RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ITPK1Q13572 414 aa18.74■□□□□ 0.59
APOC1-208ENST00000592535 LINC00116Q8NCU8 138 aa18.74■□□□□ 0.59
APOC1-208ENST00000592535 ZNF831Q5JPB2 1677 aa18.73■□□□□ 0.59
APOC1-208ENST00000592535 ATP6V1AP38606 617 aa18.73■□□□□ 0.59
APOC1-208ENST00000592535 AMIGO3Q86WK7 504 aa18.73■□□□□ 0.59
APOC1-208ENST00000592535 AK7Q96M32 723 aa18.73■□□□□ 0.59
APOC1-208ENST00000592535 SYT17Q9BSW7 474 aa18.73■□□□□ 0.59
APOC1-208ENST00000592535 POLD1P28340 1107 aa18.72■□□□□ 0.59
APOC1-208ENST00000592535 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.59
APOC1-208ENST00000592535 U2SURPO15042 1029 aaKnown RBP18.71■□□□□ 0.59
APOC1-208ENST00000592535 AKAP4Q5JQC9 854 aa18.71■□□□□ 0.59
APOC1-208ENST00000592535 SMIM5Q71RC9 77 aa18.71■□□□□ 0.59
APOC1-208ENST00000592535 FLAD1Q8NFF5 587 aa18.71■□□□□ 0.59
APOC1-208ENST00000592535 MTHFSDQ2M296 383 aaKnown RBP18.7■□□□□ 0.58
APOC1-208ENST00000592535 MSL1Q68DK7 614 aa18.7■□□□□ 0.58
APOC1-208ENST00000592535 NFATC2IPQ8NCF5 419 aa18.7■□□□□ 0.58
APOC1-208ENST00000592535 SLC4A9Q96Q91 983 aa18.7■□□□□ 0.58
APOC1-208ENST00000592535 RBM42Q9BTD8 480 aaKnown RBP18.7■□□□□ 0.58
APOC1-208ENST00000592535 ADAMTS7Q9UKP4 1686 aa18.69■□□□□ 0.58
APOC1-208ENST00000592535 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
APOC1-208ENST00000592535 PHF14O94880 888 aa18.69■□□□□ 0.58
APOC1-208ENST00000592535 PPP2R1AP30153 589 aa18.69■□□□□ 0.58
APOC1-208ENST00000592535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
APOC1-208ENST00000592535 KLHL34Q8N239 644 aa18.68■□□□□ 0.58
APOC1-208ENST00000592535 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
APOC1-208ENST00000592535 MRC1P22897 1456 aa18.67■□□□□ 0.58
APOC1-208ENST00000592535 DCAF8L1A6NGE4 600 aa18.67■□□□□ 0.58
APOC1-208ENST00000592535 CFAP53Q96M91 514 aa18.67■□□□□ 0.58
APOC1-208ENST00000592535 MYH14Q7Z406 1995 aaKnown RBP18.66■□□□□ 0.58
APOC1-208ENST00000592535 TJP1Q07157 1748 aa18.66■□□□□ 0.58
APOC1-208ENST00000592535 GNPATO15228 680 aa18.66■□□□□ 0.58
APOC1-208ENST00000592535 RNMTO43148 476 aaKnown RBP18.66■□□□□ 0.58
APOC1-208ENST00000592535 SSFA2P28290 1259 aa18.66■□□□□ 0.58
APOC1-208ENST00000592535 CICQ96RK0 1608 aaPredicted RBP18.65■□□□□ 0.58
APOC1-208ENST00000592535 PTCD1O75127 700 aaKnown RBP18.65■□□□□ 0.58
APOC1-208ENST00000592535 SLC52A2Q9HAB3 445 aa18.65■□□□□ 0.58
APOC1-208ENST00000592535 NUDCQ9Y266 331 aa18.62■□□□□ 0.57
APOC1-208ENST00000592535 CNTNAP4Q9C0A0 1308 aa18.62■□□□□ 0.57
APOC1-208ENST00000592535 C4AP0C0L4 1744 aa18.61■□□□□ 0.57
APOC1-208ENST00000592535 PRKAR2BP31323 418 aa18.61■□□□□ 0.57
APOC1-208ENST00000592535 RC3H1Q5TC82 1133 aaKnown RBP18.61■□□□□ 0.57
APOC1-208ENST00000592535 GAS2L2Q8NHY3 880 aa18.61■□□□□ 0.57
APOC1-208ENST00000592535 RSPH6AQ9H0K4 717 aa18.61■□□□□ 0.57
APOC1-208ENST00000592535 RTCBQ9Y3I0 505 aaKnown RBP18.61■□□□□ 0.57
APOC1-208ENST00000592535 SIPA1L3O60292 1781 aaPredicted RBP18.6■□□□□ 0.57
APOC1-208ENST00000592535 UBR2Q8IWV8 1755 aa18.6■□□□□ 0.57
APOC1-208ENST00000592535 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
APOC1-208ENST00000592535 NLGN2Q8NFZ4 835 aa18.6■□□□□ 0.57
APOC1-208ENST00000592535 PHACTR3Q96KR7 559 aa18.6■□□□□ 0.57
APOC1-208ENST00000592535 KCPQ6ZWJ8 1503 aa18.59■□□□□ 0.57
APOC1-208ENST00000592535 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
APOC1-208ENST00000592535 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
APOC1-208ENST00000592535 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
APOC1-208ENST00000592535 RPS6KA4O75676 772 aa18.58■□□□□ 0.56
APOC1-208ENST00000592535 CRKLP46109 303 aaKnown RBP18.58■□□□□ 0.56
APOC1-208ENST00000592535 TRAPPC3LQ5T215 181 aa18.58■□□□□ 0.56
APOC1-208ENST00000592535 CHD4Q14839 1912 aa18.58■□□□□ 0.56
APOC1-208ENST00000592535 YY1P25490 414 aa18.57■□□□□ 0.56
APOC1-208ENST00000592535 IL17REQ8NFR9 667 aa18.57■□□□□ 0.56
APOC1-208ENST00000592535 ARHGEF1Q92888 912 aaKnown RBP18.57■□□□□ 0.56
APOC1-208ENST00000592535 ADRA2BP18089 450 aa18.56■□□□□ 0.56
APOC1-208ENST00000592535 DNAJC10Q8IXB1 793 aa18.56■□□□□ 0.56
APOC1-208ENST00000592535 FCHSD2O94868 740 aa18.54■□□□□ 0.56
APOC1-208ENST00000592535 TEFQ10587 303 aa18.54■□□□□ 0.56
APOC1-208ENST00000592535 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
APOC1-208ENST00000592535 GPR162Q16538 588 aa18.54■□□□□ 0.56
APOC1-208ENST00000592535 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
APOC1-208ENST00000592535 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
APOC1-208ENST00000592535 CD2APQ9Y5K6 639 aa18.54■□□□□ 0.56
APOC1-208ENST00000592535 RFC4P35249 363 aa18.53■□□□□ 0.56
APOC1-208ENST00000592535 CEMIPQ8WUJ3 1361 aa18.53■□□□□ 0.56
APOC1-208ENST00000592535 MMP10P09238 476 aa18.52■□□□□ 0.56
APOC1-208ENST00000592535 CYP19A1P11511 503 aaPredicted RBP18.52■□□□□ 0.56
APOC1-208ENST00000592535 GYS1P13807 737 aa18.52■□□□□ 0.56
APOC1-208ENST00000592535 DLG5Q8TDM6 1919 aa18.52■□□□□ 0.56
APOC1-208ENST00000592535 TTC5Q8N0Z6 440 aa18.51■□□□□ 0.55
APOC1-208ENST00000592535 NLGN1Q8N2Q7 840 aa18.51■□□□□ 0.55
APOC1-208ENST00000592535 CCDC87Q9NVE4 849 aa18.51■□□□□ 0.55
APOC1-208ENST00000592535 KIF13BQ9NQT8 1826 aa18.51■□□□□ 0.55
APOC1-208ENST00000592535 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
APOC1-208ENST00000592535 SRP68Q9UHB9 627 aaKnown RBP18.5■□□□□ 0.55
APOC1-208ENST00000592535 YBX3P16989 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
APOC1-208ENST00000592535 ZNF790Q6PG37 636 aa18.49■□□□□ 0.55
APOC1-208ENST00000592535 ZNF496Q96IT1 587 aaPredicted RBP18.49■□□□□ 0.55
APOC1-208ENST00000592535 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
APOC1-208ENST00000592535 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
APOC1-208ENST00000592535 HEG1Q9ULI3 1381 aa18.48■□□□□ 0.55
APOC1-208ENST00000592535 RALBP1Q15311 655 aa18.48■□□□□ 0.55
APOC1-208ENST00000592535 MCM10Q7L590 875 aa18.48■□□□□ 0.55
APOC1-208ENST00000592535 ZBTB1Q9Y2K1 713 aa18.48■□□□□ 0.55
APOC1-208ENST00000592535 KIAA1551Q9HCM1 1747 aa18.48■□□□□ 0.55
APOC1-208ENST00000592535 KCNQ3O43525 872 aa18.47■□□□□ 0.55
APOC1-208ENST00000592535 RTF1Q92541 710 aaKnown RBP18.47■□□□□ 0.55
APOC1-208ENST00000592535 N4BP2Q86UW6 1770 aaPredicted RBP18.47■□□□□ 0.55
APOC1-208ENST00000592535 BTBD11A6QL63 1104 aa18.46■□□□□ 0.55
APOC1-208ENST00000592535 DCTN1Q14203 1278 aa18.46■□□□□ 0.55
APOC1-208ENST00000592535 COL15A1P39059 1388 aa18.45■□□□□ 0.54
APOC1-208ENST00000592535 FKBP8Q14318 412 aa18.45■□□□□ 0.54
APOC1-208ENST00000592535 PLEKHF1Q96S99 279 aa18.45■□□□□ 0.54
APOC1-208ENST00000592535 C10orf71Q711Q0 1435 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms