23■□□□□ 0.99
SMG9-208ENST00000598886 A0A0G2JLW4 131 aa21.22■□□□□ 0.99
SMG9-208ENST00000598886 DPEP1P16444 411 aa21.21■□□□□ 0.99
SMG9-208ENST00000598886 SBF1O95248 1867 aa21.2■□□□□ 0.98
SMG9-208ENST00000598886 SENP3-EIF4A1A0A087X0R7 540 aa21.2■□□□□ 0.98
SMG9-208ENST00000598886 TM4SF1P30408 202 aa21.2■□□□□ 0.98
SMG9-208ENST00000598886 PARP3Q9Y6F1 533 aa21.2■□□□□ 0.98
SMG9-208ENST00000598886 COL15A1P39059 1388 aa21.2■□□□□ 0.98
SMG9-208ENST00000598886 CEMIPQ8WUJ3 1361 aa21.2■□□□□ 0.98
SMG9-208ENST00000598886 ANKRD31Q8N7Z5 1873 aa21.2■□□□□ 0.98
SMG9-208ENST00000598886 POLRMTO00411 1230 aaKnown RBP21.19■□□□□ 0.98
SMG9-208ENST00000598886 VSIG10Q8N0Z9 540 aa21.19■□□□□ 0.98
SMG9-208ENST00000598886 IL17REQ8NFR9 667 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms