RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 PANK2Q9BZ23 570 aa19.21■□□□□ 0.67
PNKP-204ENST00000594661 RWDD1Q9H446 243 aaPredicted RBP19.2■□□□□ 0.66
PNKP-204ENST00000594661 SLAIN2Q9P270 581 aa19.19■□□□□ 0.66
PNKP-204ENST00000594661 ERBB3P21860 1342 aa19.19■□□□□ 0.66
PNKP-204ENST00000594661 COL18A1P39060 1754 aa19.18■□□□□ 0.66
PNKP-204ENST00000594661 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
PNKP-204ENST00000594661 MRE11P49959 708 aa19.17■□□□□ 0.66
PNKP-204ENST00000594661 ANTXR1Q9H6X2 564 aa19.17■□□□□ 0.66
PNKP-204ENST00000594661 ABCC4O15439 1325 aa19.17■□□□□ 0.66
PNKP-204ENST00000594661 HAP1P54257 671 aaPredicted RBP19.16■□□□□ 0.66
PNKP-204ENST00000594661 ZBTB40Q9NUA8 1239 aa19.16■□□□□ 0.66
PNKP-204ENST00000594661 CEMIPQ8WUJ3 1361 aa19.16■□□□□ 0.66
PNKP-204ENST00000594661 ERBB4Q15303 1308 aa19.16■□□□□ 0.66
PNKP-204ENST00000594661 BECN1Q14457 450 aa19.15■□□□□ 0.66
PNKP-204ENST00000594661 ZNF530Q6P9A1 599 aaPredicted RBP19.15■□□□□ 0.66
PNKP-204ENST00000594661 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
PNKP-204ENST00000594661 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
PNKP-204ENST00000594661 TAF7Q15545 349 aaPredicted RBP19.14■□□□□ 0.65
PNKP-204ENST00000594661 CHRNA2Q15822 529 aa19.14■□□□□ 0.65
PNKP-204ENST00000594661 LGR6Q9HBX8 967 aa19.14■□□□□ 0.65
PNKP-204ENST00000594661 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
PNKP-204ENST00000594661 API5Q9BZZ5 524 aaKnown RBP19.13■□□□□ 0.65
PNKP-204ENST00000594661 SOS2Q07890 1332 aaPredicted RBP19.13■□□□□ 0.65
PNKP-204ENST00000594661 RGS12O14924 1447 aa19.13■□□□□ 0.65
PNKP-204ENST00000594661 AMOTQ4VCS5 1084 aa19.13■□□□□ 0.65
PNKP-204ENST00000594661 AKAP4Q5JQC9 854 aa19.13■□□□□ 0.65
PNKP-204ENST00000594661 MAP7D2Q96T17 732 aa19.13■□□□□ 0.65
PNKP-204ENST00000594661 ISY1Q9ULR0 285 aaKnown RBP19.13■□□□□ 0.65
PNKP-204ENST00000594661 FAM208AQ9UK61 1670 aaKnown RBP19.12■□□□□ 0.65
PNKP-204ENST00000594661 BABAM1Q9NWV8 329 aa19.12■□□□□ 0.65
PNKP-204ENST00000594661 ABCC6O95255 1503 aa19.11■□□□□ 0.65
PNKP-204ENST00000594661 CPDO75976 1380 aa19.11■□□□□ 0.65
PNKP-204ENST00000594661 ZBTB7BO15156 539 aaPredicted RBP19.11■□□□□ 0.65
PNKP-204ENST00000594661 NLRP2Q9NX02 1062 aa19.11■□□□□ 0.65
PNKP-204ENST00000594661 TERF1P54274 439 aa19.1■□□□□ 0.65
PNKP-204ENST00000594661 MPRIPQ6WCQ1 1025 aa19.1■□□□□ 0.65
PNKP-204ENST00000594661 SMAP1Q8IYB5 467 aaPredicted RBP19.1■□□□□ 0.65
PNKP-204ENST00000594661 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
PNKP-204ENST00000594661 HDAC1Q13547 482 aaPredicted RBP19.1■□□□□ 0.65
PNKP-204ENST00000594661 C1orf141Q5JVX7 400 aa19.09■□□□□ 0.65
PNKP-204ENST00000594661 KDM3BQ7LBC6 1761 aa19.08■□□□□ 0.65
PNKP-204ENST00000594661 NHSL1Q5SYE7 1610 aa19.08■□□□□ 0.64
PNKP-204ENST00000594661 PTPRCP08575 1304 aa19.08■□□□□ 0.64
PNKP-204ENST00000594661 CSB-PGBD3P0DP91 1061 aa19.07■□□□□ 0.64
PNKP-204ENST00000594661 G2E3Q7L622 706 aa19.07■□□□□ 0.64
PNKP-204ENST00000594661 RNMTO43148 476 aaKnown RBP19.07■□□□□ 0.64
PNKP-204ENST00000594661 C1orf115Q9H7X2 142 aa19.07■□□□□ 0.64
PNKP-204ENST00000594661 MEGF6O75095 1541 aa19.07■□□□□ 0.64
PNKP-204ENST00000594661 ABCA3Q99758 1704 aa19.07■□□□□ 0.64
PNKP-204ENST00000594661 KIAA1211Q6ZU35 1233 aa19.06■□□□□ 0.64
PNKP-204ENST00000594661 GRPEL1Q9HAV7 217 aa19.06■□□□□ 0.64
PNKP-204ENST00000594661 MCM4P33991 863 aa19.06■□□□□ 0.64
PNKP-204ENST00000594661 TEFQ10587 303 aa19.06■□□□□ 0.64
PNKP-204ENST00000594661 INTS3Q68E01 1043 aaKnown RBP19.06■□□□□ 0.64
PNKP-204ENST00000594661 RAPGEF4Q8WZA2 1011 aa19.06■□□□□ 0.64
PNKP-204ENST00000594661 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
PNKP-204ENST00000594661 SLKQ9H2G2 1235 aaPredicted RBP19.06■□□□□ 0.64
PNKP-204ENST00000594661 OVOS2A0A0G2JMS6 1433 aa19.05■□□□□ 0.64
PNKP-204ENST00000594661 ARXQ96QS3 562 aa19.05■□□□□ 0.64
PNKP-204ENST00000594661 CHMP4BQ9H444 224 aaKnown RBP19.05■□□□□ 0.64
PNKP-204ENST00000594661 KCNQ3O43525 872 aa19.04■□□□□ 0.64
PNKP-204ENST00000594661 SOS1Q07889 1333 aaPredicted RBP19.04■□□□□ 0.64
PNKP-204ENST00000594661 ADAMTS7Q9UKP4 1686 aa19.04■□□□□ 0.64
PNKP-204ENST00000594661 CCDC30Q5VVM6 783 aa19.04■□□□□ 0.64
PNKP-204ENST00000594661 STK31Q9BXU1 1019 aa19.04■□□□□ 0.64
PNKP-204ENST00000594661 EIF4A1P60842 406 aaKnown RBP19.03■□□□□ 0.64
PNKP-204ENST00000594661 PRDM11Q9NQV5 511 aa19.03■□□□□ 0.64
PNKP-204ENST00000594661 BTBD11A6QL63 1104 aa19.03■□□□□ 0.64
PNKP-204ENST00000594661 TATP17735 454 aaPredicted RBP19.03■□□□□ 0.64
PNKP-204ENST00000594661 SMC5Q8IY18 1101 aa19.02■□□□□ 0.64
PNKP-204ENST00000594661 SIPA1L3O60292 1781 aaPredicted RBP19.02■□□□□ 0.64
PNKP-204ENST00000594661 TRIM44Q96DX7 344 aaPredicted RBP19.01■□□□□ 0.63
PNKP-204ENST00000594661 F6X3S4 739 aa19.01■□□□□ 0.63
PNKP-204ENST00000594661 OFD1O75665 1012 aa19■□□□□ 0.63
PNKP-204ENST00000594661 SEC24BO95487 1268 aa19■□□□□ 0.63
PNKP-204ENST00000594661 FLIIQ13045 1269 aa19■□□□□ 0.63
PNKP-204ENST00000594661 HDGFL1Q5TGJ6 251 aa19■□□□□ 0.63
PNKP-204ENST00000594661 SIRT2Q8IXJ6 389 aa19■□□□□ 0.63
PNKP-204ENST00000594661 KDM6AO15550 1401 aaPredicted RBP19■□□□□ 0.63
PNKP-204ENST00000594661 TRAK2O60296 914 aa18.99■□□□□ 0.63
PNKP-204ENST00000594661 PHKG2P15735 406 aa18.99■□□□□ 0.63
PNKP-204ENST00000594661 SPG7Q9UQ90 795 aa18.99■□□□□ 0.63
PNKP-204ENST00000594661 PKD1L3Q7Z443 1732 aa18.99■□□□□ 0.63
PNKP-204ENST00000594661 COL5A2P05997 1499 aaPredicted RBP18.99■□□□□ 0.63
PNKP-204ENST00000594661 UTP14CQ5TAP6 766 aaKnown RBP18.98■□□□□ 0.63
PNKP-204ENST00000594661 GZF1Q9H116 711 aaPredicted RBP18.98■□□□□ 0.63
PNKP-204ENST00000594661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.98■□□□□ 0.63
PNKP-204ENST00000594661 CACNA1FO60840 1977 aa18.98■□□□□ 0.63
PNKP-204ENST00000594661 SCN11AQ9UI33 1791 aa18.98■□□□□ 0.63
PNKP-204ENST00000594661 SLC4A10Q6U841 1118 aa18.98■□□□□ 0.63
PNKP-204ENST00000594661 WDR17Q8IZU2 1322 aa18.98■□□□□ 0.63
PNKP-204ENST00000594661 PDIA4P13667 645 aaKnown RBP18.97■□□□□ 0.63
PNKP-204ENST00000594661 HOXB7P09629 217 aa18.97■□□□□ 0.63
PNKP-204ENST00000594661 EIF2S2P20042 333 aaKnown RBP18.97■□□□□ 0.63
PNKP-204ENST00000594661 FKBP5Q13451 457 aaPredicted RBP18.97■□□□□ 0.63
PNKP-204ENST00000594661 MEIS3Q99687 375 aa18.97■□□□□ 0.63
PNKP-204ENST00000594661 ROBO1Q9Y6N7 1651 aa18.96■□□□□ 0.63
PNKP-204ENST00000594661 ATP10DQ9P241 1426 aa18.96■□□□□ 0.63
PNKP-204ENST00000594661 PLEKHG2Q9H7P9 1386 aa18.96■□□□□ 0.63
PNKP-204ENST00000594661 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms