RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 CD163L1Q9NR16 1453 aa14.53□□□□□ -0.08
NOTCH3-203ENST00000595514 NBPF6Q5VWK0 638 aa14.53□□□□□ -0.08
NOTCH3-203ENST00000595514 NBPF4Q96M43 638 aa14.53□□□□□ -0.08
NOTCH3-203ENST00000595514 ZC3H4Q9UPT8 1303 aaKnown RBP14.52□□□□□ -0.08
NOTCH3-203ENST00000595514 FOXN1O15353 648 aa14.52□□□□□ -0.09
NOTCH3-203ENST00000595514 KCNA3P22001 575 aa14.52□□□□□ -0.09
NOTCH3-203ENST00000595514 PIGBQ92521 554 aa14.52□□□□□ -0.09
NOTCH3-203ENST00000595514 MKRN1Q9UHC7 482 aaKnown RBP14.52□□□□□ -0.09
NOTCH3-203ENST00000595514 PARP3Q9Y6F1 533 aa14.52□□□□□ -0.09
NOTCH3-203ENST00000595514 TRAPPC3LQ5T215 181 aa14.51□□□□□ -0.09
NOTCH3-203ENST00000595514 AIDAQ96BJ3 306 aa14.51□□□□□ -0.09
NOTCH3-203ENST00000595514 TERF2IPQ9NYB0 399 aa14.51□□□□□ -0.09
NOTCH3-203ENST00000595514 SMG6Q86US8 1419 aaKnown RBP14.5□□□□□ -0.09
NOTCH3-203ENST00000595514 ATP6V1AP38606 617 aa14.5□□□□□ -0.09
NOTCH3-203ENST00000595514 CTCFP49711 727 aaPredicted RBP14.5□□□□□ -0.09
NOTCH3-203ENST00000595514 ITPK1Q13572 414 aa14.5□□□□□ -0.09
NOTCH3-203ENST00000595514 COG3Q96JB2 828 aa14.5□□□□□ -0.09
NOTCH3-203ENST00000595514 SLC12A5Q9H2X9 1139 aa14.5□□□□□ -0.09
NOTCH3-203ENST00000595514 RTCBQ9Y3I0 505 aaKnown RBP14.5□□□□□ -0.09
NOTCH3-203ENST00000595514 GLTPD2A6NH11 291 aa14.49□□□□□ -0.09
NOTCH3-203ENST00000595514 CYP27B1O15528 508 aa14.49□□□□□ -0.09
NOTCH3-203ENST00000595514 CREBZFQ9NS37 354 aa14.49□□□□□ -0.09
NOTCH3-203ENST00000595514 RTL1A6NKG5 1358 aa14.48□□□□□ -0.09
NOTCH3-203ENST00000595514 ROCK2O75116 1388 aaKnown RBP14.48□□□□□ -0.09
NOTCH3-203ENST00000595514 FBLN1P23142 703 aa14.48□□□□□ -0.09
NOTCH3-203ENST00000595514 A0A1W2PP64 1363 aa14.47□□□□□ -0.09
NOTCH3-203ENST00000595514 GYS1P13807 737 aa14.47□□□□□ -0.09
NOTCH3-203ENST00000595514 ADRA2BP18089 450 aa14.47□□□□□ -0.09
NOTCH3-203ENST00000595514 ABHD8Q96I13 439 aa14.47□□□□□ -0.09
NOTCH3-203ENST00000595514 TMOD3Q9NYL9 352 aa14.47□□□□□ -0.09
NOTCH3-203ENST00000595514 ARFGEF1Q9Y6D6 1849 aa14.47□□□□□ -0.09
NOTCH3-203ENST00000595514 RGPD2P0DJD1 1756 aa14.47□□□□□ -0.09
NOTCH3-203ENST00000595514 C4AP0C0L4 1744 aa14.46□□□□□ -0.09
NOTCH3-203ENST00000595514 BRCA1P38398 1863 aaKnown RBP14.46□□□□□ -0.09
NOTCH3-203ENST00000595514 RFC4P35249 363 aa14.46□□□□□ -0.09
NOTCH3-203ENST00000595514 RASSF7Q02833 373 aa14.46□□□□□ -0.09
NOTCH3-203ENST00000595514 MLLT1Q03111 559 aaPredicted RBP14.46□□□□□ -0.09
NOTCH3-203ENST00000595514 L3MBTL2Q969R5 705 aa14.46□□□□□ -0.09
NOTCH3-203ENST00000595514 LMNB1P20700 586 aa14.45□□□□□ -0.1
NOTCH3-203ENST00000595514 ARHGEF1Q92888 912 aaKnown RBP14.45□□□□□ -0.1
NOTCH3-203ENST00000595514 ASAP1Q9ULH1 1129 aa14.45□□□□□ -0.1
NOTCH3-203ENST00000595514 MAP2P11137 1827 aaKnown RBP14.44□□□□□ -0.1
NOTCH3-203ENST00000595514 CHRNA5P30532 468 aa14.44□□□□□ -0.1
NOTCH3-203ENST00000595514 RRS1Q15050 365 aaKnown RBP14.44□□□□□ -0.1
NOTCH3-203ENST00000595514 SIN3AQ96ST3 1273 aa14.44□□□□□ -0.1
NOTCH3-203ENST00000595514 CLSPNQ9HAW4 1339 aa14.43□□□□□ -0.1
NOTCH3-203ENST00000595514 LBX1P52954 281 aa14.43□□□□□ -0.1
NOTCH3-203ENST00000595514 NKX1-1Q15270 411 aaPredicted RBP14.43□□□□□ -0.1
NOTCH3-203ENST00000595514 CNTNAP1P78357 1384 aa14.43□□□□□ -0.1
NOTCH3-203ENST00000595514 KDM6AO15550 1401 aaPredicted RBP14.42□□□□□ -0.1
NOTCH3-203ENST00000595514 ITGB4P16144 1822 aa14.42□□□□□ -0.1
NOTCH3-203ENST00000595514 CCDC85CA6NKD9 419 aa14.41□□□□□ -0.1
NOTCH3-203ENST00000595514 RC3H1Q5TC82 1133 aaKnown RBP14.41□□□□□ -0.1
NOTCH3-203ENST00000595514 CHADLQ6NUI6 762 aa14.41□□□□□ -0.1
NOTCH3-203ENST00000595514 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
NOTCH3-203ENST00000595514 ATG3Q9NT62 314 aa14.41□□□□□ -0.1
NOTCH3-203ENST00000595514 SPG7Q9UQ90 795 aa14.41□□□□□ -0.1
NOTCH3-203ENST00000595514 RPS6KA4O75676 772 aa14.4□□□□□ -0.1
NOTCH3-203ENST00000595514 HSP90AB2PQ58FF8 381 aa14.4□□□□□ -0.1
NOTCH3-203ENST00000595514 INSRP06213 1382 aa14.39□□□□□ -0.11
NOTCH3-203ENST00000595514 POTECB2RU33 542 aa14.39□□□□□ -0.11
NOTCH3-203ENST00000595514 WBP1LQ9NX94 342 aa14.39□□□□□ -0.11
NOTCH3-203ENST00000595514 SBF1O95248 1867 aa14.39□□□□□ -0.11
NOTCH3-203ENST00000595514 CNTNAP4Q9C0A0 1308 aa14.39□□□□□ -0.11
NOTCH3-203ENST00000595514 KDRP35968 1356 aa14.38□□□□□ -0.11
NOTCH3-203ENST00000595514 VEGFBP49765 207 aa14.38□□□□□ -0.11
NOTCH3-203ENST00000595514 RGS19P49795 217 aa14.38□□□□□ -0.11
NOTCH3-203ENST00000595514 DDR1Q08345 913 aa14.38□□□□□ -0.11
NOTCH3-203ENST00000595514 FKBP8Q14318 412 aa14.38□□□□□ -0.11
NOTCH3-203ENST00000595514 RBM42Q9BTD8 480 aaKnown RBP14.38□□□□□ -0.11
NOTCH3-203ENST00000595514 HSPA8P11142 646 aaKnown RBP14.37□□□□□ -0.11
NOTCH3-203ENST00000595514 NEUROD1Q13562 356 aa14.37□□□□□ -0.11
NOTCH3-203ENST00000595514 PUS7Q96PZ0 661 aaKnown RBP14.36□□□□□ -0.11
NOTCH3-203ENST00000595514 SLC4A9Q96Q91 983 aa14.36□□□□□ -0.11
NOTCH3-203ENST00000595514 FLT4P35916 1363 aa14.35□□□□□ -0.11
NOTCH3-203ENST00000595514 IFNL2Q8IZJ0 200 aa14.35□□□□□ -0.11
NOTCH3-203ENST00000595514 SRP68Q9UHB9 627 aaKnown RBP14.35□□□□□ -0.11
NOTCH3-203ENST00000595514 TMEM88BA6NKF7 163 aa14.34□□□□□ -0.11
NOTCH3-203ENST00000595514 PHKG2P15735 406 aa14.34□□□□□ -0.11
NOTCH3-203ENST00000595514 TTLL6Q8N841 843 aa14.34□□□□□ -0.11
NOTCH3-203ENST00000595514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
NOTCH3-203ENST00000595514 USP42Q9H9J4 1324 aaKnown RBP14.34□□□□□ -0.11
NOTCH3-203ENST00000595514 NFKBIEO00221 500 aa14.33□□□□□ -0.12
NOTCH3-203ENST00000595514 POLRMTO00411 1230 aaKnown RBP14.33□□□□□ -0.12
NOTCH3-203ENST00000595514 POTEIP0CG38 1075 aa14.33□□□□□ -0.12
NOTCH3-203ENST00000595514 POTEJP0CG39 1038 aa14.33□□□□□ -0.12
NOTCH3-203ENST00000595514 ERFEQ4G0M1 354 aa14.33□□□□□ -0.12
NOTCH3-203ENST00000595514 GGNBP2Q9H3C7 697 aa14.33□□□□□ -0.12
NOTCH3-203ENST00000595514 PASKQ96RG2 1323 aa14.33□□□□□ -0.12
NOTCH3-203ENST00000595514 KIF24Q5T7B8 1368 aa14.33□□□□□ -0.12
NOTCH3-203ENST00000595514 MAP2K1Q02750 393 aaPredicted RBP14.32□□□□□ -0.12
NOTCH3-203ENST00000595514 CFAP44Q96MT7 982 aa14.32□□□□□ -0.12
NOTCH3-203ENST00000595514 CARD11Q9BXL7 1154 aa14.32□□□□□ -0.12
NOTCH3-203ENST00000595514 TIAM2Q8IVF5 1701 aa14.32□□□□□ -0.12
NOTCH3-203ENST00000595514 TM4SF1P30408 202 aa14.31□□□□□ -0.12
NOTCH3-203ENST00000595514 LDHDQ86WU2 507 aa14.31□□□□□ -0.12
NOTCH3-203ENST00000595514 TONSLQ96HA7 1378 aa14.31□□□□□ -0.12
NOTCH3-203ENST00000595514 FYB1O15117 783 aa14.3□□□□□ -0.12
NOTCH3-203ENST00000595514 CRKLP46109 303 aaKnown RBP14.3□□□□□ -0.12
NOTCH3-203ENST00000595514 IQCA1LA6NCM1 817 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms