RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 SHANK3Q9BYB0 1731 aa21.7■■□□□ 1.07
CCDC130-212ENST00000593174 TWISTNBQ3B726 338 aaPredicted RBP21.7■■□□□ 1.06
CCDC130-212ENST00000593174 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.7■■□□□ 1.06
CCDC130-212ENST00000593174 DDX54Q8TDD1 881 aaKnown RBP21.7■■□□□ 1.06
CCDC130-212ENST00000593174 DCAF5Q96JK2 942 aa21.7■■□□□ 1.06
CCDC130-212ENST00000593174 KDM6AO15550 1401 aaPredicted RBP21.7■■□□□ 1.06
CCDC130-212ENST00000593174 BCL9LQ86UU0 1499 aa21.69■■□□□ 1.06
CCDC130-212ENST00000593174 VAMP4O75379 141 aa21.69■■□□□ 1.06
CCDC130-212ENST00000593174 MS4A1P11836 297 aa21.69■■□□□ 1.06
CCDC130-212ENST00000593174 KRT24Q2M2I5 525 aa21.68■■□□□ 1.06
CCDC130-212ENST00000593174 CDCA7Q9BWT1 371 aaPredicted RBP21.68■■□□□ 1.06
CCDC130-212ENST00000593174 BCL2L13Q9BXK5 485 aa21.68■■□□□ 1.06
CCDC130-212ENST00000593174 USP21Q9UK80 565 aa21.68■■□□□ 1.06
CCDC130-212ENST00000593174 SIPA1L3O60292 1781 aaPredicted RBP21.68■■□□□ 1.06
CCDC130-212ENST00000593174 BTBD11A6QL63 1104 aa21.67■■□□□ 1.06
CCDC130-212ENST00000593174 VPS72Q15906 364 aa21.67■■□□□ 1.06
CCDC130-212ENST00000593174 ZNF428Q96B54 188 aa21.67■■□□□ 1.06
CCDC130-212ENST00000593174 SSH1Q8WYL5 1049 aa21.66■■□□□ 1.06
CCDC130-212ENST00000593174 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
CCDC130-212ENST00000593174 EXOC5O00471 708 aa21.66■■□□□ 1.06
CCDC130-212ENST00000593174 SLC52A2Q9HAB3 445 aa21.66■■□□□ 1.06
CCDC130-212ENST00000593174 KDM3BQ7LBC6 1761 aa21.66■■□□□ 1.06
CCDC130-212ENST00000593174 NKX1-1Q15270 411 aaPredicted RBP21.65■■□□□ 1.06
CCDC130-212ENST00000593174 ALDH1L2Q3SY69 923 aa21.65■■□□□ 1.06
CCDC130-212ENST00000593174 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.65■■□□□ 1.06
CCDC130-212ENST00000593174 NOP58Q9Y2X3 529 aaKnown RBP21.64■■□□□ 1.06
CCDC130-212ENST00000593174 CANXP27824 592 aaKnown RBP21.64■■□□□ 1.05
CCDC130-212ENST00000593174 BARGINQ6ZT62 677 aa21.64■■□□□ 1.05
CCDC130-212ENST00000593174 NFATC2IPQ8NCF5 419 aa21.64■■□□□ 1.05
CCDC130-212ENST00000593174 FRAT1Q92837 279 aaPredicted RBP21.64■■□□□ 1.05
CCDC130-212ENST00000593174 CABP4P57796 275 aa21.63■■□□□ 1.05
CCDC130-212ENST00000593174 AFF2P51816 1311 aa21.63■■□□□ 1.05
CCDC130-212ENST00000593174 KCNQ3O43525 872 aa21.62■■□□□ 1.05
CCDC130-212ENST00000593174 MRC1P22897 1456 aa21.61■■□□□ 1.05
CCDC130-212ENST00000593174 IPO9Q96P70 1041 aaKnown RBP21.61■■□□□ 1.05
CCDC130-212ENST00000593174 TNS2Q63HR2 1409 aa21.61■■□□□ 1.05
CCDC130-212ENST00000593174 ERVV-2B6SEH9 535 aa21.61■■□□□ 1.05
CCDC130-212ENST00000593174 EIF4A1P60842 406 aaKnown RBP21.61■■□□□ 1.05
CCDC130-212ENST00000593174 DDB1Q16531 1140 aa21.61■■□□□ 1.05
CCDC130-212ENST00000593174 C20orf194Q5TEA3 1177 aa21.6■■□□□ 1.05
CCDC130-212ENST00000593174 FAM98CQ17RN3 349 aaKnown RBP21.59■■□□□ 1.05
CCDC130-212ENST00000593174 MRPL50Q8N5N7 158 aaKnown RBP21.59■■□□□ 1.05
CCDC130-212ENST00000593174 SOS1Q07889 1333 aaPredicted RBP21.58■■□□□ 1.05
CCDC130-212ENST00000593174 BRPF1P55201 1214 aaPredicted RBP21.57■■□□□ 1.04
CCDC130-212ENST00000593174 SLC39A6Q13433 755 aa21.57■■□□□ 1.04
CCDC130-212ENST00000593174 CRBNQ96SW2 442 aa21.57■■□□□ 1.04
CCDC130-212ENST00000593174 NOB1Q9ULX3 412 aaKnown RBP21.57■■□□□ 1.04
CCDC130-212ENST00000593174 KIF16BQ96L93 1317 aa21.57■■□□□ 1.04
CCDC130-212ENST00000593174 KAT6BQ8WYB5 2073 aa21.57■■□□□ 1.04
CCDC130-212ENST00000593174 ZKSCAN2Q63HK3 967 aa21.56■■□□□ 1.04
CCDC130-212ENST00000593174 ZNF790Q6PG37 636 aa21.56■■□□□ 1.04
CCDC130-212ENST00000593174 PDE3AQ14432 1141 aa21.56■■□□□ 1.04
CCDC130-212ENST00000593174 TOGARAM1Q9Y4F4 1720 aa21.56■■□□□ 1.04
CCDC130-212ENST00000593174 IPO8O15397 1037 aaKnown RBP21.54■■□□□ 1.04
CCDC130-212ENST00000593174 TRPC5Q9UL62 973 aaPredicted RBP21.54■■□□□ 1.04
CCDC130-212ENST00000593174 TTC5Q8N0Z6 440 aa21.53■■□□□ 1.04
CCDC130-212ENST00000593174 GJD4Q96KN9 370 aaPredicted RBP21.53■■□□□ 1.04
CCDC130-212ENST00000593174 ZBTB47Q9UFB7 747 aaPredicted RBP21.53■■□□□ 1.04
CCDC130-212ENST00000593174 TNNQ9UQP3 1299 aa21.53■■□□□ 1.04
CCDC130-212ENST00000593174 ATRNO75882 1429 aa21.53■■□□□ 1.04
CCDC130-212ENST00000593174 HOXB7P09629 217 aa21.53■■□□□ 1.04
CCDC130-212ENST00000593174 CCDC30Q5VVM6 783 aa21.53■■□□□ 1.04
CCDC130-212ENST00000593174 HEG1Q9ULI3 1381 aa21.52■■□□□ 1.04
CCDC130-212ENST00000593174 A0A0G2JS52 829 aa21.52■■□□□ 1.04
CCDC130-212ENST00000593174 ATF7IPQ6VMQ6 1270 aa21.52■■□□□ 1.04
CCDC130-212ENST00000593174 MARCH10Q8NA82 808 aaPredicted RBP21.52■■□□□ 1.04
CCDC130-212ENST00000593174 PANK1Q8TE04 598 aa21.52■■□□□ 1.04
CCDC130-212ENST00000593174 NECTIN2Q92692 538 aa21.52■■□□□ 1.04
CCDC130-212ENST00000593174 TMOD3Q9NYL9 352 aa21.52■■□□□ 1.04
CCDC130-212ENST00000593174 ITGB4P16144 1822 aa21.52■■□□□ 1.04
CCDC130-212ENST00000593174 GLI3P10071 1580 aa21.52■■□□□ 1.03
CCDC130-212ENST00000593174 GIGYF1O75420 1035 aaPredicted RBP21.51■■□□□ 1.03
CCDC130-212ENST00000593174 PDE4AP27815 886 aa21.51■■□□□ 1.03
CCDC130-212ENST00000593174 CENPQQ7L2Z9 268 aaPredicted RBP21.51■■□□□ 1.03
CCDC130-212ENST00000593174 CLUAP1Q96AJ1 413 aa21.51■■□□□ 1.03
CCDC130-212ENST00000593174 STK31Q9BXU1 1019 aa21.51■■□□□ 1.03
CCDC130-212ENST00000593174 SLC4A2P04920 1241 aa21.51■■□□□ 1.03
CCDC130-212ENST00000593174 HDGFL1Q5TGJ6 251 aa21.51■■□□□ 1.03
CCDC130-212ENST00000593174 BACH2Q9BYV9 841 aa21.51■■□□□ 1.03
CCDC130-212ENST00000593174 CACNA1FO60840 1977 aa21.5■■□□□ 1.03
CCDC130-212ENST00000593174 TRIM27P14373 513 aa21.5■■□□□ 1.03
CCDC130-212ENST00000593174 EIF2S2P20042 333 aaKnown RBP21.5■■□□□ 1.03
CCDC130-212ENST00000593174 DZIP1LQ8IYY4 767 aaKnown RBP21.5■■□□□ 1.03
CCDC130-212ENST00000593174 CHMP4AQ9BY43 222 aa21.5■■□□□ 1.03
CCDC130-212ENST00000593174 QTRT2Q9H974 415 aaKnown RBP21.5■■□□□ 1.03
CCDC130-212ENST00000593174 RLBP1P12271 317 aa21.49■■□□□ 1.03
CCDC130-212ENST00000593174 FTSJ3Q8IY81 847 aaKnown RBP21.49■■□□□ 1.03
CCDC130-212ENST00000593174 ARHGAP45Q92619 1136 aa21.49■■□□□ 1.03
CCDC130-212ENST00000593174 ZNF496Q96IT1 587 aaPredicted RBP21.49■■□□□ 1.03
CCDC130-212ENST00000593174 FMNL2Q96PY5 1086 aa21.49■■□□□ 1.03
CCDC130-212ENST00000593174 PIGBQ92521 554 aa21.48■■□□□ 1.03
CCDC130-212ENST00000593174 COG6Q9Y2V7 657 aa21.48■■□□□ 1.03
CCDC130-212ENST00000593174 THSD7AQ9UPZ6 1657 aa21.48■■□□□ 1.03
CCDC130-212ENST00000593174 PAPPAQ13219 1627 aa21.47■■□□□ 1.03
CCDC130-212ENST00000593174 DOT1LQ8TEK3 1739 aa21.47■■□□□ 1.03
CCDC130-212ENST00000593174 PRAMEF22A3QJZ6 481 aa21.46■■□□□ 1.03
CCDC130-212ENST00000593174 PRIM1P49642 420 aaKnown RBP21.46■■□□□ 1.03
CCDC130-212ENST00000593174 SYTL4Q96C24 671 aaPredicted RBP21.46■■□□□ 1.03
CCDC130-212ENST00000593174 SNRPA1P09661 255 aaKnown RBP21.46■■□□□ 1.03
CCDC130-212ENST00000593174 API5Q9BZZ5 524 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms