RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 C5P01031 1676 aa19.62■□□□□ 0.73
XRCC1-208ENST00000598422 PHF14O94880 888 aa19.62■□□□□ 0.73
XRCC1-208ENST00000598422 PPP2R1AP30153 589 aa19.62■□□□□ 0.73
XRCC1-208ENST00000598422 KLHL34Q8N239 644 aa19.62■□□□□ 0.73
XRCC1-208ENST00000598422 LINC00116Q8NCU8 138 aa19.62■□□□□ 0.73
XRCC1-208ENST00000598422 ITGB4P16144 1822 aa19.62■□□□□ 0.73
XRCC1-208ENST00000598422 GNPATO15228 680 aa19.61■□□□□ 0.73
XRCC1-208ENST00000598422 ITPK1Q13572 414 aa19.61■□□□□ 0.73
XRCC1-208ENST00000598422 MTHFSDQ2M296 383 aaKnown RBP19.61■□□□□ 0.73
XRCC1-208ENST00000598422 MSL1Q68DK7 614 aa19.61■□□□□ 0.73
XRCC1-208ENST00000598422 NFATC2IPQ8NCF5 419 aa19.61■□□□□ 0.73
XRCC1-208ENST00000598422 C4BP0C0L5 1744 aa19.59■□□□□ 0.73
XRCC1-208ENST00000598422 QSER1Q2KHR3 1735 aa19.59■□□□□ 0.73
XRCC1-208ENST00000598422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.59■□□□□ 0.73
XRCC1-208ENST00000598422 SSFA2P28290 1259 aa19.59■□□□□ 0.73
XRCC1-208ENST00000598422 GAS2L2Q8NHY3 880 aa19.59■□□□□ 0.73
XRCC1-208ENST00000598422 SYT17Q9BSW7 474 aa19.59■□□□□ 0.73
XRCC1-208ENST00000598422 RNMTO43148 476 aaKnown RBP19.58■□□□□ 0.72
XRCC1-208ENST00000598422 PTCD1O75127 700 aaKnown RBP19.58■□□□□ 0.72
XRCC1-208ENST00000598422 SLC52A2Q9HAB3 445 aa19.58■□□□□ 0.72
XRCC1-208ENST00000598422 U2AF1L5P0DN76 240 aaPredicted RBP19.57■□□□□ 0.72
XRCC1-208ENST00000598422 U2AF1Q01081 240 aaKnown RBP eCLIP19.57■□□□□ 0.72
XRCC1-208ENST00000598422 MAP3K5Q99683 1374 aa19.57■□□□□ 0.72
XRCC1-208ENST00000598422 PRKAR2BP31323 418 aa19.56■□□□□ 0.72
XRCC1-208ENST00000598422 LGR6Q9HBX8 967 aa19.56■□□□□ 0.72
XRCC1-208ENST00000598422 TUBGCP6Q96RT7 1819 aa19.55■□□□□ 0.72
XRCC1-208ENST00000598422 AMIGO3Q86WK7 504 aa19.55■□□□□ 0.72
XRCC1-208ENST00000598422 SLC4A9Q96Q91 983 aa19.55■□□□□ 0.72
XRCC1-208ENST00000598422 RTCBQ9Y3I0 505 aaKnown RBP19.55■□□□□ 0.72
XRCC1-208ENST00000598422 SMIM5Q71RC9 77 aa19.54■□□□□ 0.72
XRCC1-208ENST00000598422 RSPH6AQ9H0K4 717 aa19.54■□□□□ 0.72
XRCC1-208ENST00000598422 MRC1P22897 1456 aa19.54■□□□□ 0.72
XRCC1-208ENST00000598422 CNTNAP4Q9C0A0 1308 aa19.53■□□□□ 0.72
XRCC1-208ENST00000598422 GNAT3A8MTJ3 354 aa19.53■□□□□ 0.72
XRCC1-208ENST00000598422 TEFQ10587 303 aa19.52■□□□□ 0.72
XRCC1-208ENST00000598422 RC3H1Q5TC82 1133 aaKnown RBP19.52■□□□□ 0.72
XRCC1-208ENST00000598422 TAF1LQ8IZX4 1826 aa19.51■□□□□ 0.71
XRCC1-208ENST00000598422 ADRA2BP18089 450 aa19.51■□□□□ 0.71
XRCC1-208ENST00000598422 TRAPPC3LQ5T215 181 aa19.51■□□□□ 0.71
XRCC1-208ENST00000598422 TTC5Q8N0Z6 440 aa19.51■□□□□ 0.71
XRCC1-208ENST00000598422 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
XRCC1-208ENST00000598422 SLC39A6Q13433 755 aa19.5■□□□□ 0.71
XRCC1-208ENST00000598422 FCHSD2O94868 740 aa19.49■□□□□ 0.71
XRCC1-208ENST00000598422 NEFMP07197 916 aa19.49■□□□□ 0.71
XRCC1-208ENST00000598422 CRKLP46109 303 aaKnown RBP19.49■□□□□ 0.71
XRCC1-208ENST00000598422 PHACTR3Q96KR7 559 aa19.49■□□□□ 0.71
XRCC1-208ENST00000598422 RPS6KA4O75676 772 aa19.48■□□□□ 0.71
XRCC1-208ENST00000598422 RFC4P35249 363 aa19.48■□□□□ 0.71
XRCC1-208ENST00000598422 SCN11AQ9UI33 1791 aa19.47■□□□□ 0.71
XRCC1-208ENST00000598422 ZNF831Q5JPB2 1677 aa19.47■□□□□ 0.71
XRCC1-208ENST00000598422 RALBP1Q15311 655 aa19.47■□□□□ 0.71
XRCC1-208ENST00000598422 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
XRCC1-208ENST00000598422 RTF1Q92541 710 aaKnown RBP19.47■□□□□ 0.71
XRCC1-208ENST00000598422 YY1P25490 414 aa19.46■□□□□ 0.71
XRCC1-208ENST00000598422 ZEB1P37275 1124 aaPredicted RBP19.46■□□□□ 0.71
XRCC1-208ENST00000598422 GPR162Q16538 588 aa19.46■□□□□ 0.71
XRCC1-208ENST00000598422 DNAJC10Q8IXB1 793 aa19.46■□□□□ 0.71
XRCC1-208ENST00000598422 IL17REQ8NFR9 667 aa19.46■□□□□ 0.71
XRCC1-208ENST00000598422 NLGN2Q8NFZ4 835 aa19.46■□□□□ 0.71
XRCC1-208ENST00000598422 ARHGEF1Q92888 912 aaKnown RBP19.45■□□□□ 0.7
XRCC1-208ENST00000598422 UBR3Q6ZT12 1888 aa19.45■□□□□ 0.7
XRCC1-208ENST00000598422 MMP10P09238 476 aa19.44■□□□□ 0.7
XRCC1-208ENST00000598422 NLGN1Q8N2Q7 840 aa19.44■□□□□ 0.7
XRCC1-208ENST00000598422 CCDC87Q9NVE4 849 aa19.44■□□□□ 0.7
XRCC1-208ENST00000598422 CD2APQ9Y5K6 639 aa19.44■□□□□ 0.7
XRCC1-208ENST00000598422 COL24A1Q17RW2 1714 aa19.44■□□□□ 0.7
XRCC1-208ENST00000598422 ADAMTS7Q9UKP4 1686 aa19.43■□□□□ 0.7
XRCC1-208ENST00000598422 KCPQ6ZWJ8 1503 aa19.43■□□□□ 0.7
XRCC1-208ENST00000598422 VSIG10Q8N0Z9 540 aa19.43■□□□□ 0.7
XRCC1-208ENST00000598422 CEMIPQ8WUJ3 1361 aa19.43■□□□□ 0.7
XRCC1-208ENST00000598422 ZNF790Q6PG37 636 aa19.42■□□□□ 0.7
XRCC1-208ENST00000598422 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
XRCC1-208ENST00000598422 STARD3NLO95772 234 aa19.41■□□□□ 0.7
XRCC1-208ENST00000598422 CYP19A1P11511 503 aaPredicted RBP19.41■□□□□ 0.7
XRCC1-208ENST00000598422 INTS5Q6P9B9 1019 aaKnown RBP19.41■□□□□ 0.7
XRCC1-208ENST00000598422 PNNQ9H307 717 aaKnown RBP19.41■□□□□ 0.7
XRCC1-208ENST00000598422 COL5A3P25940 1745 aaPredicted RBP19.41■□□□□ 0.7
XRCC1-208ENST00000598422 MAPK8IP3Q9UPT6 1336 aa19.41■□□□□ 0.7
XRCC1-208ENST00000598422 FMNL2Q96PY5 1086 aa19.4■□□□□ 0.7
XRCC1-208ENST00000598422 MYBBP1AQ9BQG0 1328 aaKnown RBP19.4■□□□□ 0.7
XRCC1-208ENST00000598422 CICQ96RK0 1608 aaPredicted RBP19.4■□□□□ 0.7
XRCC1-208ENST00000598422 TJP1Q07157 1748 aa19.39■□□□□ 0.7
XRCC1-208ENST00000598422 HTATSF1O43719 755 aaKnown RBP19.39■□□□□ 0.69
XRCC1-208ENST00000598422 GYS1P13807 737 aa19.39■□□□□ 0.69
XRCC1-208ENST00000598422 MCM10Q7L590 875 aa19.39■□□□□ 0.69
XRCC1-208ENST00000598422 ZNF496Q96IT1 587 aaPredicted RBP19.39■□□□□ 0.69
XRCC1-208ENST00000598422 SOS1Q07889 1333 aaPredicted RBP19.39■□□□□ 0.69
XRCC1-208ENST00000598422 ZPR1O75312 459 aa19.38■□□□□ 0.69
XRCC1-208ENST00000598422 TEX13AQ9BXU3 409 aaPredicted RBP19.38■□□□□ 0.69
XRCC1-208ENST00000598422 USP42Q9H9J4 1324 aaKnown RBP19.38■□□□□ 0.69
XRCC1-208ENST00000598422 SRP68Q9UHB9 627 aaKnown RBP19.38■□□□□ 0.69
XRCC1-208ENST00000598422 HEG1Q9ULI3 1381 aa19.38■□□□□ 0.69
XRCC1-208ENST00000598422 ZBTB1Q9Y2K1 713 aa19.38■□□□□ 0.69
XRCC1-208ENST00000598422 PARP3Q9Y6F1 533 aa19.38■□□□□ 0.69
XRCC1-208ENST00000598422 COL15A1P39059 1388 aa19.36■□□□□ 0.69
XRCC1-208ENST00000598422 CANXP27824 592 aaKnown RBP19.36■□□□□ 0.69
XRCC1-208ENST00000598422 DCTN1Q14203 1278 aa19.36■□□□□ 0.69
XRCC1-208ENST00000598422 GRIN3BO60391 1043 aa19.35■□□□□ 0.69
XRCC1-208ENST00000598422 FKBP8Q14318 412 aa19.34■□□□□ 0.69
XRCC1-208ENST00000598422 NFE2L2Q16236 605 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms