RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 KDRP35968 1356 aa21.46■■□□□ 1.03
PSMC4-204ENST00000596386 ERVV-2B6SEH9 535 aa21.45■■□□□ 1.02
PSMC4-204ENST00000596386 ATP6V1AP38606 617 aa21.45■■□□□ 1.02
PSMC4-204ENST00000596386 AMOTQ4VCS5 1084 aa21.45■■□□□ 1.02
PSMC4-204ENST00000596386 CD2APQ9Y5K6 639 aa21.45■■□□□ 1.02
PSMC4-204ENST00000596386 KDM6AO15550 1401 aaPredicted RBP21.45■■□□□ 1.02
PSMC4-204ENST00000596386 ZNF831Q5JPB2 1677 aa21.44■■□□□ 1.02
PSMC4-204ENST00000596386 ZNF530Q6P9A1 599 aaPredicted RBP21.44■■□□□ 1.02
PSMC4-204ENST00000596386 SMIM5Q71RC9 77 aa21.44■■□□□ 1.02
PSMC4-204ENST00000596386 AEBP1Q8IUX7 1158 aa21.44■■□□□ 1.02
PSMC4-204ENST00000596386 GNPATO15228 680 aa21.43■■□□□ 1.02
PSMC4-204ENST00000596386 YBX3P16989 372 aaKnown RBP eCLIP21.43■■□□□ 1.025e-7■□□□□ 9.7
PSMC4-204ENST00000596386 AMER1Q5JTC6 1135 aaPredicted RBP21.43■■□□□ 1.02
PSMC4-204ENST00000596386 KIF7Q2M1P5 1343 aa21.43■■□□□ 1.02
PSMC4-204ENST00000596386 GRIN3BO60391 1043 aa21.41■■□□□ 1.02
PSMC4-204ENST00000596386 IL13P35225 146 aa21.4■■□□□ 1.02
PSMC4-204ENST00000596386 COL5A3P25940 1745 aaPredicted RBP21.39■■□□□ 1.01
PSMC4-204ENST00000596386 C1orf141Q5JVX7 400 aa21.39■■□□□ 1.01
PSMC4-204ENST00000596386 SULT6B1Q6IMI4 303 aa21.39■■□□□ 1.01
PSMC4-204ENST00000596386 SLC4A9Q96Q91 983 aa21.39■■□□□ 1.01
PSMC4-204ENST00000596386 CABP4P57796 275 aa21.38■■□□□ 1.01
PSMC4-204ENST00000596386 MTHFSP49914 203 aa21.37■■□□□ 1.01
PSMC4-204ENST00000596386 RBM42Q9BTD8 480 aaKnown RBP21.37■■□□□ 1.01
PSMC4-204ENST00000596386 RTCBQ9Y3I0 505 aaKnown RBP21.36■■□□□ 1.01
PSMC4-204ENST00000596386 CNTNAP4Q9C0A0 1308 aa21.35■■□□□ 1.01
PSMC4-204ENST00000596386 RC3H1Q5TC82 1133 aaKnown RBP21.35■■□□□ 1.01
PSMC4-204ENST00000596386 SCN11AQ9UI33 1791 aa21.33■■□□□ 1.01
PSMC4-204ENST00000596386 PER1O15534 1290 aaPredicted RBP21.33■■□□□ 1.01
PSMC4-204ENST00000596386 ADRA2BP18089 450 aa21.33■■□□□ 1.01
PSMC4-204ENST00000596386 TRAPPC3LQ5T215 181 aa21.33■■□□□ 1.01
PSMC4-204ENST00000596386 MMP10P09238 476 aa21.32■■□□□ 1
PSMC4-204ENST00000596386 NFATC2IPQ8NCF5 419 aa21.32■■□□□ 1
PSMC4-204ENST00000596386 CICQ96RK0 1608 aaPredicted RBP21.32■■□□□ 1
PSMC4-204ENST00000596386 MYH14Q7Z406 1995 aaKnown RBP21.32■■□□□ 1
PSMC4-204ENST00000596386 PTCD1O75127 700 aaKnown RBP21.3■■□□□ 1
PSMC4-204ENST00000596386 RPS6KA4O75676 772 aa21.3■■□□□ 1
PSMC4-204ENST00000596386 C1QTNF8P60827 252 aa21.3■■□□□ 1
PSMC4-204ENST00000596386 AKAP4Q5JQC9 854 aa21.3■■□□□ 1
PSMC4-204ENST00000596386 C4AP0C0L4 1744 aa21.29■■□□□ 1
PSMC4-204ENST00000596386 KIF13BQ9NQT8 1826 aa21.29■■□□□ 1
PSMC4-204ENST00000596386 MRC1P22897 1456 aa21.29■■□□□ 1
PSMC4-204ENST00000596386 NLGN1Q8N2Q7 840 aa21.29■■□□□ 1
PSMC4-204ENST00000596386 ARHGEF1Q92888 912 aaKnown RBP21.29■■□□□ 1
PSMC4-204ENST00000596386 TJP1Q07157 1748 aa21.29■■□□□ 1
PSMC4-204ENST00000596386 CC2D1BQ5T0F9 858 aaKnown RBP21.28■■□□□ 1
PSMC4-204ENST00000596386 NPC1L1Q9UHC9 1359 aa21.27■■□□□ 1
PSMC4-204ENST00000596386 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
PSMC4-204ENST00000596386 HMOX1P09601 288 aa21.27■■□□□ 1
PSMC4-204ENST00000596386 GYS1P13807 737 aa21.27■■□□□ 1
PSMC4-204ENST00000596386 RFC4P35249 363 aa21.27■■□□□ 1
PSMC4-204ENST00000596386 SLC52A2Q9HAB3 445 aa21.27■■□□□ 1
PSMC4-204ENST00000596386 WWC3Q9ULE0 1092 aa21.27■■□□□ 1
PSMC4-204ENST00000596386 C10orf71Q711Q0 1435 aa21.27■■□□□ 1
PSMC4-204ENST00000596386 PXDNLA1KZ92 1463 aa21.26■□□□□ 0.99
PSMC4-204ENST00000596386 CRKLP46109 303 aaKnown RBP21.26■□□□□ 0.99
PSMC4-204ENST00000596386 ATP10DQ9P241 1426 aa21.26■□□□□ 0.99
PSMC4-204ENST00000596386 KIAA1551Q9HCM1 1747 aa21.26■□□□□ 0.99
PSMC4-204ENST00000596386 ADCY9O60503 1353 aa21.25■□□□□ 0.99
PSMC4-204ENST00000596386 DIAPH1O60610 1272 aaKnown RBP21.25■□□□□ 0.99
PSMC4-204ENST00000596386 COL3A1P02461 1466 aaPredicted RBP21.25■□□□□ 0.99
PSMC4-204ENST00000596386 VIRMAQ69YN4 1812 aaKnown RBP21.25■□□□□ 0.99
PSMC4-204ENST00000596386 ADAMTS7Q9UKP4 1686 aa21.24■□□□□ 0.99
PSMC4-204ENST00000596386 LGR6Q9HBX8 967 aa21.24■□□□□ 0.99
PSMC4-204ENST00000596386 RNMTO43148 476 aaKnown RBP21.23■□□□□ 0.99
PSMC4-204ENST00000596386 TGFB2P61812 414 aa21.22■□□□□ 0.99
PSMC4-204ENST00000596386 MTHFSDQ2M296 383 aaKnown RBP21.22■□□□□ 0.99
PSMC4-204ENST00000596386 USP42Q9H9J4 1324 aaKnown RBP21.22■□□□□ 0.99
PSMC4-204ENST00000596386 N4BP2Q86UW6 1770 aaPredicted RBP21.21■□□□□ 0.99
PSMC4-204ENST00000596386 SENP3-EIF4A1A0A087X0R7 540 aa21.21■□□□□ 0.99
PSMC4-204ENST00000596386 CCDC87Q9NVE4 849 aa21.21■□□□□ 0.99
PSMC4-204ENST00000596386 KCPQ6ZWJ8 1503 aa21.2■□□□□ 0.98
PSMC4-204ENST00000596386 INTS5Q6P9B9 1019 aaKnown RBP21.2■□□□□ 0.98
PSMC4-204ENST00000596386 PARP3Q9Y6F1 533 aa21.2■□□□□ 0.98
PSMC4-204ENST00000596386 DNAJC10Q8IXB1 793 aa21.19■□□□□ 0.98
PSMC4-204ENST00000596386 SRP68Q9UHB9 627 aaKnown RBP21.19■□□□□ 0.98
PSMC4-204ENST00000596386 SLC39A6Q13433 755 aa21.18■□□□□ 0.98
PSMC4-204ENST00000596386 A0A0G2JLW4 131 aa21.17■□□□□ 0.98
PSMC4-204ENST00000596386 FKBP8Q14318 412 aa21.17■□□□□ 0.98
PSMC4-204ENST00000596386 GPBP1L1Q9HC44 474 aaPredicted RBP21.17■□□□□ 0.98
PSMC4-204ENST00000596386 BRCA1P38398 1863 aaKnown RBP21.17■□□□□ 0.98
PSMC4-204ENST00000596386 UBR2Q8IWV8 1755 aa21.16■□□□□ 0.98
PSMC4-204ENST00000596386 SOS1Q07889 1333 aaPredicted RBP21.16■□□□□ 0.98
PSMC4-204ENST00000596386 CNGB1Q14028 1251 aaPredicted RBP21.16■□□□□ 0.98
PSMC4-204ENST00000596386 CEP350Q5VT06 3117 aa21.15■□□□□ 0.98
PSMC4-204ENST00000596386 U2SURPO15042 1029 aaKnown RBP21.15■□□□□ 0.98
PSMC4-204ENST00000596386 CYP19A1P11511 503 aaPredicted RBP21.15■□□□□ 0.98
PSMC4-204ENST00000596386 DPEP1P16444 411 aa21.15■□□□□ 0.98
PSMC4-204ENST00000596386 DDR1Q08345 913 aa21.15■□□□□ 0.98
PSMC4-204ENST00000596386 BCS1LQ9Y276 419 aa21.15■□□□□ 0.98
PSMC4-204ENST00000596386 VSIG10Q8N0Z9 540 aa21.13■□□□□ 0.97
PSMC4-204ENST00000596386 COL15A1P39059 1388 aa21.12■□□□□ 0.97
PSMC4-204ENST00000596386 ZPR1O75312 459 aa21.12■□□□□ 0.97
PSMC4-204ENST00000596386 GAS2L2Q8NHY3 880 aa21.12■□□□□ 0.97
PSMC4-204ENST00000596386 ZNF526Q8TF50 670 aaPredicted RBP21.12■□□□□ 0.97
PSMC4-204ENST00000596386 POLRMTO00411 1230 aaKnown RBP21.11■□□□□ 0.97
PSMC4-204ENST00000596386 KCNA3P22001 575 aa21.11■□□□□ 0.97
PSMC4-204ENST00000596386 USPL1Q5W0Q7 1092 aa21.11■□□□□ 0.97
PSMC4-204ENST00000596386 ZBTB1Q9Y2K1 713 aa21.11■□□□□ 0.97
PSMC4-204ENST00000596386 ARFGEF1Q9Y6D6 1849 aa21.11■□□□□ 0.97
PSMC4-204ENST00000596386 GNAT3A8MTJ3 354 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms