RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 PLEKHG2Q9H7P9 1386 aa20.27■□□□□ 0.84
PNKP-202ENST00000593706 GNPATO15228 680 aa20.27■□□□□ 0.84
PNKP-202ENST00000593706 SMIM5Q71RC9 77 aa20.27■□□□□ 0.84
PNKP-202ENST00000593706 ASAP1Q9ULH1 1129 aa20.27■□□□□ 0.84
PNKP-202ENST00000593706 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.83
PNKP-202ENST00000593706 ATP10DQ9P241 1426 aa20.27■□□□□ 0.83
PNKP-202ENST00000593706 SCN11AQ9UI33 1791 aa20.26■□□□□ 0.83
PNKP-202ENST00000593706 ATP6V1AP38606 617 aa20.26■□□□□ 0.83
PNKP-202ENST00000593706 MYH14Q7Z406 1995 aaKnown RBP20.26■□□□□ 0.83
PNKP-202ENST00000593706 IGSF1Q8N6C5 1336 aa20.26■□□□□ 0.83
PNKP-202ENST00000593706 BRCA1P38398 1863 aaKnown RBP20.24■□□□□ 0.83
PNKP-202ENST00000593706 CICQ96RK0 1608 aaPredicted RBP20.24■□□□□ 0.83
PNKP-202ENST00000593706 ITPK1Q13572 414 aa20.24■□□□□ 0.83
PNKP-202ENST00000593706 WWC3Q9ULE0 1092 aa20.24■□□□□ 0.83
PNKP-202ENST00000593706 KDRP35968 1356 aa20.23■□□□□ 0.83
PNKP-202ENST00000593706 EIF4G2P78344 907 aaKnown RBP eCLIP20.22■□□□□ 0.83
PNKP-202ENST00000593706 ATG3Q9NT62 314 aa20.22■□□□□ 0.83
PNKP-202ENST00000593706 TJP1Q07157 1748 aa20.21■□□□□ 0.83
PNKP-202ENST00000593706 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
PNKP-202ENST00000593706 RBM42Q9BTD8 480 aaKnown RBP20.2■□□□□ 0.82
PNKP-202ENST00000593706 GPBP1L1Q9HC44 474 aaPredicted RBP20.2■□□□□ 0.82
PNKP-202ENST00000593706 ADCY9O60503 1353 aa20.2■□□□□ 0.82
PNKP-202ENST00000593706 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
PNKP-202ENST00000593706 ARFGEF1Q9Y6D6 1849 aa20.19■□□□□ 0.82
PNKP-202ENST00000593706 ERVV-2B6SEH9 535 aa20.19■□□□□ 0.82
PNKP-202ENST00000593706 HSPA5P11021 654 aaKnown RBP20.19■□□□□ 0.82
PNKP-202ENST00000593706 DCAF5Q96JK2 942 aa20.19■□□□□ 0.82
PNKP-202ENST00000593706 PANK3Q9H999 370 aa20.19■□□□□ 0.82
PNKP-202ENST00000593706 PLEKHO1Q53GL0 409 aaPredicted RBP20.18■□□□□ 0.82
PNKP-202ENST00000593706 ZNF530Q6P9A1 599 aaPredicted RBP20.18■□□□□ 0.82
PNKP-202ENST00000593706 ZNF526Q8TF50 670 aaPredicted RBP20.18■□□□□ 0.82
PNKP-202ENST00000593706 RTCBQ9Y3I0 505 aaKnown RBP20.18■□□□□ 0.82
PNKP-202ENST00000593706 MMP10P09238 476 aa20.17■□□□□ 0.82
PNKP-202ENST00000593706 PXDNLA1KZ92 1463 aa20.17■□□□□ 0.82
PNKP-202ENST00000593706 CABP4P57796 275 aa20.16■□□□□ 0.82
PNKP-202ENST00000593706 TRAPPC3LQ5T215 181 aa20.16■□□□□ 0.82
PNKP-202ENST00000593706 MORC1Q86VD1 984 aa20.16■□□□□ 0.82
PNKP-202ENST00000593706 C1orf141Q5JVX7 400 aa20.15■□□□□ 0.82
PNKP-202ENST00000593706 CNTNAP4Q9C0A0 1308 aa20.14■□□□□ 0.81
PNKP-202ENST00000593706 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
PNKP-202ENST00000593706 C10orf71Q711Q0 1435 aa20.13■□□□□ 0.81
PNKP-202ENST00000593706 ADRA2BP18089 450 aa20.13■□□□□ 0.81
PNKP-202ENST00000593706 AEBP1Q8IUX7 1158 aa20.13■□□□□ 0.81
PNKP-202ENST00000593706 SLC4A9Q96Q91 983 aa20.13■□□□□ 0.81
PNKP-202ENST00000593706 RFC4P35249 363 aa20.12■□□□□ 0.81
PNKP-202ENST00000593706 MTHFSP49914 203 aa20.12■□□□□ 0.81
PNKP-202ENST00000593706 NLGN1Q8N2Q7 840 aa20.12■□□□□ 0.81
PNKP-202ENST00000593706 RC3H1Q5TC82 1133 aaKnown RBP20.11■□□□□ 0.81
PNKP-202ENST00000593706 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
PNKP-202ENST00000593706 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
PNKP-202ENST00000593706 SULT6B1Q6IMI4 303 aa20.1■□□□□ 0.81
PNKP-202ENST00000593706 ARHGEF1Q92888 912 aaKnown RBP20.1■□□□□ 0.81
PNKP-202ENST00000593706 CCDC87Q9NVE4 849 aa20.1■□□□□ 0.81
PNKP-202ENST00000593706 AFDNP55196 1824 aaKnown RBP20.09■□□□□ 0.81
PNKP-202ENST00000593706 RPS6KA4O75676 772 aa20.09■□□□□ 0.81
PNKP-202ENST00000593706 PARP3Q9Y6F1 533 aa20.09■□□□□ 0.81
PNKP-202ENST00000593706 ADAMTS7Q9UKP4 1686 aa20.09■□□□□ 0.81
PNKP-202ENST00000593706 GYS1P13807 737 aa20.08■□□□□ 0.81
PNKP-202ENST00000593706 TGFB2P61812 414 aa20.08■□□□□ 0.81
PNKP-202ENST00000593706 BCS1LQ9Y276 419 aa20.08■□□□□ 0.81
PNKP-202ENST00000593706 NFATC2IPQ8NCF5 419 aa20.07■□□□□ 0.8
PNKP-202ENST00000593706 SBF1O95248 1867 aa20.07■□□□□ 0.8
PNKP-202ENST00000593706 UBR2Q8IWV8 1755 aa20.06■□□□□ 0.8
PNKP-202ENST00000593706 A0A0G2JLW4 131 aa20.06■□□□□ 0.8
PNKP-202ENST00000593706 CRKLP46109 303 aaKnown RBP20.05■□□□□ 0.8
PNKP-202ENST00000593706 DLEC1Q9Y238 1755 aa20.05■□□□□ 0.8
PNKP-202ENST00000593706 MRC1P22897 1456 aa20.05■□□□□ 0.8
PNKP-202ENST00000593706 CCDC88AQ3V6T2 1871 aa20.03■□□□□ 0.8
PNKP-202ENST00000593706 FCHSD2O94868 740 aa20.03■□□□□ 0.8
PNKP-202ENST00000593706 HSPA6P17066 643 aa20.03■□□□□ 0.8
PNKP-202ENST00000593706 IL13P35225 146 aa20.03■□□□□ 0.8
PNKP-202ENST00000593706 USP42Q9H9J4 1324 aaKnown RBP20.02■□□□□ 0.8
PNKP-202ENST00000593706 DPEP1P16444 411 aa20.02■□□□□ 0.8
PNKP-202ENST00000593706 AKAP4Q5JQC9 854 aa20.02■□□□□ 0.8
PNKP-202ENST00000593706 ARHGAP27Q6ZUM4 889 aa20.02■□□□□ 0.8
PNKP-202ENST00000593706 SRP68Q9UHB9 627 aaKnown RBP20.02■□□□□ 0.8
PNKP-202ENST00000593706 TNRC6CQ9HCJ0 1690 aaKnown RBP20■□□□□ 0.79
PNKP-202ENST00000593706 KCPQ6ZWJ8 1503 aa20■□□□□ 0.79
PNKP-202ENST00000593706 SIPA1L3O60292 1781 aaPredicted RBP20■□□□□ 0.79
PNKP-202ENST00000593706 NRXN2Q9P2S2 1712 aa19.99■□□□□ 0.79
PNKP-202ENST00000593706 KIF3CO14782 793 aa19.99■□□□□ 0.79
PNKP-202ENST00000593706 FKBP8Q14318 412 aa19.99■□□□□ 0.79
PNKP-202ENST00000593706 AMER1Q5JTC6 1135 aaPredicted RBP19.99■□□□□ 0.79
PNKP-202ENST00000593706 SLC52A2Q9HAB3 445 aa19.99■□□□□ 0.79
PNKP-202ENST00000593706 KIF7Q2M1P5 1343 aa19.99■□□□□ 0.79
PNKP-202ENST00000593706 WDR90Q96KV7 1748 aa19.99■□□□□ 0.79
PNKP-202ENST00000593706 HMOX1P09601 288 aa19.98■□□□□ 0.79
PNKP-202ENST00000593706 CACNA1SQ13698 1873 aa19.97■□□□□ 0.79
PNKP-202ENST00000593706 DNAJC10Q8IXB1 793 aa19.97■□□□□ 0.79
PNKP-202ENST00000593706 PIM2Q9P1W9 311 aa19.97■□□□□ 0.79
PNKP-202ENST00000593706 TIAM2Q8IVF5 1701 aa19.96■□□□□ 0.79
PNKP-202ENST00000593706 ZPR1O75312 459 aa19.96■□□□□ 0.79
PNKP-202ENST00000593706 DDR1Q08345 913 aa19.96■□□□□ 0.79
PNKP-202ENST00000593706 INTS5Q6P9B9 1019 aaKnown RBP19.96■□□□□ 0.79
PNKP-202ENST00000593706 SCN7AQ01118 1682 aa19.95■□□□□ 0.78
PNKP-202ENST00000593706 DALRD3Q5D0E6 543 aaKnown RBP19.95■□□□□ 0.78
PNKP-202ENST00000593706 LGR6Q9HBX8 967 aa19.95■□□□□ 0.78
PNKP-202ENST00000593706 COL15A1P39059 1388 aa19.95■□□□□ 0.78
PNKP-202ENST00000593706 RNMTO43148 476 aaKnown RBP19.94■□□□□ 0.78
PNKP-202ENST00000593706 KCNA3P22001 575 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms