RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 SIPA1L3O60292 1781 aaPredicted RBP19.03■□□□□ 0.64
CAPN12-202ENST00000593700 NEFLP07196 543 aa19.02■□□□□ 0.64
CAPN12-202ENST00000593700 AKAP4Q5JQC9 854 aa19.02■□□□□ 0.64
CAPN12-202ENST00000593700 IFT57Q9NWB7 429 aa19.02■□□□□ 0.64
CAPN12-202ENST00000593700 KRT27Q7Z3Y8 459 aa19.01■□□□□ 0.63
CAPN12-202ENST00000593700 TRMT2AQ8IZ69 625 aaKnown RBP19.01■□□□□ 0.63
CAPN12-202ENST00000593700 KDM3BQ7LBC6 1761 aa19.01■□□□□ 0.63
CAPN12-202ENST00000593700 IL2RBP14784 551 aa19■□□□□ 0.63
CAPN12-202ENST00000593700 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
CAPN12-202ENST00000593700 SOCS7O14512 581 aa18.99■□□□□ 0.63
CAPN12-202ENST00000593700 DISP2A7MBM2 1401 aa18.99■□□□□ 0.63
CAPN12-202ENST00000593700 PCDH11XQ9BZA7 1347 aa18.99■□□□□ 0.63
CAPN12-202ENST00000593700 PCDH11YQ9BZA8 1340 aa18.99■□□□□ 0.63
CAPN12-202ENST00000593700 BRWD3Q6RI45 1802 aa18.98■□□□□ 0.63
CAPN12-202ENST00000593700 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
CAPN12-202ENST00000593700 CT47B1P0C2W7 299 aaPredicted RBP18.98■□□□□ 0.63
CAPN12-202ENST00000593700 DDB1Q16531 1140 aa18.98■□□□□ 0.63
CAPN12-202ENST00000593700 CFAP44Q96MT7 982 aa18.98■□□□□ 0.63
CAPN12-202ENST00000593700 RCAN3Q9UKA8 241 aa18.98■□□□□ 0.63
CAPN12-202ENST00000593700 LAS1LQ9Y4W2 734 aaKnown RBP18.97■□□□□ 0.63
CAPN12-202ENST00000593700 CACNA1FO60840 1977 aa18.96■□□□□ 0.63
CAPN12-202ENST00000593700 EXOC5O00471 708 aa18.96■□□□□ 0.63
CAPN12-202ENST00000593700 MCM10Q7L590 875 aa18.96■□□□□ 0.63
CAPN12-202ENST00000593700 IFNL2Q8IZJ0 200 aa18.96■□□□□ 0.63
CAPN12-202ENST00000593700 KLHL34Q8N239 644 aa18.96■□□□□ 0.63
CAPN12-202ENST00000593700 CEMIPQ8WUJ3 1361 aa18.95■□□□□ 0.62
CAPN12-202ENST00000593700 DCTN1Q14203 1278 aa18.95■□□□□ 0.62
CAPN12-202ENST00000593700 CCDC125Q86Z20 511 aa18.95■□□□□ 0.62
CAPN12-202ENST00000593700 THUMPD2Q9BTF0 503 aaKnown RBP18.95■□□□□ 0.62
CAPN12-202ENST00000593700 TNS2Q63HR2 1409 aa18.94■□□□□ 0.62
CAPN12-202ENST00000593700 TEFQ10587 303 aa18.94■□□□□ 0.62
CAPN12-202ENST00000593700 BABAM1Q9NWV8 329 aa18.94■□□□□ 0.62
CAPN12-202ENST00000593700 MRC1P22897 1456 aa18.94■□□□□ 0.62
CAPN12-202ENST00000593700 PLCB2Q00722 1185 aa18.93■□□□□ 0.62
CAPN12-202ENST00000593700 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
CAPN12-202ENST00000593700 ZCRB1Q8TBF4 217 aaKnown RBP18.93■□□□□ 0.62
CAPN12-202ENST00000593700 TSR2Q969E8 191 aaKnown RBP18.93■□□□□ 0.62
CAPN12-202ENST00000593700 SUPT16HQ9Y5B9 1047 aaKnown RBP18.93■□□□□ 0.62
CAPN12-202ENST00000593700 SPDYE2BA6NHP3 402 aa18.92■□□□□ 0.62
CAPN12-202ENST00000593700 ZNF853P0CG23 659 aa18.92■□□□□ 0.62
CAPN12-202ENST00000593700 SPDYE6P0CI01 402 aa18.92■□□□□ 0.62
CAPN12-202ENST00000593700 PHKG2P15735 406 aa18.92■□□□□ 0.62
CAPN12-202ENST00000593700 SPDYE2Q495Y8 402 aa18.92■□□□□ 0.62
CAPN12-202ENST00000593700 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.92■□□□□ 0.62
CAPN12-202ENST00000593700 BCL9O00512 1426 aa18.91■□□□□ 0.62
CAPN12-202ENST00000593700 ZNF428Q96B54 188 aa18.91■□□□□ 0.62
CAPN12-202ENST00000593700 MBIPQ9NS73 344 aa18.91■□□□□ 0.62
CAPN12-202ENST00000593700 TSPYL4Q9UJ04 414 aa18.91■□□□□ 0.62
CAPN12-202ENST00000593700 ITGB4P16144 1822 aa18.9■□□□□ 0.62
CAPN12-202ENST00000593700 DCAF5Q96JK2 942 aa18.9■□□□□ 0.62
CAPN12-202ENST00000593700 DOT1LQ8TEK3 1739 aa18.89■□□□□ 0.61
CAPN12-202ENST00000593700 TOGARAM1Q9Y4F4 1720 aa18.89■□□□□ 0.61
CAPN12-202ENST00000593700 CHL1O00533 1208 aa18.89■□□□□ 0.61
CAPN12-202ENST00000593700 RNMTO43148 476 aaKnown RBP18.89■□□□□ 0.61
CAPN12-202ENST00000593700 EXOSC9Q06265 439 aaKnown RBP18.89■□□□□ 0.61
CAPN12-202ENST00000593700 TAF7Q15545 349 aaPredicted RBP18.89■□□□□ 0.61
CAPN12-202ENST00000593700 IL17REQ8NFR9 667 aa18.89■□□□□ 0.61
CAPN12-202ENST00000593700 KDM6AO15550 1401 aaPredicted RBP18.89■□□□□ 0.61
CAPN12-202ENST00000593700 MPRIPQ6WCQ1 1025 aa18.88■□□□□ 0.61
CAPN12-202ENST00000593700 PAPPAQ13219 1627 aa18.88■□□□□ 0.61
CAPN12-202ENST00000593700 SOS1Q07889 1333 aaPredicted RBP18.87■□□□□ 0.61
CAPN12-202ENST00000593700 SF3B2Q13435 895 aaKnown RBP18.87■□□□□ 0.61
CAPN12-202ENST00000593700 KAT6BQ8WYB5 2073 aa18.87■□□□□ 0.61
CAPN12-202ENST00000593700 SSUH2Q9Y2M2 353 aa18.87■□□□□ 0.61
CAPN12-202ENST00000593700 LAMB4A4D0S4 1761 aa18.86■□□□□ 0.61
CAPN12-202ENST00000593700 RNF123Q5XPI4 1314 aa18.86■□□□□ 0.61
CAPN12-202ENST00000593700 CYP27B1O15528 508 aa18.86■□□□□ 0.61
CAPN12-202ENST00000593700 RRP1P56182 461 aaKnown RBP18.86■□□□□ 0.61
CAPN12-202ENST00000593700 UPF1Q92900 1129 aaKnown RBP eCLIP18.86■□□□□ 0.61
CAPN12-202ENST00000593700 UBR2Q8IWV8 1755 aa18.86■□□□□ 0.61
CAPN12-202ENST00000593700 SPOCK2Q92563 424 aa18.85■□□□□ 0.61
CAPN12-202ENST00000593700 CHMP4AQ9BY43 222 aa18.84■□□□□ 0.61
CAPN12-202ENST00000593700 BTBD11A6QL63 1104 aa18.83■□□□□ 0.6
CAPN12-202ENST00000593700 CANXP27824 592 aaKnown RBP18.83■□□□□ 0.6
CAPN12-202ENST00000593700 TWISTNBQ3B726 338 aaPredicted RBP18.83■□□□□ 0.6
CAPN12-202ENST00000593700 ALDH1L2Q3SY69 923 aa18.83■□□□□ 0.6
CAPN12-202ENST00000593700 PLCD3Q8N3E9 789 aa18.83■□□□□ 0.6
CAPN12-202ENST00000593700 MARCH10Q8NA82 808 aaPredicted RBP18.83■□□□□ 0.6
CAPN12-202ENST00000593700 LGR6Q9HBX8 967 aa18.83■□□□□ 0.6
CAPN12-202ENST00000593700 GTF3C3Q9Y5Q9 886 aa18.83■□□□□ 0.6
CAPN12-202ENST00000593700 KIF16BQ96L93 1317 aa18.82■□□□□ 0.6
CAPN12-202ENST00000593700 NKX1-1Q15270 411 aaPredicted RBP18.82■□□□□ 0.6
CAPN12-202ENST00000593700 DDX54Q8TDD1 881 aaKnown RBP18.82■□□□□ 0.6
CAPN12-202ENST00000593700 SLC52A2Q9HAB3 445 aa18.82■□□□□ 0.6
CAPN12-202ENST00000593700 ERVV-2B6SEH9 535 aa18.81■□□□□ 0.6
CAPN12-202ENST00000593700 RARSP54136 660 aaKnown RBP18.81■□□□□ 0.6
CAPN12-202ENST00000593700 CABP4P57796 275 aa18.81■□□□□ 0.6
CAPN12-202ENST00000593700 SMC4Q9NTJ3 1288 aa18.8■□□□□ 0.6
CAPN12-202ENST00000593700 C5P01031 1676 aa18.79■□□□□ 0.6
CAPN12-202ENST00000593700 HOXB7P09629 217 aa18.79■□□□□ 0.6
CAPN12-202ENST00000593700 BAG6P46379 1132 aa18.79■□□□□ 0.6
CAPN12-202ENST00000593700 ERICH6BQ5W0A0 696 aa18.79■□□□□ 0.6
CAPN12-202ENST00000593700 MS4A1P11836 297 aa18.78■□□□□ 0.6
CAPN12-202ENST00000593700 TTC5Q8N0Z6 440 aa18.78■□□□□ 0.6
CAPN12-202ENST00000593700 BCL11BQ9C0K0 894 aaPredicted RBP18.78■□□□□ 0.6
CAPN12-202ENST00000593700 SBF2Q86WG5 1849 aa18.78■□□□□ 0.6
CAPN12-202ENST00000593700 VAMP4O75379 141 aa18.77■□□□□ 0.6
CAPN12-202ENST00000593700 MIS18AQ9NYP9 233 aa18.77■□□□□ 0.6
CAPN12-202ENST00000593700 EP400Q96L91 3159 aa18.76■□□□□ 0.59
CAPN12-202ENST00000593700 FAM182BQ5T319 152 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms