RNA–Protein interactions for RNA: ENST00000598258.5

TMEM143-208, Transcript of transmembrane protein 143, humanhuman

TSL 4

Gene TMEM143, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-208ENST00000598258 C1orf141Q5JVX7 400 aa20.53■□□□□ 0.88
TMEM143-208ENST00000598258 SMIM5Q71RC9 77 aa20.53■□□□□ 0.88
TMEM143-208ENST00000598258 UBR2Q8IWV8 1755 aa20.52■□□□□ 0.88
TMEM143-208ENST00000598258 ITPK1Q13572 414 aa20.52■□□□□ 0.88
TMEM143-208ENST00000598258 PNPLA7Q6ZV29 1317 aa20.52■□□□□ 0.87
TMEM143-208ENST00000598258 RNMTO43148 476 aaKnown RBP20.51■□□□□ 0.87
TMEM143-208ENST00000598258 U2AF1L5P0DN76 240 aaPredicted RBP20.51■□□□□ 0.87
TMEM143-208ENST00000598258 U2AF1Q01081 240 aaKnown RBP eCLIP20.51■□□□□ 0.87
TMEM143-208ENST00000598258 NFATC2IPQ8NCF5 419 aa20.51■□□□□ 0.87
TMEM143-208ENST00000598258 CICQ96RK0 1608 aaPredicted RBP20.5■□□□□ 0.87
TMEM143-208ENST00000598258 ZBTB7AO95365 584 aa20.5■□□□□ 0.87
TMEM143-208ENST00000598258 HSP90AB1P08238 724 aaKnown RBP20.5■□□□□ 0.87
TMEM143-208ENST00000598258 RALBP1Q15311 655 aa20.5■□□□□ 0.87
TMEM143-208ENST00000598258 LINC00116Q8NCU8 138 aa20.5■□□□□ 0.87
TMEM143-208ENST00000598258 LOC102724428A0A0B4J2F2 783 aa20.49■□□□□ 0.87
TMEM143-208ENST00000598258 SIK1P57059 783 aa20.49■□□□□ 0.87
TMEM143-208ENST00000598258 CABP4P57796 275 aa20.49■□□□□ 0.87
TMEM143-208ENST00000598258 IL17REQ8NFR9 667 aa20.49■□□□□ 0.87
TMEM143-208ENST00000598258 KCPQ6ZWJ8 1503 aa20.48■□□□□ 0.87
TMEM143-208ENST00000598258 ZNF316A6NFI3 1004 aaPredicted RBP20.48■□□□□ 0.87
TMEM143-208ENST00000598258 SMARCC1Q92922 1105 aaPredicted RBP20.48■□□□□ 0.87
TMEM143-208ENST00000598258 PRKRIP1Q9H875 184 aaPredicted RBP20.48■□□□□ 0.87
TMEM143-208ENST00000598258 MAP3K5Q99683 1374 aa20.47■□□□□ 0.87
TMEM143-208ENST00000598258 PTGER2P43116 358 aa20.47■□□□□ 0.87
TMEM143-208ENST00000598258 PLEKHF1Q96S99 279 aa20.47■□□□□ 0.87
TMEM143-208ENST00000598258 SLC52A2Q9HAB3 445 aa20.47■□□□□ 0.87
TMEM143-208ENST00000598258 MYBBP1AQ9BQG0 1328 aaKnown RBP20.47■□□□□ 0.87
TMEM143-208ENST00000598258 SGIP1Q9BQI5 828 aa20.46■□□□□ 0.87
TMEM143-208ENST00000598258 NUDCQ9Y266 331 aa20.46■□□□□ 0.87
TMEM143-208ENST00000598258 ATF5Q9Y2D1 282 aaPredicted RBP20.46■□□□□ 0.87
TMEM143-208ENST00000598258 FCHSD2O94868 740 aa20.45■□□□□ 0.86
TMEM143-208ENST00000598258 SLC39A6Q13433 755 aa20.45■□□□□ 0.86
TMEM143-208ENST00000598258 COL23A1Q86Y22 540 aaPredicted RBP20.44■□□□□ 0.86
TMEM143-208ENST00000598258 CEMIPQ8WUJ3 1361 aa20.44■□□□□ 0.86
TMEM143-208ENST00000598258 C4AP0C0L4 1744 aa20.44■□□□□ 0.86
TMEM143-208ENST00000598258 ATP6V1AP38606 617 aa20.43■□□□□ 0.86
TMEM143-208ENST00000598258 TFCP2L1Q9NZI6 479 aa20.43■□□□□ 0.86
TMEM143-208ENST00000598258 GNAT3A8MTJ3 354 aa20.42■□□□□ 0.86
TMEM143-208ENST00000598258 PTCD1O75127 700 aaKnown RBP20.42■□□□□ 0.86
TMEM143-208ENST00000598258 CCDC184Q52MB2 194 aa20.42■□□□□ 0.86
TMEM143-208ENST00000598258 GAS2L2Q8NHY3 880 aa20.42■□□□□ 0.86
TMEM143-208ENST00000598258 RBM42Q9BTD8 480 aaKnown RBP20.42■□□□□ 0.86
TMEM143-208ENST00000598258 DCTN1Q14203 1278 aa20.41■□□□□ 0.86
TMEM143-208ENST00000598258 SPON1Q9HCB6 807 aa20.41■□□□□ 0.86
TMEM143-208ENST00000598258 MCM10Q7L590 875 aa20.39■□□□□ 0.85
TMEM143-208ENST00000598258 MTFR1LQ9H019 292 aa20.39■□□□□ 0.85
TMEM143-208ENST00000598258 KCNQ3O43525 872 aa20.38■□□□□ 0.85
TMEM143-208ENST00000598258 KDM3BQ7LBC6 1761 aa20.36■□□□□ 0.85
TMEM143-208ENST00000598258 PHF14O94880 888 aa20.36■□□□□ 0.85
TMEM143-208ENST00000598258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.35■□□□□ 0.85
TMEM143-208ENST00000598258 MSL1Q68DK7 614 aa20.35■□□□□ 0.85
TMEM143-208ENST00000598258 DNAJC10Q8IXB1 793 aa20.35■□□□□ 0.85
TMEM143-208ENST00000598258 AK7Q96M32 723 aa20.35■□□□□ 0.85
TMEM143-208ENST00000598258 GNPATO15228 680 aa20.34■□□□□ 0.85
TMEM143-208ENST00000598258 CCDC146Q8IYE0 955 aa20.34■□□□□ 0.85
TMEM143-208ENST00000598258 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
TMEM143-208ENST00000598258 CNTNAP4Q9C0A0 1308 aa20.33■□□□□ 0.85
TMEM143-208ENST00000598258 INTS5Q6P9B9 1019 aaKnown RBP20.33■□□□□ 0.85
TMEM143-208ENST00000598258 ZNF496Q96IT1 587 aaPredicted RBP20.33■□□□□ 0.85
TMEM143-208ENST00000598258 CRKLP46109 303 aaKnown RBP20.32■□□□□ 0.84
TMEM143-208ENST00000598258 ADAMTS8Q9UP79 889 aa20.32■□□□□ 0.84
TMEM143-208ENST00000598258 TEFQ10587 303 aa20.31■□□□□ 0.84
TMEM143-208ENST00000598258 NFE2L2Q16236 605 aa20.31■□□□□ 0.84
TMEM143-208ENST00000598258 ZNF790Q6PG37 636 aa20.31■□□□□ 0.84
TMEM143-208ENST00000598258 SLC16A10Q8TF71 515 aa20.31■□□□□ 0.84
TMEM143-208ENST00000598258 MSH5O43196 834 aa20.3■□□□□ 0.84
TMEM143-208ENST00000598258 CYP19A1P11511 503 aaPredicted RBP20.3■□□□□ 0.84
TMEM143-208ENST00000598258 SSFA2P28290 1259 aa20.3■□□□□ 0.84
TMEM143-208ENST00000598258 RC3H1Q5TC82 1133 aaKnown RBP20.3■□□□□ 0.84
TMEM143-208ENST00000598258 PRAMEF22A3QJZ6 481 aa20.29■□□□□ 0.84
TMEM143-208ENST00000598258 MIS18AQ9NYP9 233 aa20.29■□□□□ 0.84
TMEM143-208ENST00000598258 FHDC1Q9C0D6 1143 aaPredicted RBP20.28■□□□□ 0.84
TMEM143-208ENST00000598258 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
TMEM143-208ENST00000598258 HEG1Q9ULI3 1381 aa20.28■□□□□ 0.84
TMEM143-208ENST00000598258 HTATSF1O43719 755 aaKnown RBP20.27■□□□□ 0.84
TMEM143-208ENST00000598258 RPS6KA4O75676 772 aa20.27■□□□□ 0.84
TMEM143-208ENST00000598258 ARHGEF1Q92888 912 aaKnown RBP20.27■□□□□ 0.84
TMEM143-208ENST00000598258 ARXQ96QS3 562 aa20.27■□□□□ 0.84
TMEM143-208ENST00000598258 PPP1R1BQ9UD71 204 aaPredicted RBP20.27■□□□□ 0.84
TMEM143-208ENST00000598258 BTBD11A6QL63 1104 aa20.26■□□□□ 0.83
TMEM143-208ENST00000598258 TMPOP42166 694 aaKnown RBP20.26■□□□□ 0.83
TMEM143-208ENST00000598258 ZBTB1Q9Y2K1 713 aa20.26■□□□□ 0.83
TMEM143-208ENST00000598258 LAMB4A4D0S4 1761 aa20.26■□□□□ 0.83
TMEM143-208ENST00000598258 RTF1Q92541 710 aaKnown RBP20.25■□□□□ 0.83
TMEM143-208ENST00000598258 SRP68Q9UHB9 627 aaKnown RBP20.25■□□□□ 0.83
TMEM143-208ENST00000598258 RTCBQ9Y3I0 505 aaKnown RBP20.25■□□□□ 0.83
TMEM143-208ENST00000598258 MAPK8IP3Q9UPT6 1336 aa20.25■□□□□ 0.83
TMEM143-208ENST00000598258 KIAA1551Q9HCM1 1747 aa20.24■□□□□ 0.83
TMEM143-208ENST00000598258 GOLGB1Q14789 3259 aaKnown RBP20.24■□□□□ 0.83
TMEM143-208ENST00000598258 VSIG10Q8N0Z9 540 aa20.24■□□□□ 0.83
TMEM143-208ENST00000598258 FLAD1Q8NFF5 587 aa20.24■□□□□ 0.83
TMEM143-208ENST00000598258 SYT17Q9BSW7 474 aa20.24■□□□□ 0.83
TMEM143-208ENST00000598258 CCDC87Q9NVE4 849 aa20.24■□□□□ 0.83
TMEM143-208ENST00000598258 SOS1Q07889 1333 aaPredicted RBP20.24■□□□□ 0.83
TMEM143-208ENST00000598258 RIPK4P57078 832 aa20.23■□□□□ 0.83
TMEM143-208ENST00000598258 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
TMEM143-208ENST00000598258 TTC5Q8N0Z6 440 aa20.23■□□□□ 0.83
TMEM143-208ENST00000598258 TRIM35Q9UPQ4 493 aa20.23■□□□□ 0.83
TMEM143-208ENST00000598258 KIF13BQ9NQT8 1826 aa20.23■□□□□ 0.83
TMEM143-208ENST00000598258 UTRNP46939 3433 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms