RNA–Protein interactions for RNA: ENST00000593035.5

TPGS2-219, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TPGS2, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-219ENST00000593035 KRT24Q2M2I5 525 aa23.35■■□□□ 1.33
TPGS2-219ENST00000593035 PLEKHO1Q53GL0 409 aaPredicted RBP23.35■■□□□ 1.33
TPGS2-219ENST00000593035 MIS18AQ9NYP9 233 aa23.35■■□□□ 1.33
TPGS2-219ENST00000593035 NOB1Q9ULX3 412 aaKnown RBP23.35■■□□□ 1.33
TPGS2-219ENST00000593035 THRAP3Q9Y2W1 955 aaKnown RBP23.35■■□□□ 1.33
TPGS2-219ENST00000593035 AMOTQ4VCS5 1084 aa23.34■■□□□ 1.33
TPGS2-219ENST00000593035 ATF7IPQ6VMQ6 1270 aa23.34■■□□□ 1.33
TPGS2-219ENST00000593035 MRPL50Q8N5N7 158 aaKnown RBP23.34■■□□□ 1.33
TPGS2-219ENST00000593035 CLUAP1Q96AJ1 413 aa23.34■■□□□ 1.33
TPGS2-219ENST00000593035 ZNF530Q6P9A1 599 aaPredicted RBP23.33■■□□□ 1.32
TPGS2-219ENST00000593035 DZIP1LQ8IYY4 767 aaKnown RBP23.33■■□□□ 1.32
TPGS2-219ENST00000593035 TSPYL4Q9UJ04 414 aa23.33■■□□□ 1.32
TPGS2-219ENST00000593035 THSD7AQ9UPZ6 1657 aa23.33■■□□□ 1.32
TPGS2-219ENST00000593035 AKAP4Q5JQC9 854 aa23.31■■□□□ 1.32
TPGS2-219ENST00000593035 KDM2BQ8NHM5 1336 aa23.31■■□□□ 1.32
TPGS2-219ENST00000593035 DISP2A7MBM2 1401 aa23.31■■□□□ 1.32
TPGS2-219ENST00000593035 MS4A1P11836 297 aa23.3■■□□□ 1.32
TPGS2-219ENST00000593035 BRWD3Q6RI45 1802 aa23.3■■□□□ 1.32
TPGS2-219ENST00000593035 IPO8O15397 1037 aaKnown RBP23.3■■□□□ 1.32
TPGS2-219ENST00000593035 MEGF6O75095 1541 aa23.3■■□□□ 1.32
TPGS2-219ENST00000593035 EP400Q96L91 3159 aa23.3■■□□□ 1.32
TPGS2-219ENST00000593035 MVPQ14764 893 aaKnown RBP23.29■■□□□ 1.32
TPGS2-219ENST00000593035 FTSJ3Q8IY81 847 aaKnown RBP23.29■■□□□ 1.32
TPGS2-219ENST00000593035 LGR6Q9HBX8 967 aa23.29■■□□□ 1.32
TPGS2-219ENST00000593035 TSHZ2Q9NRE2 1034 aa23.29■■□□□ 1.32
TPGS2-219ENST00000593035 BABAM1Q9NWV8 329 aa23.29■■□□□ 1.32
TPGS2-219ENST00000593035 WNK3Q9BYP7 1800 aa23.29■■□□□ 1.32
TPGS2-219ENST00000593035 TCERG1O14776 1098 aaKnown RBP23.28■■□□□ 1.32
TPGS2-219ENST00000593035 TAF7Q15545 349 aaPredicted RBP23.28■■□□□ 1.32
TPGS2-219ENST00000593035 FAM182BQ5T319 152 aa23.28■■□□□ 1.32
TPGS2-219ENST00000593035 IL2RBP14784 551 aa23.28■■□□□ 1.32
TPGS2-219ENST00000593035 OVOS2A0A0G2JMS6 1433 aa23.27■■□□□ 1.32
TPGS2-219ENST00000593035 ADAMTS7Q9UKP4 1686 aa23.27■■□□□ 1.32
TPGS2-219ENST00000593035 PLEKHG2Q9H7P9 1386 aa23.27■■□□□ 1.32
TPGS2-219ENST00000593035 RAPGEF4Q8WZA2 1011 aa23.27■■□□□ 1.32
TPGS2-219ENST00000593035 ARHGAP45Q92619 1136 aa23.27■■□□□ 1.32
TPGS2-219ENST00000593035 AAMPQ13685 434 aa23.26■■□□□ 1.31
TPGS2-219ENST00000593035 VIRMAQ69YN4 1812 aaKnown RBP23.26■■□□□ 1.31
TPGS2-219ENST00000593035 C1orf141Q5JVX7 400 aa23.25■■□□□ 1.31
TPGS2-219ENST00000593035 KRT27Q7Z3Y8 459 aa23.25■■□□□ 1.31
TPGS2-219ENST00000593035 PARP4Q9UKK3 1724 aaKnown RBP23.25■■□□□ 1.31
TPGS2-219ENST00000593035 DDB1Q16531 1140 aa23.25■■□□□ 1.31
TPGS2-219ENST00000593035 KDM3BQ7LBC6 1761 aa23.24■■□□□ 1.31
TPGS2-219ENST00000593035 RNMTO43148 476 aaKnown RBP23.24■■□□□ 1.31
TPGS2-219ENST00000593035 MPRIPQ6WCQ1 1025 aa23.24■■□□□ 1.31
TPGS2-219ENST00000593035 TMEM57Q8N5G2 664 aa23.24■■□□□ 1.31
TPGS2-219ENST00000593035 PKD1L3Q7Z443 1732 aa23.23■■□□□ 1.31
TPGS2-219ENST00000593035 TATP17735 454 aaPredicted RBP23.23■■□□□ 1.31
TPGS2-219ENST00000593035 CENPQQ7L2Z9 268 aaPredicted RBP23.23■■□□□ 1.31
TPGS2-219ENST00000593035 CDCA7Q9BWT1 371 aaPredicted RBP23.23■■□□□ 1.31
TPGS2-219ENST00000593035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.23■■□□□ 1.311e-7■■□□□ 11.7
TPGS2-219ENST00000593035 EXOC5O00471 708 aa23.21■■□□□ 1.31
TPGS2-219ENST00000593035 ABCC4O15439 1325 aa23.21■■□□□ 1.31
TPGS2-219ENST00000593035 SIPA1L3O60292 1781 aaPredicted RBP23.2■■□□□ 1.3
TPGS2-219ENST00000593035 ITPRIPQ8IWB1 547 aa23.2■■□□□ 1.3
TPGS2-219ENST00000593035 DDX19BQ9UMR2 479 aa23.2■■□□□ 1.3
TPGS2-219ENST00000593035 SPG7Q9UQ90 795 aa23.19■■□□□ 1.3
TPGS2-219ENST00000593035 PCDHB15Q9Y5E8 787 aa23.19■■□□□ 1.3
TPGS2-219ENST00000593035 IGHDP01880 384 aa23.19■■□□□ 1.3
TPGS2-219ENST00000593035 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
TPGS2-219ENST00000593035 TNS2Q63HR2 1409 aa23.19■■□□□ 1.3
TPGS2-219ENST00000593035 KDM6AO15550 1401 aaPredicted RBP23.18■■□□□ 1.3
TPGS2-219ENST00000593035 TEFQ10587 303 aa23.18■■□□□ 1.3
TPGS2-219ENST00000593035 MARCH10Q8NA82 808 aaPredicted RBP23.18■■□□□ 1.3
TPGS2-219ENST00000593035 PHKG2P15735 406 aa23.17■■□□□ 1.3
TPGS2-219ENST00000593035 API5Q9BZZ5 524 aaKnown RBP23.17■■□□□ 1.3
TPGS2-219ENST00000593035 SCN11AQ9UI33 1791 aa23.17■■□□□ 1.3
TPGS2-219ENST00000593035 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
TPGS2-219ENST00000593035 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
TPGS2-219ENST00000593035 EIF4A1P60842 406 aaKnown RBP23.15■■□□□ 1.3
TPGS2-219ENST00000593035 CYP27B1O15528 508 aa23.14■■□□□ 1.3
TPGS2-219ENST00000593035 KCNQ3O43525 872 aa23.14■■□□□ 1.3
TPGS2-219ENST00000593035 SLC4A2P04920 1241 aa23.14■■□□□ 1.3
TPGS2-219ENST00000593035 ZBTB40Q9NUA8 1239 aa23.14■■□□□ 1.3
TPGS2-219ENST00000593035 BTBD11A6QL63 1104 aa23.13■■□□□ 1.29
TPGS2-219ENST00000593035 IFNL2Q8IZJ0 200 aa23.13■■□□□ 1.29
TPGS2-219ENST00000593035 SHANK3Q9BYB0 1731 aa23.13■■□□□ 1.29
TPGS2-219ENST00000593035 PTPRCP08575 1304 aa23.13■■□□□ 1.29
TPGS2-219ENST00000593035 SKAP1Q86WV1 359 aa23.13■■□□□ 1.29
TPGS2-219ENST00000593035 MRC1P22897 1456 aa23.12■■□□□ 1.29
TPGS2-219ENST00000593035 CCDC30Q5VVM6 783 aa23.11■■□□□ 1.29
TPGS2-219ENST00000593035 G2E3Q7L622 706 aa23.11■■□□□ 1.29
TPGS2-219ENST00000593035 ZBTB7BO15156 539 aaPredicted RBP23.11■■□□□ 1.29
TPGS2-219ENST00000593035 HEG1Q9ULI3 1381 aa23.1■■□□□ 1.29
TPGS2-219ENST00000593035 CACNA1FO60840 1977 aa23.09■■□□□ 1.29
TPGS2-219ENST00000593035 HOXB7P09629 217 aa23.09■■□□□ 1.29
TPGS2-219ENST00000593035 FAM196AQ6ZSG2 479 aa23.09■■□□□ 1.29
TPGS2-219ENST00000593035 SLC52A2Q9HAB3 445 aa23.09■■□□□ 1.29
TPGS2-219ENST00000593035 INTS3Q68E01 1043 aaKnown RBP23.08■■□□□ 1.29
TPGS2-219ENST00000593035 UPF1Q92900 1129 aaKnown RBP eCLIP23.08■■□□□ 1.29
TPGS2-219ENST00000593035 DCAF5Q96JK2 942 aa23.08■■□□□ 1.29
TPGS2-219ENST00000593035 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
TPGS2-219ENST00000593035 NECTIN2Q92692 538 aa23.08■■□□□ 1.28
TPGS2-219ENST00000593035 PCDH11XQ9BZA7 1347 aa23.07■■□□□ 1.28
TPGS2-219ENST00000593035 PCDH11YQ9BZA8 1340 aa23.07■■□□□ 1.28
TPGS2-219ENST00000593035 HDGFL1Q5TGJ6 251 aa23.07■■□□□ 1.28
TPGS2-219ENST00000593035 SOCS7O14512 581 aa23.06■■□□□ 1.28
TPGS2-219ENST00000593035 TRIM37O94972 964 aa23.06■■□□□ 1.28
TPGS2-219ENST00000593035 PTF1AQ7RTS3 328 aa23.06■■□□□ 1.28
TPGS2-219ENST00000593035 ACSBG1Q96GR2 724 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms