RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 COL5A3P25940 1745 aaPredicted RBP24.07■■□□□ 1.44
RETREG3-212ENST00000593251 HSPA5P11021 654 aaKnown RBP24.05■■□□□ 1.44
RETREG3-212ENST00000593251 PANK3Q9H999 370 aa24.05■■□□□ 1.44
RETREG3-212ENST00000593251 N4BP2Q86UW6 1770 aaPredicted RBP24.05■■□□□ 1.44
RETREG3-212ENST00000593251 ZNF831Q5JPB2 1677 aa24.04■■□□□ 1.44
RETREG3-212ENST00000593251 CLSPNQ9HAW4 1339 aa24.04■■□□□ 1.44
RETREG3-212ENST00000593251 KDRP35968 1356 aa24.03■■□□□ 1.44
RETREG3-212ENST00000593251 KIF13BQ9NQT8 1826 aa24.03■■□□□ 1.44
RETREG3-212ENST00000593251 SLC4A9Q96Q91 983 aa24.03■■□□□ 1.44
RETREG3-212ENST00000593251 RBM42Q9BTD8 480 aaKnown RBP24.03■■□□□ 1.44
RETREG3-212ENST00000593251 KIAA1551Q9HCM1 1747 aa24.03■■□□□ 1.44
RETREG3-212ENST00000593251 EIF4G2P78344 907 aaKnown RBP eCLIP24.02■■□□□ 1.44
RETREG3-212ENST00000593251 ZNF526Q8TF50 670 aaPredicted RBP24.02■■□□□ 1.44
RETREG3-212ENST00000593251 MYH14Q7Z406 1995 aaKnown RBP24.02■■□□□ 1.43
RETREG3-212ENST00000593251 MMP10P09238 476 aa24.01■■□□□ 1.43
RETREG3-212ENST00000593251 ADCY9O60503 1353 aa24.01■■□□□ 1.43
RETREG3-212ENST00000593251 KDM6AO15550 1401 aaPredicted RBP24.01■■□□□ 1.43
RETREG3-212ENST00000593251 CICQ96RK0 1608 aaPredicted RBP24■■□□□ 1.43
RETREG3-212ENST00000593251 ERVV-2B6SEH9 535 aa24■■□□□ 1.43
RETREG3-212ENST00000593251 PLEKHO1Q53GL0 409 aaPredicted RBP24■■□□□ 1.43
RETREG3-212ENST00000593251 ZNF530Q6P9A1 599 aaPredicted RBP24■■□□□ 1.43
RETREG3-212ENST00000593251 GPBP1L1Q9HC44 474 aaPredicted RBP24■■□□□ 1.43
RETREG3-212ENST00000593251 PLEKHG2Q9H7P9 1386 aa24■■□□□ 1.43
RETREG3-212ENST00000593251 C4AP0C0L4 1744 aa23.99■■□□□ 1.43
RETREG3-212ENST00000593251 CEP350Q5VT06 3117 aa23.99■■□□□ 1.43
RETREG3-212ENST00000593251 AEBP1Q8IUX7 1158 aa23.99■■□□□ 1.43
RETREG3-212ENST00000593251 DCAF5Q96JK2 942 aa23.99■■□□□ 1.43
RETREG3-212ENST00000593251 RTCBQ9Y3I0 505 aaKnown RBP23.99■■□□□ 1.43
RETREG3-212ENST00000593251 TRAPPC3LQ5T215 181 aa23.98■■□□□ 1.43
RETREG3-212ENST00000593251 HSP90AB1P08238 724 aaKnown RBP23.97■■□□□ 1.43
RETREG3-212ENST00000593251 PXDNLA1KZ92 1463 aa23.96■■□□□ 1.43
RETREG3-212ENST00000593251 CABP4P57796 275 aa23.96■■□□□ 1.43
RETREG3-212ENST00000593251 MORC1Q86VD1 984 aa23.96■■□□□ 1.43
RETREG3-212ENST00000593251 ARHGEF1Q92888 912 aaKnown RBP23.95■■□□□ 1.42
RETREG3-212ENST00000593251 VIRMAQ69YN4 1812 aaKnown RBP23.95■■□□□ 1.42
RETREG3-212ENST00000593251 SCN11AQ9UI33 1791 aa23.95■■□□□ 1.42
RETREG3-212ENST00000593251 AMOTQ4VCS5 1084 aa23.94■■□□□ 1.42
RETREG3-212ENST00000593251 TJP1Q07157 1748 aa23.93■■□□□ 1.42
RETREG3-212ENST00000593251 CNTNAP4Q9C0A0 1308 aa23.93■■□□□ 1.42
RETREG3-212ENST00000593251 MTHFSP49914 203 aa23.93■■□□□ 1.42
RETREG3-212ENST00000593251 RC3H1Q5TC82 1133 aaKnown RBP23.93■■□□□ 1.42
RETREG3-212ENST00000593251 BRCA1P38398 1863 aaKnown RBP23.93■■□□□ 1.42
RETREG3-212ENST00000593251 PTCD1O75127 700 aaKnown RBP23.92■■□□□ 1.42
RETREG3-212ENST00000593251 C1orf141Q5JVX7 400 aa23.92■■□□□ 1.42
RETREG3-212ENST00000593251 NLGN1Q8N2Q7 840 aa23.92■■□□□ 1.42
RETREG3-212ENST00000593251 A0A0G2JLW4 131 aa23.91■■□□□ 1.42
RETREG3-212ENST00000593251 RPS6KA4O75676 772 aa23.91■■□□□ 1.42
RETREG3-212ENST00000593251 GYS1P13807 737 aa23.91■■□□□ 1.42
RETREG3-212ENST00000593251 RFC4P35249 363 aa23.91■■□□□ 1.42
RETREG3-212ENST00000593251 SULT6B1Q6IMI4 303 aa23.91■■□□□ 1.42
RETREG3-212ENST00000593251 C10orf71Q711Q0 1435 aa23.91■■□□□ 1.42
RETREG3-212ENST00000593251 ADRA2BP18089 450 aa23.9■■□□□ 1.42
RETREG3-212ENST00000593251 NFATC2IPQ8NCF5 419 aa23.9■■□□□ 1.42
RETREG3-212ENST00000593251 BCS1LQ9Y276 419 aa23.89■■□□□ 1.41
RETREG3-212ENST00000593251 TGFB2P61812 414 aa23.88■■□□□ 1.41
RETREG3-212ENST00000593251 KNSTRNQ9Y448 316 aa23.88■■□□□ 1.41
RETREG3-212ENST00000593251 CCDC87Q9NVE4 849 aa23.87■■□□□ 1.41
RETREG3-212ENST00000593251 DPEP1P16444 411 aa23.86■■□□□ 1.41
RETREG3-212ENST00000593251 IL13P35225 146 aa23.86■■□□□ 1.41
RETREG3-212ENST00000593251 CRKLP46109 303 aaKnown RBP23.86■■□□□ 1.41
RETREG3-212ENST00000593251 SRP68Q9UHB9 627 aaKnown RBP23.86■■□□□ 1.41
RETREG3-212ENST00000593251 PARP3Q9Y6F1 533 aa23.86■■□□□ 1.41
RETREG3-212ENST00000593251 ARFGEF1Q9Y6D6 1849 aa23.85■■□□□ 1.41
RETREG3-212ENST00000593251 CCER1Q8TC90 406 aaPredicted RBP23.85■■□□□ 1.41
RETREG3-212ENST00000593251 ADAMTS7Q9UKP4 1686 aa23.83■■□□□ 1.41
RETREG3-212ENST00000593251 KIF3CO14782 793 aa23.83■■□□□ 1.41
RETREG3-212ENST00000593251 HSPA6P17066 643 aa23.83■■□□□ 1.41
RETREG3-212ENST00000593251 ARHGAP27Q6ZUM4 889 aa23.83■■□□□ 1.41
RETREG3-212ENST00000593251 FCHSD2O94868 740 aa23.82■■□□□ 1.4
RETREG3-212ENST00000593251 FKBP8Q14318 412 aa23.81■■□□□ 1.4
RETREG3-212ENST00000593251 USP42Q9H9J4 1324 aaKnown RBP23.81■■□□□ 1.4
RETREG3-212ENST00000593251 KCNA3P22001 575 aa23.8■■□□□ 1.4
RETREG3-212ENST00000593251 AKAP4Q5JQC9 854 aa23.8■■□□□ 1.4
RETREG3-212ENST00000593251 AMER1Q5JTC6 1135 aaPredicted RBP23.8■■□□□ 1.4
RETREG3-212ENST00000593251 LGR6Q9HBX8 967 aa23.8■■□□□ 1.4
RETREG3-212ENST00000593251 HMOX1P09601 288 aa23.79■■□□□ 1.4
RETREG3-212ENST00000593251 DDR1Q08345 913 aa23.79■■□□□ 1.4
RETREG3-212ENST00000593251 INTS5Q6P9B9 1019 aaKnown RBP23.79■■□□□ 1.4
RETREG3-212ENST00000593251 DNAJC10Q8IXB1 793 aa23.78■■□□□ 1.4
RETREG3-212ENST00000593251 SLC52A2Q9HAB3 445 aa23.78■■□□□ 1.4
RETREG3-212ENST00000593251 AFDNP55196 1824 aaKnown RBP23.77■■□□□ 1.4
RETREG3-212ENST00000593251 KIF7Q2M1P5 1343 aa23.77■■□□□ 1.4
RETREG3-212ENST00000593251 MRC1P22897 1456 aa23.76■■□□□ 1.39
RETREG3-212ENST00000593251 SLC39A6Q13433 755 aa23.76■■□□□ 1.39
RETREG3-212ENST00000593251 RNMTO43148 476 aaKnown RBP23.75■■□□□ 1.39
RETREG3-212ENST00000593251 SBF1O95248 1867 aa23.75■■□□□ 1.39
RETREG3-212ENST00000593251 CHRNA5P30532 468 aa23.74■■□□□ 1.39
RETREG3-212ENST00000593251 USPL1Q5W0Q7 1092 aa23.74■■□□□ 1.39
RETREG3-212ENST00000593251 PIM2Q9P1W9 311 aa23.74■■□□□ 1.39
RETREG3-212ENST00000593251 KCPQ6ZWJ8 1503 aa23.74■■□□□ 1.39
RETREG3-212ENST00000593251 NMRK2Q9NPI5 230 aa23.73■■□□□ 1.39
RETREG3-212ENST00000593251 POLRMTO00411 1230 aaKnown RBP23.72■■□□□ 1.39
RETREG3-212ENST00000593251 ZPR1O75312 459 aa23.72■■□□□ 1.39
RETREG3-212ENST00000593251 MTHFSDQ2M296 383 aaKnown RBP23.72■■□□□ 1.39
RETREG3-212ENST00000593251 CC2D1BQ5T0F9 858 aaKnown RBP23.72■■□□□ 1.39
RETREG3-212ENST00000593251 C9orf131Q5VYM1 1079 aa23.72■■□□□ 1.39
RETREG3-212ENST00000593251 SOS1Q07889 1333 aaPredicted RBP23.72■■□□□ 1.39
RETREG3-212ENST00000593251 UBR2Q8IWV8 1755 aa23.72■■□□□ 1.39
RETREG3-212ENST00000593251 CYP19A1P11511 503 aaPredicted RBP23.71■■□□□ 1.39
RETREG3-212ENST00000593251 TM4SF1P30408 202 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms