RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 EVA1CP58658 441 aa14.08□□□□□ -0.16
TUBD1-215ENST00000593110 SYT17Q9BSW7 474 aa14.08□□□□□ -0.16
TUBD1-215ENST00000593110 FHDC1Q9C0D6 1143 aaPredicted RBP14.08□□□□□ -0.16
TUBD1-215ENST00000593110 SLIT3O75094 1523 aa14.08□□□□□ -0.16
TUBD1-215ENST00000593110 AKAP12Q02952 1782 aa14.08□□□□□ -0.16
TUBD1-215ENST00000593110 AATKQ6ZMQ8 1374 aa14.08□□□□□ -0.16
TUBD1-215ENST00000593110 ACEP12821 1306 aa14.07□□□□□ -0.16
TUBD1-215ENST00000593110 MAP3K5Q99683 1374 aa14.07□□□□□ -0.16
TUBD1-215ENST00000593110 EVI5O60447 810 aa14.06□□□□□ -0.16
TUBD1-215ENST00000593110 SHANK3Q9BYB0 1731 aa14.05□□□□□ -0.16
TUBD1-215ENST00000593110 PLEKHG3A1L390 1219 aa14.05□□□□□ -0.16
TUBD1-215ENST00000593110 ERBB3P21860 1342 aa14.05□□□□□ -0.16
TUBD1-215ENST00000593110 GCP02774 474 aa14.04□□□□□ -0.16
TUBD1-215ENST00000593110 ARHGEF1Q92888 912 aaKnown RBP14.04□□□□□ -0.16
TUBD1-215ENST00000593110 ARIH1Q9Y4X5 557 aaPredicted RBP14.04□□□□□ -0.16
TUBD1-215ENST00000593110 FAM205CA6NFA0 338 aa14.03□□□□□ -0.16
TUBD1-215ENST00000593110 MARCH10Q8NA82 808 aaPredicted RBP14.03□□□□□ -0.16
TUBD1-215ENST00000593110 COL24A1Q17RW2 1714 aa14.03□□□□□ -0.16
TUBD1-215ENST00000593110 PIK3C2AO00443 1686 aa14.02□□□□□ -0.16
TUBD1-215ENST00000593110 NHSQ6T4R5 1651 aa14.02□□□□□ -0.16
TUBD1-215ENST00000593110 SLC15A2Q16348 729 aa14.02□□□□□ -0.17
TUBD1-215ENST00000593110 DDB1Q16531 1140 aa14.02□□□□□ -0.17
TUBD1-215ENST00000593110 TXNRD1Q16881 649 aa14.02□□□□□ -0.17
TUBD1-215ENST00000593110 ABTB2Q8N961 1025 aa14.02□□□□□ -0.17
TUBD1-215ENST00000593110 CDK19Q9BWU1 502 aa14.02□□□□□ -0.17
TUBD1-215ENST00000593110 MTFR1LQ9H019 292 aa14.02□□□□□ -0.17
TUBD1-215ENST00000593110 POTEMA6NI47 508 aa14.01□□□□□ -0.17
TUBD1-215ENST00000593110 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
TUBD1-215ENST00000593110 LHX6Q9UPM6 363 aa14.01□□□□□ -0.17
TUBD1-215ENST00000593110 SPDYE16A6NNV3 312 aaPredicted RBP14□□□□□ -0.17
TUBD1-215ENST00000593110 PDIA6Q15084 440 aa14□□□□□ -0.17
TUBD1-215ENST00000593110 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
TUBD1-215ENST00000593110 STK32BQ9NY57 414 aa13.99□□□□□ -0.17
TUBD1-215ENST00000593110 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
TUBD1-215ENST00000593110 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
TUBD1-215ENST00000593110 PPIP5K1Q6PFW1 1433 aa13.98□□□□□ -0.17
TUBD1-215ENST00000593110 BRD4O60885 1362 aaPredicted RBP13.98□□□□□ -0.17
TUBD1-215ENST00000593110 WDR17Q8IZU2 1322 aa13.98□□□□□ -0.17
TUBD1-215ENST00000593110 VARS2Q5ST30 1063 aaKnown RBP13.98□□□□□ -0.17
TUBD1-215ENST00000593110 NLRP13Q86W25 1043 aa13.98□□□□□ -0.17
TUBD1-215ENST00000593110 RGPD5Q99666 1765 aa13.98□□□□□ -0.17
TUBD1-215ENST00000593110 QSER1Q2KHR3 1735 aa13.98□□□□□ -0.17
TUBD1-215ENST00000593110 USP6P35125 1406 aa13.98□□□□□ -0.17
TUBD1-215ENST00000593110 ABCC6O95255 1503 aa13.97□□□□□ -0.17
TUBD1-215ENST00000593110 HS3ST6Q96QI5 342 aa13.97□□□□□ -0.17
TUBD1-215ENST00000593110 ARXQ96QS3 562 aa13.97□□□□□ -0.17
TUBD1-215ENST00000593110 AXIN2Q9Y2T1 843 aa13.97□□□□□ -0.17
TUBD1-215ENST00000593110 KIAA1210Q9ULL0 1709 aa13.97□□□□□ -0.17
TUBD1-215ENST00000593110 QRICH2Q9H0J4 1663 aa13.96□□□□□ -0.17
TUBD1-215ENST00000593110 GIGYF1O75420 1035 aaPredicted RBP13.96□□□□□ -0.17
TUBD1-215ENST00000593110 DCAF11Q8TEB1 546 aa13.96□□□□□ -0.17
TUBD1-215ENST00000593110 TOM1L2Q6ZVM7 507 aa13.95□□□□□ -0.18
TUBD1-215ENST00000593110 NFAT5O94916 1531 aa13.95□□□□□ -0.18
TUBD1-215ENST00000593110 BTAF1O14981 1849 aa13.94□□□□□ -0.18
TUBD1-215ENST00000593110 TUBGCP6Q96RT7 1819 aa13.94□□□□□ -0.18
TUBD1-215ENST00000593110 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
TUBD1-215ENST00000593110 CDCA7Q9BWT1 371 aaPredicted RBP13.94□□□□□ -0.18
TUBD1-215ENST00000593110 STAC3Q96MF2 364 aa13.93□□□□□ -0.18
TUBD1-215ENST00000593110 ZNF454Q8N9F8 522 aa13.92□□□□□ -0.18
TUBD1-215ENST00000593110 CARD10Q9BWT7 1032 aa13.92□□□□□ -0.18
TUBD1-215ENST00000593110 PPP4R3BQ5MIZ7 849 aa13.91□□□□□ -0.18
TUBD1-215ENST00000593110 ARHGEF25Q86VW2 580 aa13.91□□□□□ -0.18
TUBD1-215ENST00000593110 ZBTB7CA1YPR0 619 aa13.9□□□□□ -0.18
TUBD1-215ENST00000593110 RAB3GAP2Q9H2M9 1393 aa13.9□□□□□ -0.18
TUBD1-215ENST00000593110 CCDC7Q96M83 1385 aa13.89□□□□□ -0.19
TUBD1-215ENST00000593110 GPR162Q16538 588 aa13.89□□□□□ -0.19
TUBD1-215ENST00000593110 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
TUBD1-215ENST00000593110 NLGN2Q8NFZ4 835 aa13.88□□□□□ -0.19
TUBD1-215ENST00000593110 DDX12PQ92771 950 aa13.88□□□□□ -0.19
TUBD1-215ENST00000593110 USP54Q70EL1 1684 aa13.88□□□□□ -0.19
TUBD1-215ENST00000593110 POTEB3A0JP26 581 aa13.87□□□□□ -0.19
TUBD1-215ENST00000593110 FOSBP53539 338 aa13.87□□□□□ -0.19
TUBD1-215ENST00000593110 POTEBQ6S5H4 581 aa13.87□□□□□ -0.19
TUBD1-215ENST00000593110 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
TUBD1-215ENST00000593110 PHF14O94880 888 aa13.86□□□□□ -0.19
TUBD1-215ENST00000593110 SRPK2P78362 688 aaKnown RBP13.86□□□□□ -0.19
TUBD1-215ENST00000593110 ACSBG1Q96GR2 724 aa13.86□□□□□ -0.19
TUBD1-215ENST00000593110 ADCY9O60503 1353 aa13.85□□□□□ -0.19
TUBD1-215ENST00000593110 ATP10DQ9P241 1426 aa13.85□□□□□ -0.19
TUBD1-215ENST00000593110 EXOC5O00471 708 aa13.85□□□□□ -0.19
TUBD1-215ENST00000593110 YBX3P16989 372 aaKnown RBP eCLIP13.85□□□□□ -0.19
TUBD1-215ENST00000593110 NBPF1Q3BBV0 1214 aa13.85□□□□□ -0.19
TUBD1-215ENST00000593110 ZNF687Q8N1G0 1237 aa13.85□□□□□ -0.19
TUBD1-215ENST00000593110 CABP1Q9NZU7 370 aa13.85□□□□□ -0.19
TUBD1-215ENST00000593110 GRXCR2A6NFK2 248 aa13.84□□□□□ -0.19
TUBD1-215ENST00000593110 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
TUBD1-215ENST00000593110 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
TUBD1-215ENST00000593110 LY75O60449 1722 aa13.84□□□□□ -0.19
TUBD1-215ENST00000593110 TYW1BQ6NUM6 668 aa13.83□□□□□ -0.2
TUBD1-215ENST00000593110 ZDHHC16Q969W1 377 aa13.83□□□□□ -0.2
TUBD1-215ENST00000593110 EPAS1Q99814 870 aa13.83□□□□□ -0.2
TUBD1-215ENST00000593110 PCDHGA10Q9Y5H3 936 aa13.83□□□□□ -0.2
TUBD1-215ENST00000593110 TTC21BQ7Z4L5 1316 aa13.83□□□□□ -0.2
TUBD1-215ENST00000593110 MON2Q7Z3U7 1717 aa13.82□□□□□ -0.2
TUBD1-215ENST00000593110 NBR1Q14596 966 aa13.82□□□□□ -0.2
TUBD1-215ENST00000593110 SEMA3EO15041 775 aa13.81□□□□□ -0.2
TUBD1-215ENST00000593110 CSB-PGBD3P0DP91 1061 aa13.81□□□□□ -0.2
TUBD1-215ENST00000593110 CDAN1Q8IWY9 1227 aa13.81□□□□□ -0.2
TUBD1-215ENST00000593110 KCNH5Q8NCM2 988 aa13.81□□□□□ -0.2
TUBD1-215ENST00000593110 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms