RNA–Protein interactions for RNA: ENST00000597977.5

SYDE1-202, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 2

Gene SYDE1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-202ENST00000597977 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
SYDE1-202ENST00000597977 ADCY9O60503 1353 aa18.22■□□□□ 0.51
SYDE1-202ENST00000597977 KDRP35968 1356 aa18.22■□□□□ 0.51
SYDE1-202ENST00000597977 CYP27B1O15528 508 aa18.22■□□□□ 0.51
SYDE1-202ENST00000597977 WWC3Q9ULE0 1092 aa18.22■□□□□ 0.51
SYDE1-202ENST00000597977 RALBP1Q15311 655 aa18.21■□□□□ 0.51
SYDE1-202ENST00000597977 PRKRIP1Q9H875 184 aaPredicted RBP18.21■□□□□ 0.51
SYDE1-202ENST00000597977 PALLDQ8WX93 1383 aa18.2■□□□□ 0.5
SYDE1-202ENST00000597977 U2SURPO15042 1029 aaKnown RBP18.2■□□□□ 0.5
SYDE1-202ENST00000597977 MIER1Q8N108 512 aa18.19■□□□□ 0.5
SYDE1-202ENST00000597977 CD2APQ9Y5K6 639 aa18.19■□□□□ 0.5
SYDE1-202ENST00000597977 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
SYDE1-202ENST00000597977 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
SYDE1-202ENST00000597977 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
SYDE1-202ENST00000597977 COL5A3P25940 1745 aaPredicted RBP18.17■□□□□ 0.5
SYDE1-202ENST00000597977 AMIGO3Q86WK7 504 aa18.15■□□□□ 0.5
SYDE1-202ENST00000597977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.15■□□□□ 0.5
SYDE1-202ENST00000597977 KIF3CO14782 793 aa18.14■□□□□ 0.49
SYDE1-202ENST00000597977 PHKG2P15735 406 aa18.14■□□□□ 0.49
SYDE1-202ENST00000597977 CCDC184Q52MB2 194 aa18.14■□□□□ 0.49
SYDE1-202ENST00000597977 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
SYDE1-202ENST00000597977 SPG7Q9UQ90 795 aa18.14■□□□□ 0.49
SYDE1-202ENST00000597977 C4AP0C0L4 1744 aa18.13■□□□□ 0.49
SYDE1-202ENST00000597977 U2AF1L5P0DN76 240 aaPredicted RBP18.13■□□□□ 0.49
SYDE1-202ENST00000597977 U2AF1Q01081 240 aaKnown RBP eCLIP18.13■□□□□ 0.49
SYDE1-202ENST00000597977 SMIM5Q71RC9 77 aa18.13■□□□□ 0.49
SYDE1-202ENST00000597977 RSPH6AQ9H0K4 717 aa18.13■□□□□ 0.49
SYDE1-202ENST00000597977 ZNF831Q5JPB2 1677 aa18.12■□□□□ 0.49
SYDE1-202ENST00000597977 KIAA1551Q9HCM1 1747 aa18.12■□□□□ 0.49
SYDE1-202ENST00000597977 PLEKHO1Q53GL0 409 aaPredicted RBP18.12■□□□□ 0.49
SYDE1-202ENST00000597977 ZNF530Q6P9A1 599 aaPredicted RBP18.12■□□□□ 0.49
SYDE1-202ENST00000597977 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
SYDE1-202ENST00000597977 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
SYDE1-202ENST00000597977 NKX1-1Q15270 411 aaPredicted RBP18.11■□□□□ 0.49
SYDE1-202ENST00000597977 MTHFSDQ2M296 383 aaKnown RBP18.11■□□□□ 0.49
SYDE1-202ENST00000597977 KDM6AO15550 1401 aaPredicted RBP18.11■□□□□ 0.49
SYDE1-202ENST00000597977 KIF13BQ9NQT8 1826 aa18.11■□□□□ 0.49
SYDE1-202ENST00000597977 MYH14Q7Z406 1995 aaKnown RBP18.11■□□□□ 0.49
SYDE1-202ENST00000597977 PLEKHG2Q9H7P9 1386 aa18.1■□□□□ 0.49
SYDE1-202ENST00000597977 CENPBP07199 599 aaPredicted RBP18.1■□□□□ 0.49
SYDE1-202ENST00000597977 IFNL2Q8IZJ0 200 aa18.1■□□□□ 0.49
SYDE1-202ENST00000597977 FLAD1Q8NFF5 587 aa18.1■□□□□ 0.49
SYDE1-202ENST00000597977 PIGBQ92521 554 aa18.1■□□□□ 0.49
SYDE1-202ENST00000597977 NUDCQ9Y266 331 aa18.1■□□□□ 0.49
SYDE1-202ENST00000597977 PHF14O94880 888 aa18.09■□□□□ 0.49
SYDE1-202ENST00000597977 SCN11AQ9UI33 1791 aa18.09■□□□□ 0.49
SYDE1-202ENST00000597977 APLP1P51693 650 aa18.08■□□□□ 0.48
SYDE1-202ENST00000597977 AMOTQ4VCS5 1084 aa18.08■□□□□ 0.48
SYDE1-202ENST00000597977 AK7Q96M32 723 aa18.08■□□□□ 0.48
SYDE1-202ENST00000597977 TJP1Q07157 1748 aa18.07■□□□□ 0.48
SYDE1-202ENST00000597977 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
SYDE1-202ENST00000597977 CICQ96RK0 1608 aaPredicted RBP18.06■□□□□ 0.48
SYDE1-202ENST00000597977 BRCA1P38398 1863 aaKnown RBP18.06■□□□□ 0.48
SYDE1-202ENST00000597977 DNAJC5GQ8N7S2 189 aa18.06■□□□□ 0.48
SYDE1-202ENST00000597977 LINC00116Q8NCU8 138 aa18.06■□□□□ 0.48
SYDE1-202ENST00000597977 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.05■□□□□ 0.48
SYDE1-202ENST00000597977 ANP32CO43423 234 aa18.04■□□□□ 0.48
SYDE1-202ENST00000597977 FCHSD2O94868 740 aa18.04■□□□□ 0.48
SYDE1-202ENST00000597977 ITPK1Q13572 414 aa18.04■□□□□ 0.48
SYDE1-202ENST00000597977 C1orf141Q5JVX7 400 aa18.04■□□□□ 0.48
SYDE1-202ENST00000597977 SMARCC1Q92922 1105 aaPredicted RBP18.04■□□□□ 0.48
SYDE1-202ENST00000597977 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
SYDE1-202ENST00000597977 LGR6Q9HBX8 967 aa18.04■□□□□ 0.48
SYDE1-202ENST00000597977 ASAP1Q9ULH1 1129 aa18.04■□□□□ 0.48
SYDE1-202ENST00000597977 LOC102724428A0A0B4J2F2 783 aa18.03■□□□□ 0.48
SYDE1-202ENST00000597977 SIK1P57059 783 aa18.03■□□□□ 0.48
SYDE1-202ENST00000597977 AKAP4Q5JQC9 854 aa18.02■□□□□ 0.48
SYDE1-202ENST00000597977 DCAF5Q96JK2 942 aa18.02■□□□□ 0.48
SYDE1-202ENST00000597977 TMOD3Q9NYL9 352 aa18.02■□□□□ 0.48
SYDE1-202ENST00000597977 ADAMTS7Q9UKP4 1686 aa18.02■□□□□ 0.47
SYDE1-202ENST00000597977 CCER2I3L3R5 266 aa18.01■□□□□ 0.47
SYDE1-202ENST00000597977 TOMM70O94826 608 aa18.01■□□□□ 0.47
SYDE1-202ENST00000597977 RNMTO43148 476 aaKnown RBP18■□□□□ 0.47
SYDE1-202ENST00000597977 CAPN15O75808 1086 aa18■□□□□ 0.47
SYDE1-202ENST00000597977 HTRA3P83110 453 aa18■□□□□ 0.47
SYDE1-202ENST00000597977 IL17REQ8NFR9 667 aa18■□□□□ 0.47
SYDE1-202ENST00000597977 NMRK2Q9NPI5 230 aa18■□□□□ 0.47
SYDE1-202ENST00000597977 ATG3Q9NT62 314 aa18■□□□□ 0.47
SYDE1-202ENST00000597977 ADAMTS8Q9UP79 889 aa18■□□□□ 0.47
SYDE1-202ENST00000597977 HSP90AB1P08238 724 aaKnown RBP17.99■□□□□ 0.47
SYDE1-202ENST00000597977 HMGB2P26583 209 aaKnown RBP17.99■□□□□ 0.47
SYDE1-202ENST00000597977 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
SYDE1-202ENST00000597977 GAS2L2Q8NHY3 880 aa17.99■□□□□ 0.47
SYDE1-202ENST00000597977 SLC4A9Q96Q91 983 aa17.99■□□□□ 0.47
SYDE1-202ENST00000597977 ERVV-2B6SEH9 535 aa17.98■□□□□ 0.47
SYDE1-202ENST00000597977 SSFA2P28290 1259 aa17.98■□□□□ 0.47
SYDE1-202ENST00000597977 COL13A1Q5TAT6 717 aaPredicted RBP17.98■□□□□ 0.47
SYDE1-202ENST00000597977 NFATC2IPQ8NCF5 419 aa17.98■□□□□ 0.47
SYDE1-202ENST00000597977 BCS1LQ9Y276 419 aa17.98■□□□□ 0.47
SYDE1-202ENST00000597977 MRC1P22897 1456 aa17.98■□□□□ 0.47
SYDE1-202ENST00000597977 PXDNLA1KZ92 1463 aa17.97■□□□□ 0.47
SYDE1-202ENST00000597977 GNAT3A8MTJ3 354 aa17.97■□□□□ 0.47
SYDE1-202ENST00000597977 GNPATO15228 680 aa17.97■□□□□ 0.47
SYDE1-202ENST00000597977 CABP4P57796 275 aa17.97■□□□□ 0.47
SYDE1-202ENST00000597977 DCTN1Q14203 1278 aa17.97■□□□□ 0.47
SYDE1-202ENST00000597977 DLG5Q8TDM6 1919 aa17.97■□□□□ 0.47
SYDE1-202ENST00000597977 MMP10P09238 476 aa17.96■□□□□ 0.47
SYDE1-202ENST00000597977 ATP6V1AP38606 617 aa17.96■□□□□ 0.47
SYDE1-202ENST00000597977 WDR43Q15061 677 aaKnown RBP eCLIP17.96■□□□□ 0.47
SYDE1-202ENST00000597977 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms