RNA–Protein interactions for RNA: ENST00000597071.5

LTBP4-216, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-216ENST00000597071 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
LTBP4-216ENST00000597071 FLAD1Q8NFF5 587 aa17.66■□□□□ 0.42
LTBP4-216ENST00000597071 COL5A3P25940 1745 aaPredicted RBP17.65■□□□□ 0.42
LTBP4-216ENST00000597071 LINC00116Q8NCU8 138 aa17.65■□□□□ 0.42
LTBP4-216ENST00000597071 AK7Q96M32 723 aa17.65■□□□□ 0.42
LTBP4-216ENST00000597071 VIRMAQ69YN4 1812 aaKnown RBP17.65■□□□□ 0.42
LTBP4-216ENST00000597071 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.42
LTBP4-216ENST00000597071 MRC1P22897 1456 aa17.64■□□□□ 0.41
LTBP4-216ENST00000597071 ITPK1Q13572 414 aa17.64■□□□□ 0.41
LTBP4-216ENST00000597071 AMIGO3Q86WK7 504 aa17.64■□□□□ 0.41
LTBP4-216ENST00000597071 CICQ96RK0 1608 aaPredicted RBP17.64■□□□□ 0.41
LTBP4-216ENST00000597071 MSH5O43196 834 aa17.63■□□□□ 0.41
LTBP4-216ENST00000597071 HMOX1P09601 288 aa17.63■□□□□ 0.41
LTBP4-216ENST00000597071 GOLGB1Q14789 3259 aaKnown RBP17.62■□□□□ 0.41
LTBP4-216ENST00000597071 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
LTBP4-216ENST00000597071 ATP6V1AP38606 617 aa17.62■□□□□ 0.41
LTBP4-216ENST00000597071 CABP4P57796 275 aa17.62■□□□□ 0.41
LTBP4-216ENST00000597071 CNGB1Q14028 1251 aaPredicted RBP17.62■□□□□ 0.41
LTBP4-216ENST00000597071 AKAP4Q5JQC9 854 aa17.62■□□□□ 0.41
LTBP4-216ENST00000597071 SSFA2P28290 1259 aa17.61■□□□□ 0.41
LTBP4-216ENST00000597071 SLC4A9Q96Q91 983 aa17.61■□□□□ 0.41
LTBP4-216ENST00000597071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.6■□□□□ 0.41
LTBP4-216ENST00000597071 MSL1Q68DK7 614 aa17.6■□□□□ 0.41
LTBP4-216ENST00000597071 TJP1Q07157 1748 aa17.59■□□□□ 0.41
LTBP4-216ENST00000597071 CNTNAP4Q9C0A0 1308 aa17.58■□□□□ 0.4
LTBP4-216ENST00000597071 GNPATO15228 680 aa17.58■□□□□ 0.4
LTBP4-216ENST00000597071 PHF14O94880 888 aa17.58■□□□□ 0.4
LTBP4-216ENST00000597071 MTHFSDQ2M296 383 aaKnown RBP17.58■□□□□ 0.4
LTBP4-216ENST00000597071 NFATC2IPQ8NCF5 419 aa17.58■□□□□ 0.4
LTBP4-216ENST00000597071 MYH14Q7Z406 1995 aaKnown RBP17.58■□□□□ 0.4
LTBP4-216ENST00000597071 SMIM5Q71RC9 77 aa17.57■□□□□ 0.4
LTBP4-216ENST00000597071 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
LTBP4-216ENST00000597071 U2SURPO15042 1029 aaKnown RBP17.56■□□□□ 0.4
LTBP4-216ENST00000597071 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
LTBP4-216ENST00000597071 RC3H1Q5TC82 1133 aaKnown RBP17.56■□□□□ 0.4
LTBP4-216ENST00000597071 KLHL34Q8N239 644 aa17.56■□□□□ 0.4
LTBP4-216ENST00000597071 SLC52A2Q9HAB3 445 aa17.56■□□□□ 0.4
LTBP4-216ENST00000597071 C4AP0C0L4 1744 aa17.55■□□□□ 0.4
LTBP4-216ENST00000597071 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
LTBP4-216ENST00000597071 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
LTBP4-216ENST00000597071 LGR6Q9HBX8 967 aa17.55■□□□□ 0.4
LTBP4-216ENST00000597071 CHD4Q14839 1912 aa17.55■□□□□ 0.4
LTBP4-216ENST00000597071 UBR2Q8IWV8 1755 aa17.54■□□□□ 0.4
LTBP4-216ENST00000597071 KCPQ6ZWJ8 1503 aa17.54■□□□□ 0.4
LTBP4-216ENST00000597071 NLGN2Q8NFZ4 835 aa17.54■□□□□ 0.4
LTBP4-216ENST00000597071 PTCD1O75127 700 aaKnown RBP17.53■□□□□ 0.4
LTBP4-216ENST00000597071 ADRA2BP18089 450 aa17.53■□□□□ 0.4
LTBP4-216ENST00000597071 RTCBQ9Y3I0 505 aaKnown RBP17.53■□□□□ 0.4
LTBP4-216ENST00000597071 SIPA1L3O60292 1781 aaPredicted RBP17.53■□□□□ 0.4
LTBP4-216ENST00000597071 GAS2L2Q8NHY3 880 aa17.52■□□□□ 0.4
LTBP4-216ENST00000597071 RSPH6AQ9H0K4 717 aa17.51■□□□□ 0.39
LTBP4-216ENST00000597071 RPS6KA4O75676 772 aa17.5■□□□□ 0.39
LTBP4-216ENST00000597071 TRAPPC3LQ5T215 181 aa17.5■□□□□ 0.39
LTBP4-216ENST00000597071 NUDCQ9Y266 331 aa17.5■□□□□ 0.39
LTBP4-216ENST00000597071 CD2APQ9Y5K6 639 aa17.5■□□□□ 0.39
LTBP4-216ENST00000597071 PRKAR2BP31323 418 aa17.49■□□□□ 0.39
LTBP4-216ENST00000597071 CRKLP46109 303 aaKnown RBP17.49■□□□□ 0.39
LTBP4-216ENST00000597071 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
LTBP4-216ENST00000597071 SLC39A6Q13433 755 aa17.48■□□□□ 0.39
LTBP4-216ENST00000597071 GPR162Q16538 588 aa17.48■□□□□ 0.39
LTBP4-216ENST00000597071 ARHGEF1Q92888 912 aaKnown RBP17.48■□□□□ 0.39
LTBP4-216ENST00000597071 KIF13BQ9NQT8 1826 aa17.48■□□□□ 0.39
LTBP4-216ENST00000597071 CEMIPQ8WUJ3 1361 aa17.47■□□□□ 0.39
LTBP4-216ENST00000597071 MMP10P09238 476 aa17.46■□□□□ 0.39
LTBP4-216ENST00000597071 U2AF1L5P0DN76 240 aaPredicted RBP17.46■□□□□ 0.39
LTBP4-216ENST00000597071 U2AF1Q01081 240 aaKnown RBP eCLIP17.46■□□□□ 0.39
LTBP4-216ENST00000597071 DNAJC10Q8IXB1 793 aa17.46■□□□□ 0.39
LTBP4-216ENST00000597071 IL17REQ8NFR9 667 aa17.46■□□□□ 0.39
LTBP4-216ENST00000597071 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
LTBP4-216ENST00000597071 GYS1P13807 737 aa17.45■□□□□ 0.38
LTBP4-216ENST00000597071 RFC4P35249 363 aa17.45■□□□□ 0.38
LTBP4-216ENST00000597071 INTS5Q6P9B9 1019 aaKnown RBP17.45■□□□□ 0.38
LTBP4-216ENST00000597071 VSIG10Q8N0Z9 540 aa17.45■□□□□ 0.38
LTBP4-216ENST00000597071 NLGN1Q8N2Q7 840 aa17.45■□□□□ 0.38
LTBP4-216ENST00000597071 KIAA1551Q9HCM1 1747 aa17.44■□□□□ 0.38
LTBP4-216ENST00000597071 FCHSD2O94868 740 aa17.44■□□□□ 0.38
LTBP4-216ENST00000597071 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
LTBP4-216ENST00000597071 TEFQ10587 303 aa17.44■□□□□ 0.38
LTBP4-216ENST00000597071 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
LTBP4-216ENST00000597071 CCDC87Q9NVE4 849 aa17.44■□□□□ 0.38
LTBP4-216ENST00000597071 C10orf71Q711Q0 1435 aa17.44■□□□□ 0.38
LTBP4-216ENST00000597071 SOS1Q07889 1333 aaPredicted RBP17.44■□□□□ 0.38
LTBP4-216ENST00000597071 USP42Q9H9J4 1324 aaKnown RBP17.44■□□□□ 0.38
LTBP4-216ENST00000597071 CYP19A1P11511 503 aaPredicted RBP17.43■□□□□ 0.38
LTBP4-216ENST00000597071 TTC5Q8N0Z6 440 aa17.42■□□□□ 0.38
LTBP4-216ENST00000597071 ZNF790Q6PG37 636 aa17.41■□□□□ 0.38
LTBP4-216ENST00000597071 SRP68Q9UHB9 627 aaKnown RBP17.41■□□□□ 0.38
LTBP4-216ENST00000597071 PXDNLA1KZ92 1463 aa17.41■□□□□ 0.38
LTBP4-216ENST00000597071 HEG1Q9ULI3 1381 aa17.4■□□□□ 0.38
LTBP4-216ENST00000597071 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
LTBP4-216ENST00000597071 ZNF784Q8NCA9 323 aaPredicted RBP17.4■□□□□ 0.38
LTBP4-216ENST00000597071 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
LTBP4-216ENST00000597071 COL15A1P39059 1388 aa17.4■□□□□ 0.38
LTBP4-216ENST00000597071 ZNF496Q96IT1 587 aaPredicted RBP17.39■□□□□ 0.37
LTBP4-216ENST00000597071 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
LTBP4-216ENST00000597071 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
LTBP4-216ENST00000597071 BRCA1P38398 1863 aaKnown RBP17.38■□□□□ 0.37
LTBP4-216ENST00000597071 FKBP8Q14318 412 aa17.38■□□□□ 0.37
LTBP4-216ENST00000597071 SCN7AQ01118 1682 aa17.37■□□□□ 0.37
LTBP4-216ENST00000597071 STARD3NLO95772 234 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms