RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 PXDNLA1KZ92 1463 aa22.48■■□□□ 1.19
CAPN12-208ENST00000597740 MAP2P11137 1827 aaKnown RBP22.48■■□□□ 1.19
CAPN12-208ENST00000597740 TOMM70O94826 608 aa22.48■■□□□ 1.19
CAPN12-208ENST00000597740 ITPK1Q13572 414 aa22.48■■□□□ 1.19
CAPN12-208ENST00000597740 TMOD3Q9NYL9 352 aa22.48■■□□□ 1.19
CAPN12-208ENST00000597740 BCS1LQ9Y276 419 aa22.48■■□□□ 1.19
CAPN12-208ENST00000597740 NKX1-1Q15270 411 aaPredicted RBP22.47■■□□□ 1.19
CAPN12-208ENST00000597740 ASAP1Q9ULH1 1129 aa22.47■■□□□ 1.19
CAPN12-208ENST00000597740 SPG7Q9UQ90 795 aa22.47■■□□□ 1.19
CAPN12-208ENST00000597740 ATP6V1AP38606 617 aa22.46■■□□□ 1.19
CAPN12-208ENST00000597740 DNAJC5GQ8N7S2 189 aa22.46■■□□□ 1.19
CAPN12-208ENST00000597740 EMILIN1Q9Y6C2 1016 aa22.46■■□□□ 1.19
CAPN12-208ENST00000597740 A0A0G2JLW4 131 aa22.45■■□□□ 1.18
CAPN12-208ENST00000597740 KIF20BQ96Q89 1820 aa22.45■■□□□ 1.18
CAPN12-208ENST00000597740 PPM1GO15355 546 aaPredicted RBP22.44■■□□□ 1.18
CAPN12-208ENST00000597740 ARHGAP27Q6ZUM4 889 aa22.44■■□□□ 1.18
CAPN12-208ENST00000597740 NMRK2Q9NPI5 230 aa22.44■■□□□ 1.18
CAPN12-208ENST00000597740 KNSTRNQ9Y448 316 aa22.44■■□□□ 1.18
CAPN12-208ENST00000597740 TGFB2P61812 414 aa22.43■■□□□ 1.18
CAPN12-208ENST00000597740 NCAPD2Q15021 1401 aa22.42■■□□□ 1.18
CAPN12-208ENST00000597740 N4BP2Q86UW6 1770 aaPredicted RBP22.42■■□□□ 1.18
CAPN12-208ENST00000597740 KIAA1551Q9HCM1 1747 aa22.42■■□□□ 1.18
CAPN12-208ENST00000597740 KIF13BQ9NQT8 1826 aa22.41■■□□□ 1.18
CAPN12-208ENST00000597740 AMER1Q5JTC6 1135 aaPredicted RBP22.41■■□□□ 1.18
CAPN12-208ENST00000597740 C10orf71Q711Q0 1435 aa22.4■■□□□ 1.18
CAPN12-208ENST00000597740 TRAPPC3LQ5T215 181 aa22.4■■□□□ 1.18
CAPN12-208ENST00000597740 NLGN1Q8N2Q7 840 aa22.4■■□□□ 1.18
CAPN12-208ENST00000597740 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
CAPN12-208ENST00000597740 RTCBQ9Y3I0 505 aaKnown RBP22.4■■□□□ 1.18
CAPN12-208ENST00000597740 FCHSD2O94868 740 aa22.39■■□□□ 1.17
CAPN12-208ENST00000597740 DPEP1P16444 411 aa22.39■■□□□ 1.17
CAPN12-208ENST00000597740 DIEXFQ68CQ4 756 aaKnown RBP22.39■■□□□ 1.17
CAPN12-208ENST00000597740 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
CAPN12-208ENST00000597740 PHKG2P15735 406 aa22.38■■□□□ 1.17
CAPN12-208ENST00000597740 IFNL2Q8IZJ0 200 aa22.38■■□□□ 1.17
CAPN12-208ENST00000597740 EYA1Q99502 592 aa22.38■■□□□ 1.17
CAPN12-208ENST00000597740 CCDC87Q9NVE4 849 aa22.38■■□□□ 1.17
CAPN12-208ENST00000597740 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.38■■□□□ 1.17
CAPN12-208ENST00000597740 HTRA3P83110 453 aa22.37■■□□□ 1.17
CAPN12-208ENST00000597740 C16orf71Q8IYS4 520 aaPredicted RBP22.37■■□□□ 1.17
CAPN12-208ENST00000597740 RBM46Q8TBY0 533 aaKnown RBP22.36■■□□□ 1.17
CAPN12-208ENST00000597740 WDR90Q96KV7 1748 aa22.36■■□□□ 1.17
CAPN12-208ENST00000597740 KDRP35968 1356 aa22.36■■□□□ 1.17
CAPN12-208ENST00000597740 C9orf131Q5VYM1 1079 aa22.35■■□□□ 1.17
CAPN12-208ENST00000597740 ARHGEF1Q92888 912 aaKnown RBP22.35■■□□□ 1.17
CAPN12-208ENST00000597740 RBM42Q9BTD8 480 aaKnown RBP22.35■■□□□ 1.17
CAPN12-208ENST00000597740 C4AP0C0L4 1744 aa22.34■■□□□ 1.17
CAPN12-208ENST00000597740 PARP3Q9Y6F1 533 aa22.34■■□□□ 1.17
CAPN12-208ENST00000597740 GYS1P13807 737 aa22.33■■□□□ 1.17
CAPN12-208ENST00000597740 RFC4P35249 363 aa22.33■■□□□ 1.17
CAPN12-208ENST00000597740 KLRG1Q96E93 195 aa22.33■■□□□ 1.17
CAPN12-208ENST00000597740 SLC4A9Q96Q91 983 aa22.33■■□□□ 1.17
CAPN12-208ENST00000597740 ADRA2BP18089 450 aa22.32■■□□□ 1.16
CAPN12-208ENST00000597740 COL13A1Q5TAT6 717 aaPredicted RBP22.32■■□□□ 1.16
CAPN12-208ENST00000597740 PLEKHG2Q9H7P9 1386 aa22.32■■□□□ 1.16
CAPN12-208ENST00000597740 ANKRD26Q9UPS8 1709 aa22.31■■□□□ 1.16
CAPN12-208ENST00000597740 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
CAPN12-208ENST00000597740 KCNA3P22001 575 aa22.3■■□□□ 1.16
CAPN12-208ENST00000597740 FSTL1Q12841 308 aa22.3■■□□□ 1.16
CAPN12-208ENST00000597740 RC3H1Q5TC82 1133 aaKnown RBP22.3■■□□□ 1.16
CAPN12-208ENST00000597740 KCPQ6ZWJ8 1503 aa22.3■■□□□ 1.16
CAPN12-208ENST00000597740 CNTNAP4Q9C0A0 1308 aa22.3■■□□□ 1.16
CAPN12-208ENST00000597740 BRCA1P38398 1863 aaKnown RBP22.29■■□□□ 1.16
CAPN12-208ENST00000597740 RPS6KA4O75676 772 aa22.29■■□□□ 1.16
CAPN12-208ENST00000597740 CAPN15O75808 1086 aa22.29■■□□□ 1.16
CAPN12-208ENST00000597740 PIM2Q9P1W9 311 aa22.29■■□□□ 1.16
CAPN12-208ENST00000597740 KDM2BQ8NHM5 1336 aa22.29■■□□□ 1.16
CAPN12-208ENST00000597740 JMYQ8N9B5 988 aa22.28■■□□□ 1.16
CAPN12-208ENST00000597740 RNF181Q9P0P0 153 aa22.28■■□□□ 1.16
CAPN12-208ENST00000597740 COL5A3P25940 1745 aaPredicted RBP22.27■■□□□ 1.16
CAPN12-208ENST00000597740 CNGB1Q14028 1251 aaPredicted RBP22.27■■□□□ 1.16
CAPN12-208ENST00000597740 PRKRIP1Q9H875 184 aaPredicted RBP22.27■■□□□ 1.16
CAPN12-208ENST00000597740 POLKQ9UBT6 870 aa22.27■■□□□ 1.16
CAPN12-208ENST00000597740 ZNF831Q5JPB2 1677 aa22.26■■□□□ 1.15
CAPN12-208ENST00000597740 ERVV-2B6SEH9 535 aa22.26■■□□□ 1.15
CAPN12-208ENST00000597740 ANP32CO43423 234 aa22.26■■□□□ 1.15
CAPN12-208ENST00000597740 EIF4A2Q14240 407 aaKnown RBP22.26■■□□□ 1.15
CAPN12-208ENST00000597740 DALRD3Q5D0E6 543 aaKnown RBP22.26■■□□□ 1.15
CAPN12-208ENST00000597740 MORC1Q86VD1 984 aa22.26■■□□□ 1.15
CAPN12-208ENST00000597740 DCAF5Q96JK2 942 aa22.26■■□□□ 1.15
CAPN12-208ENST00000597740 RRAGCQ9HB90 399 aa22.26■■□□□ 1.15
CAPN12-208ENST00000597740 ARFGEF1Q9Y6D6 1849 aa22.25■■□□□ 1.15
CAPN12-208ENST00000597740 RALBP1Q15311 655 aa22.25■■□□□ 1.15
CAPN12-208ENST00000597740 SRP68Q9UHB9 627 aaKnown RBP22.24■■□□□ 1.15
CAPN12-208ENST00000597740 HSP90AB1P08238 724 aaKnown RBP22.23■■□□□ 1.15
CAPN12-208ENST00000597740 TNNT2P45379 298 aaPredicted RBP22.23■■□□□ 1.15
CAPN12-208ENST00000597740 CABP4P57796 275 aa22.23■■□□□ 1.15
CAPN12-208ENST00000597740 PTCD1O75127 700 aaKnown RBP22.22■■□□□ 1.15
CAPN12-208ENST00000597740 CHRNA5P30532 468 aa22.22■■□□□ 1.15
CAPN12-208ENST00000597740 DDR1Q08345 913 aa22.22■■□□□ 1.15
CAPN12-208ENST00000597740 FKBP8Q14318 412 aa22.22■■□□□ 1.15
CAPN12-208ENST00000597740 TNS4Q8IZW8 715 aa22.22■■□□□ 1.15
CAPN12-208ENST00000597740 KDM6AO15550 1401 aaPredicted RBP22.21■■□□□ 1.15
CAPN12-208ENST00000597740 CRKLP46109 303 aaKnown RBP22.2■■□□□ 1.14
CAPN12-208ENST00000597740 SMC1BQ8NDV3 1235 aa22.2■■□□□ 1.14
CAPN12-208ENST00000597740 USP42Q9H9J4 1324 aaKnown RBP22.2■■□□□ 1.14
CAPN12-208ENST00000597740 MYH14Q7Z406 1995 aaKnown RBP22.19■■□□□ 1.14
CAPN12-208ENST00000597740 PLEKHO1Q53GL0 409 aaPredicted RBP22.19■■□□□ 1.14
CAPN12-208ENST00000597740 ZNF530Q6P9A1 599 aaPredicted RBP22.19■■□□□ 1.14
CAPN12-208ENST00000597740 TNRC6CQ9HCJ0 1690 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms