RNA–Protein interactions for RNA: ENST00000597687.1

SH2D3A-207, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 859 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-207ENST00000597687 C1orf141Q5JVX7 400 aa20.06■□□□□ 0.8
SH2D3A-207ENST00000597687 ERVV-2B6SEH9 535 aa20.05■□□□□ 0.8
SH2D3A-207ENST00000597687 ADRA2BP18089 450 aa20.05■□□□□ 0.8
SH2D3A-207ENST00000597687 EIF4A2Q14240 407 aaKnown RBP20.05■□□□□ 0.8
SH2D3A-207ENST00000597687 TRAPPC3LQ5T215 181 aa20.05■□□□□ 0.8
SH2D3A-207ENST00000597687 DCAF5Q96JK2 942 aa20.05■□□□□ 0.8
SH2D3A-207ENST00000597687 RBM42Q9BTD8 480 aaKnown RBP20.05■□□□□ 0.8
SH2D3A-207ENST00000597687 ASAP1Q9ULH1 1129 aa20.05■□□□□ 0.8
SH2D3A-207ENST00000597687 ZNF831Q5JPB2 1677 aa20.05■□□□□ 0.8
SH2D3A-207ENST00000597687 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
SH2D3A-207ENST00000597687 MMP10P09238 476 aa20.03■□□□□ 0.8
SH2D3A-207ENST00000597687 CABP4P57796 275 aa20.03■□□□□ 0.8
SH2D3A-207ENST00000597687 ZNF530Q6P9A1 599 aaPredicted RBP20.03■□□□□ 0.8
SH2D3A-207ENST00000597687 NLGN1Q8N2Q7 840 aa20.03■□□□□ 0.8
SH2D3A-207ENST00000597687 ZNF526Q8TF50 670 aaPredicted RBP20.03■□□□□ 0.8
SH2D3A-207ENST00000597687 CCDC87Q9NVE4 849 aa20.03■□□□□ 0.8
SH2D3A-207ENST00000597687 RFC4P35249 363 aa20.02■□□□□ 0.8
SH2D3A-207ENST00000597687 ATG3Q9NT62 314 aa20.02■□□□□ 0.8
SH2D3A-207ENST00000597687 CICQ96RK0 1608 aaPredicted RBP20.02■□□□□ 0.79
SH2D3A-207ENST00000597687 ADCY9O60503 1353 aa20.01■□□□□ 0.79
SH2D3A-207ENST00000597687 ITPK1Q13572 414 aa20.01■□□□□ 0.79
SH2D3A-207ENST00000597687 WWC3Q9ULE0 1092 aa20.01■□□□□ 0.79
SH2D3A-207ENST00000597687 KDRP35968 1356 aa20■□□□□ 0.79
SH2D3A-207ENST00000597687 COL5A3P25940 1745 aaPredicted RBP20■□□□□ 0.79
SH2D3A-207ENST00000597687 MORC1Q86VD1 984 aa20■□□□□ 0.79
SH2D3A-207ENST00000597687 PARP3Q9Y6F1 533 aa20■□□□□ 0.79
SH2D3A-207ENST00000597687 CNTNAP4Q9C0A0 1308 aa20■□□□□ 0.79
SH2D3A-207ENST00000597687 KIF13BQ9NQT8 1826 aa19.99■□□□□ 0.79
SH2D3A-207ENST00000597687 KNSTRNQ9Y448 316 aa19.99■□□□□ 0.79
SH2D3A-207ENST00000597687 MTHFSP49914 203 aa19.98■□□□□ 0.79
SH2D3A-207ENST00000597687 TGFB2P61812 414 aa19.98■□□□□ 0.79
SH2D3A-207ENST00000597687 RC3H1Q5TC82 1133 aaKnown RBP19.98■□□□□ 0.79
SH2D3A-207ENST00000597687 AMIGO3Q86WK7 504 aa19.98■□□□□ 0.79
SH2D3A-207ENST00000597687 PANK3Q9H999 370 aa19.98■□□□□ 0.79
SH2D3A-207ENST00000597687 C4AP0C0L4 1744 aa19.97■□□□□ 0.79
SH2D3A-207ENST00000597687 BCS1LQ9Y276 419 aa19.97■□□□□ 0.79
SH2D3A-207ENST00000597687 C10orf71Q711Q0 1435 aa19.96■□□□□ 0.79
SH2D3A-207ENST00000597687 PXDNLA1KZ92 1463 aa19.96■□□□□ 0.79
SH2D3A-207ENST00000597687 N4BP2Q86UW6 1770 aaPredicted RBP19.95■□□□□ 0.78
SH2D3A-207ENST00000597687 SMIM5Q71RC9 77 aa19.95■□□□□ 0.78
SH2D3A-207ENST00000597687 HSPA5P11021 654 aaKnown RBP19.94■□□□□ 0.78
SH2D3A-207ENST00000597687 HSPA6P17066 643 aa19.94■□□□□ 0.78
SH2D3A-207ENST00000597687 RPS6KA4O75676 772 aa19.93■□□□□ 0.78
SH2D3A-207ENST00000597687 KDM6AO15550 1401 aaPredicted RBP19.93■□□□□ 0.78
SH2D3A-207ENST00000597687 CEP350Q5VT06 3117 aa19.92■□□□□ 0.78
SH2D3A-207ENST00000597687 PTCD1O75127 700 aaKnown RBP19.92■□□□□ 0.78
SH2D3A-207ENST00000597687 FCHSD2O94868 740 aa19.91■□□□□ 0.78
SH2D3A-207ENST00000597687 SULT6B1Q6IMI4 303 aa19.91■□□□□ 0.78
SH2D3A-207ENST00000597687 ARHGEF1Q92888 912 aaKnown RBP19.91■□□□□ 0.78
SH2D3A-207ENST00000597687 SCN11AQ9UI33 1791 aa19.9■□□□□ 0.78
SH2D3A-207ENST00000597687 ARHGAP27Q6ZUM4 889 aa19.9■□□□□ 0.78
SH2D3A-207ENST00000597687 C16orf71Q8IYS4 520 aaPredicted RBP19.9■□□□□ 0.78
SH2D3A-207ENST00000597687 CCER1Q8TC90 406 aaPredicted RBP19.9■□□□□ 0.78
SH2D3A-207ENST00000597687 ZPR1O75312 459 aa19.89■□□□□ 0.77
SH2D3A-207ENST00000597687 GYS1P13807 737 aa19.89■□□□□ 0.77
SH2D3A-207ENST00000597687 ARFGEF1Q9Y6D6 1849 aa19.89■□□□□ 0.77
SH2D3A-207ENST00000597687 A0A0G2JLW4 131 aa19.88■□□□□ 0.77
SH2D3A-207ENST00000597687 CRKLP46109 303 aaKnown RBP19.88■□□□□ 0.77
SH2D3A-207ENST00000597687 KIAA1551Q9HCM1 1747 aa19.88■□□□□ 0.77
SH2D3A-207ENST00000597687 MYH14Q7Z406 1995 aaKnown RBP19.87■□□□□ 0.77
SH2D3A-207ENST00000597687 AKAP4Q5JQC9 854 aa19.87■□□□□ 0.77
SH2D3A-207ENST00000597687 AEBP1Q8IUX7 1158 aa19.87■□□□□ 0.77
SH2D3A-207ENST00000597687 NFATC2IPQ8NCF5 419 aa19.87■□□□□ 0.77
SH2D3A-207ENST00000597687 PIM2Q9P1W9 311 aa19.87■□□□□ 0.77
SH2D3A-207ENST00000597687 BRCA1P38398 1863 aaKnown RBP19.87■□□□□ 0.77
SH2D3A-207ENST00000597687 USP42Q9H9J4 1324 aaKnown RBP19.86■□□□□ 0.77
SH2D3A-207ENST00000597687 TJP1Q07157 1748 aa19.86■□□□□ 0.77
SH2D3A-207ENST00000597687 DPEP1P16444 411 aa19.86■□□□□ 0.77
SH2D3A-207ENST00000597687 APLP1P51693 650 aa19.85■□□□□ 0.77
SH2D3A-207ENST00000597687 DALRD3Q5D0E6 543 aaKnown RBP19.85■□□□□ 0.77
SH2D3A-207ENST00000597687 SLC4A9Q96Q91 983 aa19.85■□□□□ 0.77
SH2D3A-207ENST00000597687 KDM2BQ8NHM5 1336 aa19.84■□□□□ 0.77
SH2D3A-207ENST00000597687 VIRMAQ69YN4 1812 aaKnown RBP19.84■□□□□ 0.77
SH2D3A-207ENST00000597687 TOMM70O94826 608 aa19.83■□□□□ 0.77
SH2D3A-207ENST00000597687 KIF3CO14782 793 aa19.82■□□□□ 0.76
SH2D3A-207ENST00000597687 IFFO2Q5TF58 517 aa19.82■□□□□ 0.76
SH2D3A-207ENST00000597687 SLC52A2Q9HAB3 445 aa19.82■□□□□ 0.76
SH2D3A-207ENST00000597687 IL13P35225 146 aa19.81■□□□□ 0.76
SH2D3A-207ENST00000597687 NPM2Q86SE8 214 aaKnown RBP19.81■□□□□ 0.76
SH2D3A-207ENST00000597687 TTC5Q8N0Z6 440 aa19.81■□□□□ 0.76
SH2D3A-207ENST00000597687 MRC1P22897 1456 aa19.8■□□□□ 0.76
SH2D3A-207ENST00000597687 TNRC6CQ9HCJ0 1690 aaKnown RBP19.79■□□□□ 0.76
SH2D3A-207ENST00000597687 FKBP8Q14318 412 aa19.79■□□□□ 0.76
SH2D3A-207ENST00000597687 C9orf131Q5VYM1 1079 aa19.79■□□□□ 0.76
SH2D3A-207ENST00000597687 SRP68Q9UHB9 627 aaKnown RBP19.79■□□□□ 0.76
SH2D3A-207ENST00000597687 COL15A1P39059 1388 aa19.79■□□□□ 0.76
SH2D3A-207ENST00000597687 DIAPH1O60610 1272 aaKnown RBP19.78■□□□□ 0.76
SH2D3A-207ENST00000597687 RNF181Q9P0P0 153 aa19.78■□□□□ 0.76
SH2D3A-207ENST00000597687 DNAJC10Q8IXB1 793 aa19.77■□□□□ 0.76
SH2D3A-207ENST00000597687 SOS1Q07889 1333 aaPredicted RBP19.76■□□□□ 0.75
SH2D3A-207ENST00000597687 STARD3NLO95772 234 aa19.76■□□□□ 0.75
SH2D3A-207ENST00000597687 HMOX1P09601 288 aa19.76■□□□□ 0.75
SH2D3A-207ENST00000597687 USPL1Q5W0Q7 1092 aa19.76■□□□□ 0.75
SH2D3A-207ENST00000597687 RBM46Q8TBY0 533 aaKnown RBP19.76■□□□□ 0.75
SH2D3A-207ENST00000597687 ZC3H4Q9UPT8 1303 aaKnown RBP19.76■□□□□ 0.75
SH2D3A-207ENST00000597687 A0A087WZG4 1122 aa19.75■□□□□ 0.75
SH2D3A-207ENST00000597687 RNMTO43148 476 aaKnown RBP19.75■□□□□ 0.75
SH2D3A-207ENST00000597687 DDR1Q08345 913 aa19.75■□□□□ 0.75
SH2D3A-207ENST00000597687 VSIG10Q8N0Z9 540 aa19.75■□□□□ 0.75
SH2D3A-207ENST00000597687 POLRMTO00411 1230 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms