RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 KCNA3P22001 575 aa15.25■□□□□ 0.03
RANBP3-230ENST00000593025 HMGB2P26583 209 aaKnown RBP15.25■□□□□ 0.03
RANBP3-230ENST00000593025 TGFB2P61812 414 aa15.25■□□□□ 0.03
RANBP3-230ENST00000593025 FSTL1Q12841 308 aa15.25■□□□□ 0.03
RANBP3-230ENST00000593025 NKX1-1Q15270 411 aaPredicted RBP15.25■□□□□ 0.03
RANBP3-230ENST00000593025 ARHGAP27Q6ZUM4 889 aa15.25■□□□□ 0.03
RANBP3-230ENST00000593025 ZNF831Q5JPB2 1677 aa15.25■□□□□ 0.03
RANBP3-230ENST00000593025 SMG6Q86US8 1419 aaKnown RBP15.25■□□□□ 0.03
RANBP3-230ENST00000593025 SBF1O95248 1867 aa15.25■□□□□ 0.03
RANBP3-230ENST00000593025 KDRP35968 1356 aa15.24■□□□□ 0.03
RANBP3-230ENST00000593025 C9orf131Q5VYM1 1079 aa15.24■□□□□ 0.03
RANBP3-230ENST00000593025 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
RANBP3-230ENST00000593025 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
RANBP3-230ENST00000593025 TESK2Q96S53 571 aa15.23■□□□□ 0.03
RANBP3-230ENST00000593025 CARD11Q9BXL7 1154 aa15.23■□□□□ 0.03
RANBP3-230ENST00000593025 ASAP1Q9ULH1 1129 aa15.23■□□□□ 0.03
RANBP3-230ENST00000593025 ANKRD26Q9UPS8 1709 aa15.23■□□□□ 0.03
RANBP3-230ENST00000593025 FYB1O15117 783 aa15.22■□□□□ 0.03
RANBP3-230ENST00000593025 SLC4A9Q96Q91 983 aa15.21■□□□□ 0.03
RANBP3-230ENST00000593025 GGNBP2Q9H3C7 697 aa15.21■□□□□ 0.03
RANBP3-230ENST00000593025 FLT4P35916 1363 aa15.21■□□□□ 0.02
RANBP3-230ENST00000593025 FCHSD2O94868 740 aa15.2■□□□□ 0.02
RANBP3-230ENST00000593025 NEUROD1Q13562 356 aa15.2■□□□□ 0.02
RANBP3-230ENST00000593025 DCAF5Q96JK2 942 aa15.2■□□□□ 0.02
RANBP3-230ENST00000593025 ATG3Q9NT62 314 aa15.2■□□□□ 0.02
RANBP3-230ENST00000593025 MYH14Q7Z406 1995 aaKnown RBP15.2■□□□□ 0.02
RANBP3-230ENST00000593025 GYS1P13807 737 aa15.19■□□□□ 0.02
RANBP3-230ENST00000593025 ATP6V1AP38606 617 aa15.19■□□□□ 0.02
RANBP3-230ENST00000593025 HSPA1AP0DMV8 641 aaKnown RBP15.18■□□□□ 0.02
RANBP3-230ENST00000593025 HSPA1BP0DMV9 641 aaKnown RBP15.18■□□□□ 0.02
RANBP3-230ENST00000593025 RRAGCQ9HB90 399 aa15.18■□□□□ 0.02
RANBP3-230ENST00000593025 KIF24Q5T7B8 1368 aa15.18■□□□□ 0.02
RANBP3-230ENST00000593025 ADAMTS7Q9UKP4 1686 aa15.17■□□□□ 0.02
RANBP3-230ENST00000593025 TMF1P82094 1093 aa15.17■□□□□ 0.02
RANBP3-230ENST00000593025 C16orf71Q8IYS4 520 aaPredicted RBP15.17■□□□□ 0.02
RANBP3-230ENST00000593025 NLGN1Q8N2Q7 840 aa15.17■□□□□ 0.02
RANBP3-230ENST00000593025 TMOD3Q9NYL9 352 aa15.17■□□□□ 0.02
RANBP3-230ENST00000593025 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
RANBP3-230ENST00000593025 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
RANBP3-230ENST00000593025 ARHGEF1Q92888 912 aaKnown RBP15.16■□□□□ 0.02
RANBP3-230ENST00000593025 CCDC87Q9NVE4 849 aa15.16■□□□□ 0.02
RANBP3-230ENST00000593025 RNF181Q9P0P0 153 aa15.16■□□□□ 0.02
RANBP3-230ENST00000593025 TONSLQ96HA7 1378 aa15.15■□□□□ 0.02
RANBP3-230ENST00000593025 TRAPPC3LQ5T215 181 aa15.15■□□□□ 0.02
RANBP3-230ENST00000593025 EMILIN1Q9Y6C2 1016 aa15.15■□□□□ 0.02
RANBP3-230ENST00000593025 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
RANBP3-230ENST00000593025 PHKG2P15735 406 aa15.14■□□□□ 0.01
RANBP3-230ENST00000593025 DDR1Q08345 913 aa15.14■□□□□ 0.01
RANBP3-230ENST00000593025 SMC1BQ8NDV3 1235 aa15.14■□□□□ 0.01
RANBP3-230ENST00000593025 RTCBQ9Y3I0 505 aaKnown RBP15.14■□□□□ 0.01
RANBP3-230ENST00000593025 CNTNAP4Q9C0A0 1308 aa15.14■□□□□ 0.01
RANBP3-230ENST00000593025 ST20-MTHFSA0A0A6YYL1 179 aa15.13■□□□□ 0.01
RANBP3-230ENST00000593025 ADRA2BP18089 450 aa15.13■□□□□ 0.01
RANBP3-230ENST00000593025 TJP1Q07157 1748 aa15.13■□□□□ 0.01
RANBP3-230ENST00000593025 PIM2Q9P1W9 311 aa15.13■□□□□ 0.01
RANBP3-230ENST00000593025 DLEC1Q9Y238 1755 aa15.12■□□□□ 0.01
RANBP3-230ENST00000593025 SLC34A2O95436 690 aa15.12■□□□□ 0.01
RANBP3-230ENST00000593025 CHRNA5P30532 468 aa15.12■□□□□ 0.01
RANBP3-230ENST00000593025 RC3H1Q5TC82 1133 aaKnown RBP15.12■□□□□ 0.01
RANBP3-230ENST00000593025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.01
RANBP3-230ENST00000593025 SPG7Q9UQ90 795 aa15.12■□□□□ 0.01
RANBP3-230ENST00000593025 DALRD3Q5D0E6 543 aaKnown RBP15.11■□□□□ 0.01
RANBP3-230ENST00000593025 EYA1Q99502 592 aa15.11■□□□□ 0.01
RANBP3-230ENST00000593025 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
RANBP3-230ENST00000593025 RPS6KA4O75676 772 aa15.1■□□□□ 0.01
RANBP3-230ENST00000593025 RASSF7Q02833 373 aa15.1■□□□□ 0.01
RANBP3-230ENST00000593025 FKBP8Q14318 412 aa15.1■□□□□ 0.01
RANBP3-230ENST00000593025 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
RANBP3-230ENST00000593025 NRXN2Q9P2S2 1712 aa15.09■□□□□ 0.01
RANBP3-230ENST00000593025 AFDNP55196 1824 aaKnown RBP15.09■□□□□ 0.01
RANBP3-230ENST00000593025 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
RANBP3-230ENST00000593025 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0.01
RANBP3-230ENST00000593025 POTECB2RU33 542 aa15.08■□□□□ 0
RANBP3-230ENST00000593025 RFC4P35249 363 aa15.08■□□□□ 0
RANBP3-230ENST00000593025 CARD14Q9BXL6 1004 aa15.08■□□□□ 0
RANBP3-230ENST00000593025 USP42Q9H9J4 1324 aaKnown RBP15.08■□□□□ 0
RANBP3-230ENST00000593025 ZC3H4Q9UPT8 1303 aaKnown RBP15.08■□□□□ 0
RANBP3-230ENST00000593025 WASHC2AQ641Q2 1341 aa15.07■□□□□ 0
RANBP3-230ENST00000593025 GLTPD2A6NH11 291 aa15.06■□□□□ 0
RANBP3-230ENST00000593025 POLRMTO00411 1230 aaKnown RBP15.06■□□□□ 0
RANBP3-230ENST00000593025 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
RANBP3-230ENST00000593025 VEGFAP15692 232 aaPredicted RBP15.05■□□□□ -0
RANBP3-230ENST00000593025 TM4SF1P30408 202 aa15.05■□□□□ -0
RANBP3-230ENST00000593025 ERVV-2B6SEH9 535 aa15.04■□□□□ -0
RANBP3-230ENST00000593025 LMNB1P20700 586 aa15.03■□□□□ -0
RANBP3-230ENST00000593025 CRKLP46109 303 aaKnown RBP15.03■□□□□ -0
RANBP3-230ENST00000593025 NFKBIEO00221 500 aa15.02■□□□□ -0
RANBP3-230ENST00000593025 FOXN1O15353 648 aa15.02■□□□□ -0
RANBP3-230ENST00000593025 PPM1GO15355 546 aaPredicted RBP15.02■□□□□ -0
RANBP3-230ENST00000593025 INTS5Q6P9B9 1019 aaKnown RBP15.02■□□□□ -0
RANBP3-230ENST00000593025 DICER1Q9UPY3 1922 aaKnown RBP15.02□□□□□ -0.01
RANBP3-230ENST00000593025 EIF4A2Q14240 407 aaKnown RBP15.01□□□□□ -0.01
RANBP3-230ENST00000593025 POLKQ9UBT6 870 aa15.01□□□□□ -0.01
RANBP3-230ENST00000593025 CARMIL3Q8ND23 1372 aa15□□□□□ -0.01
RANBP3-230ENST00000593025 ANKRD31Q8N7Z5 1873 aa15□□□□□ -0.01
RANBP3-230ENST00000593025 MKRN1Q9UHC7 482 aaKnown RBP15□□□□□ -0.01
RANBP3-230ENST00000593025 COL11A2P13942 1736 aaPredicted RBP15□□□□□ -0.01
RANBP3-230ENST00000593025 VIRMAQ69YN4 1812 aaKnown RBP14.99□□□□□ -0.01
RANBP3-230ENST00000593025 PTCD1O75127 700 aaKnown RBP14.99□□□□□ -0.01
RANBP3-230ENST00000593025 POTEIP0CG38 1075 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms