RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.28■■□□□ 1.48
PNKP-206ENST00000595792 PLEKHO1Q53GL0 409 aaPredicted RBP24.28■■□□□ 1.48
PNKP-206ENST00000595792 CC2D1BQ5T0F9 858 aaKnown RBP24.28■■□□□ 1.48
PNKP-206ENST00000595792 SULT6B1Q6IMI4 303 aa24.28■■□□□ 1.48
PNKP-206ENST00000595792 KDRP35968 1356 aa24.28■■□□□ 1.48
PNKP-206ENST00000595792 IL13P35225 146 aa24.27■■□□□ 1.48
PNKP-206ENST00000595792 ATP6V1AP38606 617 aa24.27■■□□□ 1.48
PNKP-206ENST00000595792 FLAD1Q8NFF5 587 aa24.27■■□□□ 1.48
PNKP-206ENST00000595792 GNPATO15228 680 aa24.25■■□□□ 1.47
PNKP-206ENST00000595792 MTHFSP49914 203 aa24.25■■□□□ 1.47
PNKP-206ENST00000595792 DCAF5Q96JK2 942 aa24.25■■□□□ 1.47
PNKP-206ENST00000595792 SLC4A9Q96Q91 983 aa24.25■■□□□ 1.47
PNKP-206ENST00000595792 CNGB1Q14028 1251 aaPredicted RBP24.24■■□□□ 1.47
PNKP-206ENST00000595792 COL5A3P25940 1745 aaPredicted RBP24.24■■□□□ 1.47
PNKP-206ENST00000595792 ERVV-2B6SEH9 535 aa24.23■■□□□ 1.47
PNKP-206ENST00000595792 HSP90AB1P08238 724 aaKnown RBP24.23■■□□□ 1.47
PNKP-206ENST00000595792 AMOTQ4VCS5 1084 aa24.23■■□□□ 1.47
PNKP-206ENST00000595792 ZNF784Q8NCA9 323 aaPredicted RBP24.23■■□□□ 1.47
PNKP-206ENST00000595792 RBM42Q9BTD8 480 aaKnown RBP24.23■■□□□ 1.47
PNKP-206ENST00000595792 NPC1L1Q9UHC9 1359 aa24.23■■□□□ 1.47
PNKP-206ENST00000595792 SCN11AQ9UI33 1791 aa24.22■■□□□ 1.47
PNKP-206ENST00000595792 SSFA2P28290 1259 aa24.22■■□□□ 1.47
PNKP-206ENST00000595792 ZNF831Q5JPB2 1677 aa24.21■■□□□ 1.47
PNKP-206ENST00000595792 COL3A1P02461 1466 aaPredicted RBP24.21■■□□□ 1.47
PNKP-206ENST00000595792 YBX3P16989 372 aaKnown RBP eCLIP24.21■■□□□ 1.47
PNKP-206ENST00000595792 HMGB2P26583 209 aaKnown RBP24.21■■□□□ 1.47
PNKP-206ENST00000595792 CABP4P57796 275 aa24.21■■□□□ 1.47
PNKP-206ENST00000595792 C1orf141Q5JVX7 400 aa24.2■■□□□ 1.46
PNKP-206ENST00000595792 HMOX1P09601 288 aa24.19■■□□□ 1.46
PNKP-206ENST00000595792 TJP1Q07157 1748 aa24.17■■□□□ 1.46
PNKP-206ENST00000595792 NFATC2IPQ8NCF5 419 aa24.16■■□□□ 1.46
PNKP-206ENST00000595792 PTCD1O75127 700 aaKnown RBP24.15■■□□□ 1.46
PNKP-206ENST00000595792 WWC3Q9ULE0 1092 aa24.15■■□□□ 1.46
PNKP-206ENST00000595792 CD2APQ9Y5K6 639 aa24.15■■□□□ 1.46
PNKP-206ENST00000595792 C4AP0C0L4 1744 aa24.15■■□□□ 1.46
PNKP-206ENST00000595792 MYH14Q7Z406 1995 aaKnown RBP24.14■■□□□ 1.45
PNKP-206ENST00000595792 RTCBQ9Y3I0 505 aaKnown RBP24.13■■□□□ 1.45
PNKP-206ENST00000595792 CNTNAP4Q9C0A0 1308 aa24.11■■□□□ 1.45
PNKP-206ENST00000595792 CICQ96RK0 1608 aaPredicted RBP24.11■■□□□ 1.45
PNKP-206ENST00000595792 DIAPH1O60610 1272 aaKnown RBP24.11■■□□□ 1.45
PNKP-206ENST00000595792 AKAP4Q5JQC9 854 aa24.11■■□□□ 1.45
PNKP-206ENST00000595792 LGR6Q9HBX8 967 aa24.11■■□□□ 1.45
PNKP-206ENST00000595792 MRC1P22897 1456 aa24.11■■□□□ 1.45
PNKP-206ENST00000595792 MMP10P09238 476 aa24.1■■□□□ 1.45
PNKP-206ENST00000595792 ARHGEF1Q92888 912 aaKnown RBP24.1■■□□□ 1.45
PNKP-206ENST00000595792 ADAMTS7Q9UKP4 1686 aa24.1■■□□□ 1.45
PNKP-206ENST00000595792 TRAPPC3LQ5T215 181 aa24.09■■□□□ 1.45
PNKP-206ENST00000595792 KIAA1551Q9HCM1 1747 aa24.08■■□□□ 1.45
PNKP-206ENST00000595792 MTHFSDQ2M296 383 aaKnown RBP24.08■■□□□ 1.45
PNKP-206ENST00000595792 RC3H1Q5TC82 1133 aaKnown RBP24.08■■□□□ 1.45
PNKP-206ENST00000595792 GRIN3BO60391 1043 aa24.07■■□□□ 1.44
PNKP-206ENST00000595792 RPS6KA4O75676 772 aa24.07■■□□□ 1.44
PNKP-206ENST00000595792 CRKLP46109 303 aaKnown RBP24.07■■□□□ 1.44
PNKP-206ENST00000595792 SLC52A2Q9HAB3 445 aa24.07■■□□□ 1.44
PNKP-206ENST00000595792 RNMTO43148 476 aaKnown RBP24.06■■□□□ 1.44
PNKP-206ENST00000595792 KIF13BQ9NQT8 1826 aa24.05■■□□□ 1.44
PNKP-206ENST00000595792 KCPQ6ZWJ8 1503 aa24.05■■□□□ 1.44
PNKP-206ENST00000595792 U2SURPO15042 1029 aaKnown RBP24.05■■□□□ 1.44
PNKP-206ENST00000595792 GYS1P13807 737 aa24.05■■□□□ 1.44
PNKP-206ENST00000595792 SLC39A6Q13433 755 aa24.05■■□□□ 1.44
PNKP-206ENST00000595792 N4BP2Q86UW6 1770 aaPredicted RBP24.04■■□□□ 1.44
PNKP-206ENST00000595792 ADRA2BP18089 450 aa24.04■■□□□ 1.44
PNKP-206ENST00000595792 RFC4P35249 363 aa24.04■■□□□ 1.44
PNKP-206ENST00000595792 SRP68Q9UHB9 627 aaKnown RBP24.04■■□□□ 1.44
PNKP-206ENST00000595792 PXDNLA1KZ92 1463 aa24.03■■□□□ 1.44
PNKP-206ENST00000595792 DNAJC10Q8IXB1 793 aa24.03■■□□□ 1.44
PNKP-206ENST00000595792 PPP2R1AP30153 589 aa24.02■■□□□ 1.44
PNKP-206ENST00000595792 C10orf71Q711Q0 1435 aa24.01■■□□□ 1.43
PNKP-206ENST00000595792 SIPA1L3O60292 1781 aaPredicted RBP24.01■■□□□ 1.43
PNKP-206ENST00000595792 INTS5Q6P9B9 1019 aaKnown RBP24.01■■□□□ 1.43
PNKP-206ENST00000595792 NLGN1Q8N2Q7 840 aa24.01■■□□□ 1.43
PNKP-206ENST00000595792 UBR2Q8IWV8 1755 aa24■■□□□ 1.43
PNKP-206ENST00000595792 USP42Q9H9J4 1324 aaKnown RBP23.98■■□□□ 1.43
PNKP-206ENST00000595792 ATP10DQ9P241 1426 aa23.98■■□□□ 1.43
PNKP-206ENST00000595792 FKBP8Q14318 412 aa23.97■■□□□ 1.43
PNKP-206ENST00000595792 CCDC87Q9NVE4 849 aa23.96■■□□□ 1.43
PNKP-206ENST00000595792 A0A0G2JLW4 131 aa23.95■■□□□ 1.42
PNKP-206ENST00000595792 CYP19A1P11511 503 aaPredicted RBP23.95■■□□□ 1.42
PNKP-206ENST00000595792 PARP3Q9Y6F1 533 aa23.95■■□□□ 1.42
PNKP-206ENST00000595792 ADCY9O60503 1353 aa23.94■■□□□ 1.42
PNKP-206ENST00000595792 SOS1Q07889 1333 aaPredicted RBP23.94■■□□□ 1.42
PNKP-206ENST00000595792 GIGYF1O75420 1035 aaPredicted RBP23.94■■□□□ 1.42
PNKP-206ENST00000595792 C1QTNF8P60827 252 aa23.94■■□□□ 1.42
PNKP-206ENST00000595792 DDR1Q08345 913 aa23.94■■□□□ 1.42
PNKP-206ENST00000595792 DLG5Q8TDM6 1919 aa23.93■■□□□ 1.42
PNKP-206ENST00000595792 IL17REQ8NFR9 667 aa23.93■■□□□ 1.42
PNKP-206ENST00000595792 RSPH6AQ9H0K4 717 aa23.93■■□□□ 1.42
PNKP-206ENST00000595792 ZBTB1Q9Y2K1 713 aa23.93■■□□□ 1.42
PNKP-206ENST00000595792 BRCA1P38398 1863 aaKnown RBP23.93■■□□□ 1.42
PNKP-206ENST00000595792 DPEP1P16444 411 aa23.92■■□□□ 1.42
PNKP-206ENST00000595792 PRKAR2BP31323 418 aa23.92■■□□□ 1.42
PNKP-206ENST00000595792 PHACTR3Q96KR7 559 aa23.92■■□□□ 1.42
PNKP-206ENST00000595792 GNAT3A8MTJ3 354 aa23.91■■□□□ 1.42
PNKP-206ENST00000595792 TGFB2P61812 414 aa23.91■■□□□ 1.42
PNKP-206ENST00000595792 USPL1Q5W0Q7 1092 aa23.91■■□□□ 1.42
PNKP-206ENST00000595792 GAS2L2Q8NHY3 880 aa23.91■■□□□ 1.42
PNKP-206ENST00000595792 ZNF526Q8TF50 670 aaPredicted RBP23.91■■□□□ 1.42
PNKP-206ENST00000595792 CFAP53Q96M91 514 aa23.91■■□□□ 1.42
PNKP-206ENST00000595792 BCS1LQ9Y276 419 aa23.91■■□□□ 1.42
PNKP-206ENST00000595792 COL15A1P39059 1388 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms