RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-208ENST00000598059 DCAF5Q96JK2 942 aa29.09■■■□□ 2.25
SYMPK-208ENST00000598059 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.08■■■□□ 2.25
SYMPK-208ENST00000598059 PHF14O94880 888 aa29.08■■■□□ 2.25
SYMPK-208ENST00000598059 ATP6V1AP38606 617 aa29.08■■■□□ 2.25
SYMPK-208ENST00000598059 SMIM5Q71RC9 77 aa29.08■■■□□ 2.25
SYMPK-208ENST00000598059 SSFA2P28290 1259 aa29.07■■■□□ 2.24
SYMPK-208ENST00000598059 ZNF530Q6P9A1 599 aaPredicted RBP29.07■■■□□ 2.24
SYMPK-208ENST00000598059 ZNF784Q8NCA9 323 aaPredicted RBP29.07■■■□□ 2.24
SYMPK-208ENST00000598059 IL13P35225 146 aa29.06■■■□□ 2.24
SYMPK-208ENST00000598059 KDM6AO15550 1401 aaPredicted RBP29.05■■■□□ 2.24
SYMPK-208ENST00000598059 SULT6B1Q6IMI4 303 aa29.05■■■□□ 2.24
SYMPK-208ENST00000598059 PELP1Q8IZL8 1130 aaKnown RBP29.05■■■□□ 2.24
SYMPK-208ENST00000598059 KDRP35968 1356 aa29.04■■■□□ 2.24
SYMPK-208ENST00000598059 GNPATO15228 680 aa29.02■■■□□ 2.24
SYMPK-208ENST00000598059 PER1O15534 1290 aaPredicted RBP29.02■■■□□ 2.24
SYMPK-208ENST00000598059 CD2APQ9Y5K6 639 aa29.02■■■□□ 2.24
SYMPK-208ENST00000598059 ZNF831Q5JPB2 1677 aa29.02■■■□□ 2.24
SYMPK-208ENST00000598059 MTHFSP49914 203 aa29.01■■■□□ 2.23
SYMPK-208ENST00000598059 C1orf141Q5JVX7 400 aa29.01■■■□□ 2.23
SYMPK-208ENST00000598059 SLC4A9Q96Q91 983 aa29.01■■■□□ 2.23
SYMPK-208ENST00000598059 CABP4P57796 275 aa29■■■□□ 2.23
SYMPK-208ENST00000598059 YBX3P16989 372 aaKnown RBP eCLIP28.98■■■□□ 2.234e-8■□□□□ 9.5
SYMPK-208ENST00000598059 RBM42Q9BTD8 480 aaKnown RBP28.98■■■□□ 2.23
SYMPK-208ENST00000598059 COL5A3P25940 1745 aaPredicted RBP28.96■■■□□ 2.23
SYMPK-208ENST00000598059 GRIN3BO60391 1043 aa28.95■■■□□ 2.22
SYMPK-208ENST00000598059 SCN11AQ9UI33 1791 aa28.94■■■□□ 2.22
SYMPK-208ENST00000598059 CC2D1BQ5T0F9 858 aaKnown RBP28.94■■■□□ 2.22
SYMPK-208ENST00000598059 NFATC2IPQ8NCF5 419 aa28.94■■■□□ 2.22
SYMPK-208ENST00000598059 RTCBQ9Y3I0 505 aaKnown RBP28.94■■■□□ 2.22
SYMPK-208ENST00000598059 MYH14Q7Z406 1995 aaKnown RBP28.92■■■□□ 2.22
SYMPK-208ENST00000598059 RC3H1Q5TC82 1133 aaKnown RBP28.92■■■□□ 2.22
SYMPK-208ENST00000598059 TRAPPC3LQ5T215 181 aa28.91■■■□□ 2.22
SYMPK-208ENST00000598059 CNTNAP4Q9C0A0 1308 aa28.91■■■□□ 2.22
SYMPK-208ENST00000598059 AKAP4Q5JQC9 854 aa28.9■■■□□ 2.22
SYMPK-208ENST00000598059 PTCD1O75127 700 aaKnown RBP28.89■■■□□ 2.22
SYMPK-208ENST00000598059 HMOX1P09601 288 aa28.89■■■□□ 2.22
SYMPK-208ENST00000598059 ADRA2BP18089 450 aa28.88■■■□□ 2.21
SYMPK-208ENST00000598059 NPC1L1Q9UHC9 1359 aa28.88■■■□□ 2.21
SYMPK-208ENST00000598059 DIAPH1O60610 1272 aaKnown RBP28.87■■■□□ 2.21
SYMPK-208ENST00000598059 MMP10P09238 476 aa28.87■■■□□ 2.21
SYMPK-208ENST00000598059 ARHGEF1Q92888 912 aaKnown RBP28.87■■■□□ 2.21
SYMPK-208ENST00000598059 RPS6KA4O75676 772 aa28.86■■■□□ 2.21
SYMPK-208ENST00000598059 VIRMAQ69YN4 1812 aaKnown RBP28.85■■■□□ 2.21
SYMPK-208ENST00000598059 NLGN1Q8N2Q7 840 aa28.84■■■□□ 2.21
SYMPK-208ENST00000598059 SLC52A2Q9HAB3 445 aa28.84■■■□□ 2.21
SYMPK-208ENST00000598059 LGR6Q9HBX8 967 aa28.84■■■□□ 2.21
SYMPK-208ENST00000598059 CICQ96RK0 1608 aaPredicted RBP28.83■■■□□ 2.21
SYMPK-208ENST00000598059 TJP1Q07157 1748 aa28.83■■■□□ 2.21
SYMPK-208ENST00000598059 RFC4P35249 363 aa28.82■■■□□ 2.2
SYMPK-208ENST00000598059 CRKLP46109 303 aaKnown RBP28.82■■■□□ 2.2
SYMPK-208ENST00000598059 C4AP0C0L4 1744 aa28.82■■■□□ 2.2
SYMPK-208ENST00000598059 KIF13BQ9NQT8 1826 aa28.81■■■□□ 2.2
SYMPK-208ENST00000598059 RNMTO43148 476 aaKnown RBP28.81■■■□□ 2.2
SYMPK-208ENST00000598059 GYS1P13807 737 aa28.81■■■□□ 2.2
SYMPK-208ENST00000598059 CNGB1Q14028 1251 aaPredicted RBP28.81■■■□□ 2.2
SYMPK-208ENST00000598059 MTHFSDQ2M296 383 aaKnown RBP28.81■■■□□ 2.2
SYMPK-208ENST00000598059 COL3A1P02461 1466 aaPredicted RBP28.8■■■□□ 2.2
SYMPK-208ENST00000598059 MRC1P22897 1456 aa28.8■■■□□ 2.2
SYMPK-208ENST00000598059 WWC3Q9ULE0 1092 aa28.79■■■□□ 2.2
SYMPK-208ENST00000598059 ADAMTS7Q9UKP4 1686 aa28.78■■■□□ 2.2
SYMPK-208ENST00000598059 ZNF316A6NFI3 1004 aaPredicted RBP28.77■■■□□ 2.2
SYMPK-208ENST00000598059 C1QTNF8P60827 252 aa28.75■■■□□ 2.19
SYMPK-208ENST00000598059 SLC39A6Q13433 755 aa28.75■■■□□ 2.19
SYMPK-208ENST00000598059 INTS5Q6P9B9 1019 aaKnown RBP28.75■■■□□ 2.19
SYMPK-208ENST00000598059 KIAA1551Q9HCM1 1747 aa28.74■■■□□ 2.19
SYMPK-208ENST00000598059 PXDNLA1KZ92 1463 aa28.74■■■□□ 2.19
SYMPK-208ENST00000598059 C10orf71Q711Q0 1435 aa28.74■■■□□ 2.19
SYMPK-208ENST00000598059 N4BP2Q86UW6 1770 aaPredicted RBP28.73■■■□□ 2.19
SYMPK-208ENST00000598059 U2SURPO15042 1029 aaKnown RBP28.73■■■□□ 2.19
SYMPK-208ENST00000598059 TGFB2P61812 414 aa28.73■■■□□ 2.19
SYMPK-208ENST00000598059 DNAJC10Q8IXB1 793 aa28.73■■■□□ 2.19
SYMPK-208ENST00000598059 GIGYF1O75420 1035 aaPredicted RBP28.72■■■□□ 2.19
SYMPK-208ENST00000598059 SRP68Q9UHB9 627 aaKnown RBP28.72■■■□□ 2.19
SYMPK-208ENST00000598059 PARP3Q9Y6F1 533 aa28.72■■■□□ 2.19
SYMPK-208ENST00000598059 CEP350Q5VT06 3117 aa28.72■■■□□ 2.19
SYMPK-208ENST00000598059 KCPQ6ZWJ8 1503 aa28.72■■■□□ 2.19
SYMPK-208ENST00000598059 USP42Q9H9J4 1324 aaKnown RBP28.71■■■□□ 2.19
SYMPK-208ENST00000598059 CCDC87Q9NVE4 849 aa28.71■■■□□ 2.19
SYMPK-208ENST00000598059 ATP10DQ9P241 1426 aa28.69■■■□□ 2.18
SYMPK-208ENST00000598059 CYP19A1P11511 503 aaPredicted RBP28.69■■■□□ 2.18
SYMPK-208ENST00000598059 FKBP8Q14318 412 aa28.69■■■□□ 2.18
SYMPK-208ENST00000598059 ADCY9O60503 1353 aa28.68■■■□□ 2.18
SYMPK-208ENST00000598059 A0A0G2JLW4 131 aa28.68■■■□□ 2.18
SYMPK-208ENST00000598059 UBR2Q8IWV8 1755 aa28.67■■■□□ 2.18
SYMPK-208ENST00000598059 VSIG10Q8N0Z9 540 aa28.66■■■□□ 2.18
SYMPK-208ENST00000598059 GAS2L2Q8NHY3 880 aa28.66■■■□□ 2.18
SYMPK-208ENST00000598059 SOS1Q07889 1333 aaPredicted RBP28.66■■■□□ 2.18
SYMPK-208ENST00000598059 GNAT3A8MTJ3 354 aa28.65■■■□□ 2.18
SYMPK-208ENST00000598059 BRCA1P38398 1863 aaKnown RBP28.65■■■□□ 2.18
SYMPK-208ENST00000598059 DPEP1P16444 411 aa28.64■■■□□ 2.18
SYMPK-208ENST00000598059 DDR1Q08345 913 aa28.64■■■□□ 2.18
SYMPK-208ENST00000598059 IL17REQ8NFR9 667 aa28.64■■■□□ 2.18
SYMPK-208ENST00000598059 ZPR1O75312 459 aa28.63■■■□□ 2.17
SYMPK-208ENST00000598059 CFAP53Q96M91 514 aa28.63■■■□□ 2.17
SYMPK-208ENST00000598059 BCS1LQ9Y276 419 aa28.63■■■□□ 2.17
SYMPK-208ENST00000598059 USPL1Q5W0Q7 1092 aa28.62■■■□□ 2.17
SYMPK-208ENST00000598059 ZBTB1Q9Y2K1 713 aa28.62■■■□□ 2.17
SYMPK-208ENST00000598059 SIPA1L3O60292 1781 aaPredicted RBP28.61■■■□□ 2.17
SYMPK-208ENST00000598059 SENP3-EIF4A1A0A087X0R7 540 aa28.61■■■□□ 2.17
SYMPK-208ENST00000598059 TEFQ10587 303 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms