RNA–Protein interactions for RNA: ENST00000594417.1

ARHGEF1-208, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-208ENST00000594417 DIAPH1O60610 1272 aaKnown RBP18.79■□□□□ 0.6
ARHGEF1-208ENST00000594417 SSFA2P28290 1259 aa18.79■□□□□ 0.6
ARHGEF1-208ENST00000594417 LY75O60449 1722 aa18.78■□□□□ 0.6
ARHGEF1-208ENST00000594417 PKD1L3Q7Z443 1732 aa18.78■□□□□ 0.6
ARHGEF1-208ENST00000594417 HMOX1P09601 288 aa18.78■□□□□ 0.6
ARHGEF1-208ENST00000594417 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
ARHGEF1-208ENST00000594417 NFATC2IPQ8NCF5 419 aa18.77■□□□□ 0.6
ARHGEF1-208ENST00000594417 NLGN2Q8NFZ4 835 aa18.77■□□□□ 0.6
ARHGEF1-208ENST00000594417 PTCD1O75127 700 aaKnown RBP18.76■□□□□ 0.59
ARHGEF1-208ENST00000594417 TRAPPC3LQ5T215 181 aa18.76■□□□□ 0.59
ARHGEF1-208ENST00000594417 RTCBQ9Y3I0 505 aaKnown RBP18.76■□□□□ 0.59
ARHGEF1-208ENST00000594417 AKAP4Q5JQC9 854 aa18.75■□□□□ 0.59
ARHGEF1-208ENST00000594417 KDRP35968 1356 aa18.75■□□□□ 0.59
ARHGEF1-208ENST00000594417 CD2APQ9Y5K6 639 aa18.74■□□□□ 0.59
ARHGEF1-208ENST00000594417 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
ARHGEF1-208ENST00000594417 SLC4A9Q96Q91 983 aa18.73■□□□□ 0.59
ARHGEF1-208ENST00000594417 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
ARHGEF1-208ENST00000594417 KDM6AO15550 1401 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF1-208ENST00000594417 RC3H1Q5TC82 1133 aaKnown RBP18.72■□□□□ 0.59
ARHGEF1-208ENST00000594417 NPC1L1Q9UHC9 1359 aa18.71■□□□□ 0.59
ARHGEF1-208ENST00000594417 GRIN3BO60391 1043 aa18.71■□□□□ 0.59
ARHGEF1-208ENST00000594417 LGR6Q9HBX8 967 aa18.71■□□□□ 0.59
ARHGEF1-208ENST00000594417 C4BP0C0L5 1744 aa18.7■□□□□ 0.58
ARHGEF1-208ENST00000594417 RFC4P35249 363 aa18.7■□□□□ 0.58
ARHGEF1-208ENST00000594417 QSER1Q2KHR3 1735 aa18.7■□□□□ 0.58
ARHGEF1-208ENST00000594417 MTHFSDQ2M296 383 aaKnown RBP18.7■□□□□ 0.58
ARHGEF1-208ENST00000594417 CFAP53Q96M91 514 aa18.7■□□□□ 0.58
ARHGEF1-208ENST00000594417 C5P01031 1676 aa18.69■□□□□ 0.58
ARHGEF1-208ENST00000594417 RNMTO43148 476 aaKnown RBP18.69■□□□□ 0.58
ARHGEF1-208ENST00000594417 RPS6KA4O75676 772 aa18.69■□□□□ 0.58
ARHGEF1-208ENST00000594417 ADRA2BP18089 450 aa18.69■□□□□ 0.58
ARHGEF1-208ENST00000594417 NLGN1Q8N2Q7 840 aa18.69■□□□□ 0.58
ARHGEF1-208ENST00000594417 ZNF784Q8NCA9 323 aaPredicted RBP18.69■□□□□ 0.58
ARHGEF1-208ENST00000594417 ARHGEF1Q92888 912 aaKnown RBP18.69■□□□□ 0.58
ARHGEF1-208ENST00000594417 SLC52A2Q9HAB3 445 aa18.69■□□□□ 0.58
ARHGEF1-208ENST00000594417 CNTNAP4Q9C0A0 1308 aa18.68■□□□□ 0.58
ARHGEF1-208ENST00000594417 ITGB4P16144 1822 aa18.67■□□□□ 0.58
ARHGEF1-208ENST00000594417 MMP10P09238 476 aa18.67■□□□□ 0.58
ARHGEF1-208ENST00000594417 YBX3P16989 372 aaKnown RBP eCLIP18.66■□□□□ 0.58
ARHGEF1-208ENST00000594417 CRKLP46109 303 aaKnown RBP18.66■□□□□ 0.58
ARHGEF1-208ENST00000594417 NUDCQ9Y266 331 aa18.65■□□□□ 0.58
ARHGEF1-208ENST00000594417 SLC39A6Q13433 755 aa18.64■□□□□ 0.57
ARHGEF1-208ENST00000594417 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
ARHGEF1-208ENST00000594417 TUBGCP6Q96RT7 1819 aa18.64■□□□□ 0.57
ARHGEF1-208ENST00000594417 PARP3Q9Y6F1 533 aa18.63■□□□□ 0.57
ARHGEF1-208ENST00000594417 GYS1P13807 737 aa18.62■□□□□ 0.57
ARHGEF1-208ENST00000594417 TEFQ10587 303 aa18.62■□□□□ 0.57
ARHGEF1-208ENST00000594417 DNAJC10Q8IXB1 793 aa18.62■□□□□ 0.57
ARHGEF1-208ENST00000594417 WWC3Q9ULE0 1092 aa18.62■□□□□ 0.57
ARHGEF1-208ENST00000594417 GNAT3A8MTJ3 354 aa18.61■□□□□ 0.57
ARHGEF1-208ENST00000594417 TTC5Q8N0Z6 440 aa18.61■□□□□ 0.57
ARHGEF1-208ENST00000594417 CCDC87Q9NVE4 849 aa18.61■□□□□ 0.57
ARHGEF1-208ENST00000594417 U2AF1L5P0DN76 240 aaPredicted RBP18.6■□□□□ 0.57
ARHGEF1-208ENST00000594417 PPP2R1AP30153 589 aa18.6■□□□□ 0.57
ARHGEF1-208ENST00000594417 U2AF1Q01081 240 aaKnown RBP eCLIP18.6■□□□□ 0.57
ARHGEF1-208ENST00000594417 INTS5Q6P9B9 1019 aaKnown RBP18.6■□□□□ 0.57
ARHGEF1-208ENST00000594417 TAF1LQ8IZX4 1826 aa18.6■□□□□ 0.57
ARHGEF1-208ENST00000594417 COL24A1Q17RW2 1714 aa18.6■□□□□ 0.57
ARHGEF1-208ENST00000594417 ZPR1O75312 459 aa18.59■□□□□ 0.57
ARHGEF1-208ENST00000594417 PRKAR2BP31323 418 aa18.59■□□□□ 0.57
ARHGEF1-208ENST00000594417 SRP68Q9UHB9 627 aaKnown RBP18.59■□□□□ 0.57
ARHGEF1-208ENST00000594417 TGFB2P61812 414 aa18.58■□□□□ 0.56
ARHGEF1-208ENST00000594417 IL17REQ8NFR9 667 aa18.58■□□□□ 0.56
ARHGEF1-208ENST00000594417 CYP19A1P11511 503 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF1-208ENST00000594417 VSIG10Q8N0Z9 540 aa18.57■□□□□ 0.56
ARHGEF1-208ENST00000594417 A0A0G2JLW4 131 aa18.56■□□□□ 0.56
ARHGEF1-208ENST00000594417 STARD3NLO95772 234 aa18.56■□□□□ 0.56
ARHGEF1-208ENST00000594417 FKBP8Q14318 412 aa18.56■□□□□ 0.56
ARHGEF1-208ENST00000594417 PHACTR3Q96KR7 559 aa18.56■□□□□ 0.56
ARHGEF1-208ENST00000594417 USP42Q9H9J4 1324 aaKnown RBP18.55■□□□□ 0.56
ARHGEF1-208ENST00000594417 UBR3Q6ZT12 1888 aa18.55■□□□□ 0.56
ARHGEF1-208ENST00000594417 COL3A1P02461 1466 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF1-208ENST00000594417 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
ARHGEF1-208ENST00000594417 RSPH6AQ9H0K4 717 aa18.55■□□□□ 0.56
ARHGEF1-208ENST00000594417 FCHSD2O94868 740 aa18.54■□□□□ 0.56
ARHGEF1-208ENST00000594417 CANXP27824 592 aaKnown RBP18.54■□□□□ 0.56
ARHGEF1-208ENST00000594417 USPL1Q5W0Q7 1092 aa18.54■□□□□ 0.56
ARHGEF1-208ENST00000594417 ZNF790Q6PG37 636 aa18.53■□□□□ 0.56
ARHGEF1-208ENST00000594417 TEX13AQ9BXU3 409 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF1-208ENST00000594417 BCS1LQ9Y276 419 aa18.53■□□□□ 0.56
ARHGEF1-208ENST00000594417 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.56
ARHGEF1-208ENST00000594417 NEFMP07197 916 aa18.52■□□□□ 0.56
ARHGEF1-208ENST00000594417 DPEP1P16444 411 aa18.52■□□□□ 0.56
ARHGEF1-208ENST00000594417 ZNF496Q96IT1 587 aaPredicted RBP18.52■□□□□ 0.56
ARHGEF1-208ENST00000594417 ZBTB1Q9Y2K1 713 aa18.52■□□□□ 0.56
ARHGEF1-208ENST00000594417 UTRNP46939 3433 aa18.52■□□□□ 0.55
ARHGEF1-208ENST00000594417 BTBD11A6QL63 1104 aa18.51■□□□□ 0.55
ARHGEF1-208ENST00000594417 GIGYF1O75420 1035 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF1-208ENST00000594417 NPM2Q86SE8 214 aaKnown RBP18.51■□□□□ 0.55
ARHGEF1-208ENST00000594417 FMNL2Q96PY5 1086 aa18.51■□□□□ 0.55
ARHGEF1-208ENST00000594417 NARFQ9UHQ1 456 aa18.51■□□□□ 0.55
ARHGEF1-208ENST00000594417 ZNF831Q5JPB2 1677 aa18.5■□□□□ 0.55
ARHGEF1-208ENST00000594417 A0A087WZG4 1122 aa18.5■□□□□ 0.55
ARHGEF1-208ENST00000594417 MRC1P22897 1456 aa18.5■□□□□ 0.55
ARHGEF1-208ENST00000594417 TM4SF1P30408 202 aa18.49■□□□□ 0.55
ARHGEF1-208ENST00000594417 C1QTNF8P60827 252 aa18.49■□□□□ 0.55
ARHGEF1-208ENST00000594417 DDR1Q08345 913 aa18.49■□□□□ 0.55
ARHGEF1-208ENST00000594417 ARHGAP27Q6ZUM4 889 aa18.49■□□□□ 0.55
ARHGEF1-208ENST00000594417 ZNF330Q9Y3S2 320 aaPredicted RBP18.49■□□□□ 0.55
ARHGEF1-208ENST00000594417 MCM10Q7L590 875 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms