RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CCER1Q8TC90 406 aaPredicted RBP31.04■■■□□ 2.56
SSBP4-203ENST00000593641 ATG3Q9NT62 314 aa31.04■■■□□ 2.56
SSBP4-203ENST00000593641 ITPK1Q13572 414 aa31.03■■■□□ 2.56
SSBP4-203ENST00000593641 GIGYF1O75420 1035 aaPredicted RBP31.02■■■□□ 2.56
SSBP4-203ENST00000593641 PLEKHO1Q53GL0 409 aaPredicted RBP31.02■■■□□ 2.56
SSBP4-203ENST00000593641 MORC1Q86VD1 984 aa31.02■■■□□ 2.56
SSBP4-203ENST00000593641 ERVV-2B6SEH9 535 aa31.01■■■□□ 2.55
SSBP4-203ENST00000593641 DCAF5Q96JK2 942 aa31■■■□□ 2.55
SSBP4-203ENST00000593641 ZNF831Q5JPB2 1677 aa31■■■□□ 2.55
SSBP4-203ENST00000593641 SENP3-EIF4A1A0A087X0R7 540 aa30.99■■■□□ 2.55
SSBP4-203ENST00000593641 AMOTQ4VCS5 1084 aa30.99■■■□□ 2.55
SSBP4-203ENST00000593641 KDRP35968 1356 aa30.99■■■□□ 2.55
SSBP4-203ENST00000593641 ZNF530Q6P9A1 599 aaPredicted RBP30.98■■■□□ 2.55
SSBP4-203ENST00000593641 KNSTRNQ9Y448 316 aa30.97■■■□□ 2.55
SSBP4-203ENST00000593641 RBM42Q9BTD8 480 aaKnown RBP30.96■■■□□ 2.55
SSBP4-203ENST00000593641 COL5A3P25940 1745 aaPredicted RBP30.95■■■□□ 2.54
SSBP4-203ENST00000593641 KDM6AO15550 1401 aaPredicted RBP30.94■■■□□ 2.54
SSBP4-203ENST00000593641 C1orf141Q5JVX7 400 aa30.94■■■□□ 2.54
SSBP4-203ENST00000593641 RTCBQ9Y3I0 505 aaKnown RBP30.94■■■□□ 2.54
SSBP4-203ENST00000593641 CABP4P57796 275 aa30.93■■■□□ 2.54
SSBP4-203ENST00000593641 TRAPPC3LQ5T215 181 aa30.92■■■□□ 2.54
SSBP4-203ENST00000593641 AEBP1Q8IUX7 1158 aa30.92■■■□□ 2.54
SSBP4-203ENST00000593641 MTHFSP49914 203 aa30.91■■■□□ 2.54
SSBP4-203ENST00000593641 ATP10DQ9P241 1426 aa30.9■■■□□ 2.54
SSBP4-203ENST00000593641 MMP10P09238 476 aa30.9■■■□□ 2.54
SSBP4-203ENST00000593641 SULT6B1Q6IMI4 303 aa30.9■■■□□ 2.54
SSBP4-203ENST00000593641 SLC4A9Q96Q91 983 aa30.9■■■□□ 2.54
SSBP4-203ENST00000593641 ADRA2BP18089 450 aa30.89■■■□□ 2.54
SSBP4-203ENST00000593641 WWC3Q9ULE0 1092 aa30.89■■■□□ 2.54
SSBP4-203ENST00000593641 CNTNAP4Q9C0A0 1308 aa30.89■■■□□ 2.54
SSBP4-203ENST00000593641 RC3H1Q5TC82 1133 aaKnown RBP30.88■■■□□ 2.53
SSBP4-203ENST00000593641 KIF13BQ9NQT8 1826 aa30.88■■■□□ 2.53
SSBP4-203ENST00000593641 MYH14Q7Z406 1995 aaKnown RBP30.87■■■□□ 2.53
SSBP4-203ENST00000593641 NLGN1Q8N2Q7 840 aa30.86■■■□□ 2.53
SSBP4-203ENST00000593641 CICQ96RK0 1608 aaPredicted RBP30.86■■■□□ 2.53
SSBP4-203ENST00000593641 SCN11AQ9UI33 1791 aa30.85■■■□□ 2.53
SSBP4-203ENST00000593641 IL13P35225 146 aa30.84■■■□□ 2.53
SSBP4-203ENST00000593641 ARHGEF1Q92888 912 aaKnown RBP30.84■■■□□ 2.53
SSBP4-203ENST00000593641 C4AP0C0L4 1744 aa30.84■■■□□ 2.53
SSBP4-203ENST00000593641 RFC4P35249 363 aa30.83■■■□□ 2.53
SSBP4-203ENST00000593641 GPBP1L1Q9HC44 474 aaPredicted RBP30.83■■■□□ 2.53
SSBP4-203ENST00000593641 ADCY9O60503 1353 aa30.82■■■□□ 2.52
SSBP4-203ENST00000593641 PTCD1O75127 700 aaKnown RBP30.82■■■□□ 2.52
SSBP4-203ENST00000593641 RPS6KA4O75676 772 aa30.82■■■□□ 2.52
SSBP4-203ENST00000593641 AMER1Q5JTC6 1135 aaPredicted RBP30.82■■■□□ 2.52
SSBP4-203ENST00000593641 NFATC2IPQ8NCF5 419 aa30.82■■■□□ 2.52
SSBP4-203ENST00000593641 N4BP2Q86UW6 1770 aaPredicted RBP30.82■■■□□ 2.52
SSBP4-203ENST00000593641 KIF7Q2M1P5 1343 aa30.8■■■□□ 2.52
SSBP4-203ENST00000593641 PXDNLA1KZ92 1463 aa30.8■■■□□ 2.52
SSBP4-203ENST00000593641 VIRMAQ69YN4 1812 aaKnown RBP30.79■■■□□ 2.52
SSBP4-203ENST00000593641 KIAA1551Q9HCM1 1747 aa30.78■■■□□ 2.52
SSBP4-203ENST00000593641 GYS1P13807 737 aa30.78■■■□□ 2.52
SSBP4-203ENST00000593641 TGFB2P61812 414 aa30.78■■■□□ 2.52
SSBP4-203ENST00000593641 CCDC87Q9NVE4 849 aa30.78■■■□□ 2.52
SSBP4-203ENST00000593641 C10orf71Q711Q0 1435 aa30.78■■■□□ 2.52
SSBP4-203ENST00000593641 TJP1Q07157 1748 aa30.78■■■□□ 2.52
SSBP4-203ENST00000593641 AKAP4Q5JQC9 854 aa30.77■■■□□ 2.52
SSBP4-203ENST00000593641 PARP3Q9Y6F1 533 aa30.77■■■□□ 2.52
SSBP4-203ENST00000593641 CRKLP46109 303 aaKnown RBP30.76■■■□□ 2.51
SSBP4-203ENST00000593641 ZNF526Q8TF50 670 aaPredicted RBP30.76■■■□□ 2.51
SSBP4-203ENST00000593641 BCS1LQ9Y276 419 aa30.72■■■□□ 2.51
SSBP4-203ENST00000593641 BRCA1P38398 1863 aaKnown RBP30.72■■■□□ 2.51
SSBP4-203ENST00000593641 A0A0G2JLW4 131 aa30.71■■■□□ 2.51
SSBP4-203ENST00000593641 HMOX1P09601 288 aa30.71■■■□□ 2.51
SSBP4-203ENST00000593641 SLC52A2Q9HAB3 445 aa30.71■■■□□ 2.51
SSBP4-203ENST00000593641 CEP350Q5VT06 3117 aa30.7■■■□□ 2.51
SSBP4-203ENST00000593641 USP42Q9H9J4 1324 aaKnown RBP30.69■■■□□ 2.5
SSBP4-203ENST00000593641 MRC1P22897 1456 aa30.69■■■□□ 2.5
SSBP4-203ENST00000593641 CC2D1BQ5T0F9 858 aaKnown RBP30.68■■■□□ 2.5
SSBP4-203ENST00000593641 DIAPH1O60610 1272 aaKnown RBP30.67■■■□□ 2.5
SSBP4-203ENST00000593641 DPEP1P16444 411 aa30.67■■■□□ 2.5
SSBP4-203ENST00000593641 SRP68Q9UHB9 627 aaKnown RBP30.67■■■□□ 2.5
SSBP4-203ENST00000593641 LGR6Q9HBX8 967 aa30.66■■■□□ 2.5
SSBP4-203ENST00000593641 PER1O15534 1290 aaPredicted RBP30.65■■■□□ 2.5
SSBP4-203ENST00000593641 RNMTO43148 476 aaKnown RBP30.65■■■□□ 2.5
SSBP4-203ENST00000593641 ARFGEF1Q9Y6D6 1849 aa30.64■■■□□ 2.5
SSBP4-203ENST00000593641 FCHSD2O94868 740 aa30.64■■■□□ 2.5
SSBP4-203ENST00000593641 FKBP8Q14318 412 aa30.64■■■□□ 2.5
SSBP4-203ENST00000593641 INTS5Q6P9B9 1019 aaKnown RBP30.64■■■□□ 2.5
SSBP4-203ENST00000593641 DNAJC10Q8IXB1 793 aa30.64■■■□□ 2.5
SSBP4-203ENST00000593641 ADAMTS7Q9UKP4 1686 aa30.62■■■□□ 2.49
SSBP4-203ENST00000593641 MTHFSDQ2M296 383 aaKnown RBP30.62■■■□□ 2.49
SSBP4-203ENST00000593641 ARHGAP27Q6ZUM4 889 aa30.62■■■□□ 2.49
SSBP4-203ENST00000593641 ZPR1O75312 459 aa30.61■■■□□ 2.49
SSBP4-203ENST00000593641 SLC39A6Q13433 755 aa30.61■■■□□ 2.49
SSBP4-203ENST00000593641 KCPQ6ZWJ8 1503 aa30.59■■■□□ 2.49
SSBP4-203ENST00000593641 SOS1Q07889 1333 aaPredicted RBP30.59■■■□□ 2.49
SSBP4-203ENST00000593641 DDR1Q08345 913 aa30.59■■■□□ 2.49
SSBP4-203ENST00000593641 PIM2Q9P1W9 311 aa30.59■■■□□ 2.49
SSBP4-203ENST00000593641 NPC1L1Q9UHC9 1359 aa30.57■■■□□ 2.48
SSBP4-203ENST00000593641 CYP19A1P11511 503 aaPredicted RBP30.57■■■□□ 2.48
SSBP4-203ENST00000593641 USPL1Q5W0Q7 1092 aa30.57■■■□□ 2.48
SSBP4-203ENST00000593641 UBR2Q8IWV8 1755 aa30.56■■■□□ 2.48
SSBP4-203ENST00000593641 HSPA6P17066 643 aa30.56■■■□□ 2.48
SSBP4-203ENST00000593641 CNGB1Q14028 1251 aaPredicted RBP30.56■■■□□ 2.48
SSBP4-203ENST00000593641 POLRMTO00411 1230 aaKnown RBP30.55■■■□□ 2.48
SSBP4-203ENST00000593641 KIF3CO14782 793 aa30.55■■■□□ 2.48
SSBP4-203ENST00000593641 KCNA3P22001 575 aa30.55■■■□□ 2.48
SSBP4-203ENST00000593641 VSIG10Q8N0Z9 540 aa30.55■■■□□ 2.48
SSBP4-203ENST00000593641 COL15A1P39059 1388 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms