RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 ATP6V1AP38606 617 aa34.31■■■■□ 3.08
ZNF558-203ENST00000595786 AKAP4Q5JQC9 854 aa34.29■■■■□ 3.08
ZNF558-203ENST00000595786 SSFA2P28290 1259 aa34.28■■■■□ 3.08
ZNF558-203ENST00000595786 LINC00116Q8NCU8 138 aa34.28■■■■□ 3.08
ZNF558-203ENST00000595786 ITPK1Q13572 414 aa34.27■■■■□ 3.08
ZNF558-203ENST00000595786 ZNF831Q5JPB2 1677 aa34.26■■■■□ 3.08
ZNF558-203ENST00000595786 HMOX1P09601 288 aa34.25■■■■□ 3.07
ZNF558-203ENST00000595786 UBR3Q6ZT12 1888 aa34.24■■■■□ 3.07
ZNF558-203ENST00000595786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.23■■■■□ 3.07
ZNF558-203ENST00000595786 NFATC2IPQ8NCF5 419 aa34.23■■■■□ 3.07
ZNF558-203ENST00000595786 RBM42Q9BTD8 480 aaKnown RBP34.22■■■■□ 3.07
ZNF558-203ENST00000595786 COL3A1P02461 1466 aaPredicted RBP34.21■■■■□ 3.07
ZNF558-203ENST00000595786 CNGB1Q14028 1251 aaPredicted RBP34.2■■■■□ 3.07
ZNF558-203ENST00000595786 RC3H1Q5TC82 1133 aaKnown RBP34.2■■■■□ 3.07
ZNF558-203ENST00000595786 AMIGO3Q86WK7 504 aa34.2■■■■□ 3.07
ZNF558-203ENST00000595786 SLC4A9Q96Q91 983 aa34.2■■■■□ 3.07
ZNF558-203ENST00000595786 SCN11AQ9UI33 1791 aa34.2■■■■□ 3.07
ZNF558-203ENST00000595786 YY1P25490 414 aa34.19■■■■□ 3.06
ZNF558-203ENST00000595786 GNPATO15228 680 aa34.18■■■■□ 3.06
ZNF558-203ENST00000595786 CFAP53Q96M91 514 aa34.18■■■■□ 3.06
ZNF558-203ENST00000595786 PHF14O94880 888 aa34.17■■■■□ 3.06
ZNF558-203ENST00000595786 MTHFSDQ2M296 383 aaKnown RBP34.17■■■■□ 3.06
ZNF558-203ENST00000595786 MSL1Q68DK7 614 aa34.17■■■■□ 3.06
ZNF558-203ENST00000595786 SLC52A2Q9HAB3 445 aa34.16■■■■□ 3.06
ZNF558-203ENST00000595786 KLHL34Q8N239 644 aa34.15■■■■□ 3.06
ZNF558-203ENST00000595786 CNTNAP4Q9C0A0 1308 aa34.14■■■■□ 3.06
ZNF558-203ENST00000595786 U2SURPO15042 1029 aaKnown RBP34.14■■■■□ 3.06
ZNF558-203ENST00000595786 RNMTO43148 476 aaKnown RBP34.14■■■■□ 3.06
ZNF558-203ENST00000595786 LGR6Q9HBX8 967 aa34.14■■■■□ 3.06
ZNF558-203ENST00000595786 RTCBQ9Y3I0 505 aaKnown RBP34.14■■■■□ 3.06
ZNF558-203ENST00000595786 ADRA2BP18089 450 aa34.12■■■■□ 3.05
ZNF558-203ENST00000595786 CD2APQ9Y5K6 639 aa34.12■■■■□ 3.05
ZNF558-203ENST00000595786 PTCD1O75127 700 aaKnown RBP34.11■■■■□ 3.05
ZNF558-203ENST00000595786 TRAPPC3LQ5T215 181 aa34.11■■■■□ 3.05
ZNF558-203ENST00000595786 RPS6KA4O75676 772 aa34.1■■■■□ 3.05
ZNF558-203ENST00000595786 PPP2R1AP30153 589 aa34.1■■■■□ 3.05
ZNF558-203ENST00000595786 SMIM5Q71RC9 77 aa34.1■■■■□ 3.05
ZNF558-203ENST00000595786 NUDCQ9Y266 331 aa34.1■■■■□ 3.05
ZNF558-203ENST00000595786 MRC1P22897 1456 aa34.09■■■■□ 3.05
ZNF558-203ENST00000595786 GAS2L2Q8NHY3 880 aa34.09■■■■□ 3.05
ZNF558-203ENST00000595786 COL5A3P25940 1745 aaPredicted RBP34.09■■■■□ 3.05
ZNF558-203ENST00000595786 GPR162Q16538 588 aa34.08■■■■□ 3.05
ZNF558-203ENST00000595786 ADAMTS7Q9UKP4 1686 aa34.07■■■■□ 3.04
ZNF558-203ENST00000595786 NLGN2Q8NFZ4 835 aa34.07■■■■□ 3.04
ZNF558-203ENST00000595786 CICQ96RK0 1608 aaPredicted RBP34.05■■■■□ 3.04
ZNF558-203ENST00000595786 NLGN1Q8N2Q7 840 aa34.04■■■■□ 3.04
ZNF558-203ENST00000595786 VIRMAQ69YN4 1812 aaKnown RBP34.03■■■■□ 3.04
ZNF558-203ENST00000595786 ARHGEF1Q92888 912 aaKnown RBP34.03■■■■□ 3.04
ZNF558-203ENST00000595786 MYH14Q7Z406 1995 aaKnown RBP34.02■■■■□ 3.04
ZNF558-203ENST00000595786 GNAT3A8MTJ3 354 aa34.02■■■■□ 3.04
ZNF558-203ENST00000595786 CHD4Q14839 1912 aa34.01■■■■□ 3.04
ZNF558-203ENST00000595786 CRKLP46109 303 aaKnown RBP34.01■■■■□ 3.03
ZNF558-203ENST00000595786 RSPH6AQ9H0K4 717 aa34.01■■■■□ 3.03
ZNF558-203ENST00000595786 RFC4P35249 363 aa34■■■■□ 3.03
ZNF558-203ENST00000595786 VSIG10Q8N0Z9 540 aa33.98■■■■□ 3.03
ZNF558-203ENST00000595786 GRIN3BO60391 1043 aa33.97■■■■□ 3.03
ZNF558-203ENST00000595786 FCHSD2O94868 740 aa33.97■■■■□ 3.03
ZNF558-203ENST00000595786 PRKAR2BP31323 418 aa33.97■■■■□ 3.03
ZNF558-203ENST00000595786 SLC39A6Q13433 755 aa33.97■■■■□ 3.03
ZNF558-203ENST00000595786 IL17REQ8NFR9 667 aa33.97■■■■□ 3.03
ZNF558-203ENST00000595786 TJP1Q07157 1748 aa33.96■■■■□ 3.03
ZNF558-203ENST00000595786 U2AF1L5P0DN76 240 aaPredicted RBP33.96■■■■□ 3.03
ZNF558-203ENST00000595786 U2AF1Q01081 240 aaKnown RBP eCLIP33.96■■■■□ 3.03
ZNF558-203ENST00000595786 MMP10P09238 476 aa33.95■■■■□ 3.03
ZNF558-203ENST00000595786 TEFQ10587 303 aa33.95■■■■□ 3.03
ZNF558-203ENST00000595786 DNAJC10Q8IXB1 793 aa33.95■■■■□ 3.03
ZNF558-203ENST00000595786 PELP1Q8IZL8 1130 aaKnown RBP33.95■■■■□ 3.03
ZNF558-203ENST00000595786 PHACTR3Q96KR7 559 aa33.95■■■■□ 3.03
ZNF558-203ENST00000595786 GYS1P13807 737 aa33.94■■■■□ 3.02
ZNF558-203ENST00000595786 INTS5Q6P9B9 1019 aaKnown RBP33.94■■■■□ 3.02
ZNF558-203ENST00000595786 UTRNP46939 3433 aa33.94■■■■□ 3.02
ZNF558-203ENST00000595786 CCDC87Q9NVE4 849 aa33.93■■■■□ 3.02
ZNF558-203ENST00000595786 CYP19A1P11511 503 aaPredicted RBP33.92■■■■□ 3.02
ZNF558-203ENST00000595786 KCPQ6ZWJ8 1503 aa33.92■■■■□ 3.02
ZNF558-203ENST00000595786 TTC5Q8N0Z6 440 aa33.91■■■■□ 3.02
ZNF558-203ENST00000595786 CEMIPQ8WUJ3 1361 aa33.9■■■■□ 3.02
ZNF558-203ENST00000595786 YBX3P16989 372 aaKnown RBP eCLIP33.89■■■■□ 3.02
ZNF558-203ENST00000595786 USP42Q9H9J4 1324 aaKnown RBP33.87■■■■□ 3.01
ZNF558-203ENST00000595786 ZNF790Q6PG37 636 aa33.87■■■■□ 3.01
ZNF558-203ENST00000595786 UBR2Q8IWV8 1755 aa33.87■■■■□ 3.01
ZNF558-203ENST00000595786 C4AP0C0L4 1744 aa33.87■■■■□ 3.01
ZNF558-203ENST00000595786 TEX13AQ9BXU3 409 aaPredicted RBP33.86■■■■□ 3.01
ZNF558-203ENST00000595786 SOS1Q07889 1333 aaPredicted RBP33.85■■■■□ 3.01
ZNF558-203ENST00000595786 PARP3Q9Y6F1 533 aa33.85■■■■□ 3.01
ZNF558-203ENST00000595786 HTATSF1O43719 755 aaKnown RBP33.84■■■■□ 3.01
ZNF558-203ENST00000595786 STARD3NLO95772 234 aa33.84■■■■□ 3.01
ZNF558-203ENST00000595786 TGFB2P61812 414 aa33.84■■■■□ 3.01
ZNF558-203ENST00000595786 SIPA1L3O60292 1781 aaPredicted RBP33.84■■■■□ 3.01
ZNF558-203ENST00000595786 ZNF784Q8NCA9 323 aaPredicted RBP33.83■■■■□ 3.01
ZNF558-203ENST00000595786 RTF1Q92541 710 aaKnown RBP33.82■■■■□ 3
ZNF558-203ENST00000595786 SRP68Q9UHB9 627 aaKnown RBP33.82■■■■□ 3
ZNF558-203ENST00000595786 ZPR1O75312 459 aa33.81■■■■□ 3
ZNF558-203ENST00000595786 RALBP1Q15311 655 aa33.81■■■■□ 3
ZNF558-203ENST00000595786 ZNF496Q96IT1 587 aaPredicted RBP33.81■■■■□ 3
ZNF558-203ENST00000595786 KIF13BQ9NQT8 1826 aa33.81■■■■□ 3
ZNF558-203ENST00000595786 GOLGB1Q14789 3259 aaKnown RBP33.8■■■■□ 3
ZNF558-203ENST00000595786 HEG1Q9ULI3 1381 aa33.8■■■■□ 3
ZNF558-203ENST00000595786 NEFMP07197 916 aa33.79■■■■□ 3
ZNF558-203ENST00000595786 FKBP8Q14318 412 aa33.79■■■■□ 3
ZNF558-203ENST00000595786 FMNL2Q96PY5 1086 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms