RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 UBE4AQ14139 1066 aa6.84□□□□□ -1.31
PAF1-208ENST00000598594 ECM1Q16610 540 aa6.84□□□□□ -1.31
PAF1-208ENST00000598594 MAP9Q49MG5 647 aa6.84□□□□□ -1.31
PAF1-208ENST00000598594 ODR4Q5SWX8 454 aa6.84□□□□□ -1.31
PAF1-208ENST00000598594 PRPF38BQ5VTL8 546 aaKnown RBP6.84□□□□□ -1.31
PAF1-208ENST00000598594 DEPDC4Q8N2C3 294 aa6.84□□□□□ -1.31
PAF1-208ENST00000598594 LRRN4Q8WUT4 740 aa6.84□□□□□ -1.31
PAF1-208ENST00000598594 KCNH8Q96L42 1107 aa6.84□□□□□ -1.31
PAF1-208ENST00000598594 C8orf48Q96LL4 319 aa6.84□□□□□ -1.31
PAF1-208ENST00000598594 SWAP70Q9UH65 585 aa6.84□□□□□ -1.31
PAF1-208ENST00000598594 TTF2Q9UNY4 1162 aaKnown RBP6.84□□□□□ -1.31
PAF1-208ENST00000598594 USP17L5A8MUK1 530 aa6.83□□□□□ -1.32
PAF1-208ENST00000598594 K7ELQ4 463 aaPredicted RBP6.83□□□□□ -1.32
PAF1-208ENST00000598594 SAFB2Q14151 953 aaKnown RBP eCLIP6.83□□□□□ -1.32
PAF1-208ENST00000598594 SWI5Q1ZZU3 235 aa6.83□□□□□ -1.32
PAF1-208ENST00000598594 MCF2L2Q86YR7 1114 aa6.83□□□□□ -1.32
PAF1-208ENST00000598594 ANKMY2Q8IV38 441 aa6.83□□□□□ -1.32
PAF1-208ENST00000598594 PLEKHM2Q8IWE5 1019 aa6.83□□□□□ -1.32
PAF1-208ENST00000598594 FRMD6Q96NE9 622 aa6.83□□□□□ -1.32
PAF1-208ENST00000598594 QTRT2Q9H974 415 aaKnown RBP6.83□□□□□ -1.32
PAF1-208ENST00000598594 PARP2Q9UGN5 583 aa6.83□□□□□ -1.32
PAF1-208ENST00000598594 SFMBT1Q9UHJ3 866 aa6.83□□□□□ -1.32
PAF1-208ENST00000598594 PRKAB1Q9Y478 270 aa6.83□□□□□ -1.32
PAF1-208ENST00000598594 SORBS3O60504 671 aa6.82□□□□□ -1.32
PAF1-208ENST00000598594 CD46P15529 392 aa6.82□□□□□ -1.32
PAF1-208ENST00000598594 RINLQ6ZS11 566 aa6.82□□□□□ -1.32
PAF1-208ENST00000598594 NFATC2IPQ8NCF5 419 aa6.82□□□□□ -1.32
PAF1-208ENST00000598594 PNMA1Q8ND90 353 aa6.82□□□□□ -1.32
PAF1-208ENST00000598594 IL17RAQ96F46 866 aa6.82□□□□□ -1.32
PAF1-208ENST00000598594 IER2Q9BTL4 223 aa6.82□□□□□ -1.32
PAF1-208ENST00000598594 ZBTB3Q9H5J0 574 aa6.82□□□□□ -1.32
PAF1-208ENST00000598594 VTI1BQ9UEU0 232 aa6.82□□□□□ -1.32
PAF1-208ENST00000598594 MAP3K7O43318 606 aa6.81□□□□□ -1.32
PAF1-208ENST00000598594 PRMT3O60678 531 aa6.81□□□□□ -1.32
PAF1-208ENST00000598594 ITGAEP38570 1179 aa6.81□□□□□ -1.32
PAF1-208ENST00000598594 ARHGAP4P98171 946 aa6.81□□□□□ -1.32
PAF1-208ENST00000598594 EN1Q05925 392 aaPredicted RBP6.81□□□□□ -1.32
PAF1-208ENST00000598594 DHX8Q14562 1220 aaKnown RBP6.81□□□□□ -1.32
PAF1-208ENST00000598594 DMRTA1Q5VZB9 504 aa6.81□□□□□ -1.32
PAF1-208ENST00000598594 ZNF280DQ6N043 979 aa6.81□□□□□ -1.32
PAF1-208ENST00000598594 TAS1R3Q7RTX0 852 aa6.81□□□□□ -1.32
PAF1-208ENST00000598594 VPS37DQ86XT2 251 aa6.81□□□□□ -1.32
PAF1-208ENST00000598594 CACTIN-AS1Q8N1I8 211 aa6.81□□□□□ -1.32
PAF1-208ENST00000598594 TYW1Q9NV66 732 aaKnown RBP6.81□□□□□ -1.32
PAF1-208ENST00000598594 ADGRG1Q9Y653 693 aa6.81□□□□□ -1.32
PAF1-208ENST00000598594 ANP32CO43423 234 aa6.8□□□□□ -1.32
PAF1-208ENST00000598594 EVI5O60447 810 aa6.8□□□□□ -1.32
PAF1-208ENST00000598594 LDHAP00338 332 aaKnown RBP6.8□□□□□ -1.32
PAF1-208ENST00000598594 PSEN2P49810 448 aa6.8□□□□□ -1.32
PAF1-208ENST00000598594 DPYDQ12882 1025 aa6.8□□□□□ -1.32
PAF1-208ENST00000598594 CCSAPQ6IQ19 270 aaPredicted RBP6.8□□□□□ -1.32
PAF1-208ENST00000598594 FERMT3Q86UX7 667 aa6.8□□□□□ -1.32
PAF1-208ENST00000598594 PPARGC1BQ86YN6 1023 aaKnown RBP6.8□□□□□ -1.32
PAF1-208ENST00000598594 RNPC3Q96LT9 517 aaKnown RBP6.8□□□□□ -1.32
PAF1-208ENST00000598594 STAC3Q96MF2 364 aa6.8□□□□□ -1.32
PAF1-208ENST00000598594 NAP1L4Q99733 375 aaKnown RBP6.8□□□□□ -1.32
PAF1-208ENST00000598594 RNF19AQ9NV58 838 aa6.8□□□□□ -1.32
PAF1-208ENST00000598594 MAP3K20Q9NYL2 800 aaKnown RBP6.8□□□□□ -1.32
PAF1-208ENST00000598594 FMNL1O95466 1100 aaPredicted RBP6.79□□□□□ -1.32
PAF1-208ENST00000598594 HSP90AA1P07900 732 aaKnown RBP6.79□□□□□ -1.32
PAF1-208ENST00000598594 FKBP4Q02790 459 aaKnown RBP eCLIP6.79□□□□□ -1.32
PAF1-208ENST00000598594 PLEKHG4Q58EX7 1191 aa6.79□□□□□ -1.32
PAF1-208ENST00000598594 TMC4Q7Z404 712 aa6.79□□□□□ -1.32
PAF1-208ENST00000598594 GTF3C2Q8WUA4 911 aaPredicted RBP6.79□□□□□ -1.32
PAF1-208ENST00000598594 MPHOSPH6Q99547 160 aaKnown RBP6.79□□□□□ -1.32
PAF1-208ENST00000598594 EPAS1Q99814 870 aa6.79□□□□□ -1.32
PAF1-208ENST00000598594 DUSP9Q99956 384 aaKnown RBP6.79□□□□□ -1.32
PAF1-208ENST00000598594 SLKQ9H2G2 1235 aaPredicted RBP6.79□□□□□ -1.32
PAF1-208ENST00000598594 KAT6BQ8WYB5 2073 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 CFAP69A5D8W1 941 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 EPB41L2O43491 1005 aaKnown RBP6.78□□□□□ -1.32
PAF1-208ENST00000598594 PLIN1O60240 522 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 LDHBP07195 334 aaKnown RBP6.78□□□□□ -1.32
PAF1-208ENST00000598594 VIL1P09327 827 aaKnown RBP6.78□□□□□ -1.32
PAF1-208ENST00000598594 FGRP09769 529 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 CD53P19397 219 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 DAB2P98082 770 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 PSMD2Q13200 908 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 ZRSR2Q15696 482 aaKnown RBP6.78□□□□□ -1.32
PAF1-208ENST00000598594 TMC7Q7Z402 723 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 PCGF5Q86SE9 256 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 RNF135Q8IUD6 432 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 WDR75Q8IWA0 830 aaKnown RBP6.78□□□□□ -1.32
PAF1-208ENST00000598594 KCTD12Q96CX2 325 aaKnown RBP6.78□□□□□ -1.32
PAF1-208ENST00000598594 RBM33Q96EV2 1170 aaKnown RBP6.78□□□□□ -1.32
PAF1-208ENST00000598594 PRIMPOLQ96LW4 560 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 CEP89Q96ST8 783 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.78□□□□□ -1.32
PAF1-208ENST00000598594 CXXC1Q9P0U4 656 aaPredicted RBP6.78□□□□□ -1.32
PAF1-208ENST00000598594 NRBP1Q9UHY1 535 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 KCNG1Q9UIX4 513 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 THRAP3Q9Y2W1 955 aaKnown RBP6.78□□□□□ -1.32
PAF1-208ENST00000598594 EID1Q9Y6B2 187 aa6.78□□□□□ -1.32
PAF1-208ENST00000598594 CLSPNQ9HAW4 1339 aa6.77□□□□□ -1.32
PAF1-208ENST00000598594 PRPF40AO75400 957 aaKnown RBP6.77□□□□□ -1.33
PAF1-208ENST00000598594 RGS20O76081 388 aa6.77□□□□□ -1.33
PAF1-208ENST00000598594 CALRP27797 417 aaKnown RBP6.77□□□□□ -1.33
PAF1-208ENST00000598594 GNALP38405 381 aa6.77□□□□□ -1.33
PAF1-208ENST00000598594 RACK1P63244 317 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms