RNA–Protein interactions for RNA: ENST00000592361.2

MBD3-210, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-210ENST00000592361 PHF14O94880 888 aa23.14■■□□□ 1.29
MBD3-210ENST00000592361 KDRP35968 1356 aa23.14■■□□□ 1.29
MBD3-210ENST00000592361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.13■■□□□ 1.29
MBD3-210ENST00000592361 ASAP1Q9ULH1 1129 aa23.13■■□□□ 1.29
MBD3-210ENST00000592361 GOLGB1Q14789 3259 aaKnown RBP23.13■■□□□ 1.29
MBD3-210ENST00000592361 GNPATO15228 680 aa23.12■■□□□ 1.29
MBD3-210ENST00000592361 GRIN3BO60391 1043 aa23.12■■□□□ 1.29
MBD3-210ENST00000592361 CD2APQ9Y5K6 639 aa23.12■■□□□ 1.29
MBD3-210ENST00000592361 MTHFSP49914 203 aa23.11■■□□□ 1.29
MBD3-210ENST00000592361 CABP4P57796 275 aa23.11■■□□□ 1.29
MBD3-210ENST00000592361 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
MBD3-210ENST00000592361 SULT6B1Q6IMI4 303 aa23.11■■□□□ 1.29
MBD3-210ENST00000592361 LINC00116Q8NCU8 138 aa23.11■■□□□ 1.29
MBD3-210ENST00000592361 ATG3Q9NT62 314 aa23.11■■□□□ 1.29
MBD3-210ENST00000592361 CICQ96RK0 1608 aaPredicted RBP23.11■■□□□ 1.29
MBD3-210ENST00000592361 KDM6AO15550 1401 aaPredicted RBP23.1■■□□□ 1.29
MBD3-210ENST00000592361 NLGN2Q8NFZ4 835 aa23.09■■□□□ 1.29
MBD3-210ENST00000592361 ZNF784Q8NCA9 323 aaPredicted RBP23.08■■□□□ 1.29
MBD3-210ENST00000592361 RBM42Q9BTD8 480 aaKnown RBP23.08■■□□□ 1.29
MBD3-210ENST00000592361 RTCBQ9Y3I0 505 aaKnown RBP23.08■■□□□ 1.29
MBD3-210ENST00000592361 C4AP0C0L4 1744 aa23.08■■□□□ 1.28
MBD3-210ENST00000592361 IL13P35225 146 aa23.07■■□□□ 1.28
MBD3-210ENST00000592361 AEBP1Q8IUX7 1158 aa23.07■■□□□ 1.28
MBD3-210ENST00000592361 KIF13BQ9NQT8 1826 aa23.06■■□□□ 1.28
MBD3-210ENST00000592361 ADRA2BP18089 450 aa23.06■■□□□ 1.28
MBD3-210ENST00000592361 ITPK1Q13572 414 aa23.06■■□□□ 1.28
MBD3-210ENST00000592361 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
MBD3-210ENST00000592361 NPC1L1Q9UHC9 1359 aa23.05■■□□□ 1.28
MBD3-210ENST00000592361 CNTNAP4Q9C0A0 1308 aa23.05■■□□□ 1.28
MBD3-210ENST00000592361 TRAPPC3LQ5T215 181 aa23.04■■□□□ 1.28
MBD3-210ENST00000592361 RC3H1Q5TC82 1133 aaKnown RBP23.04■■□□□ 1.28
MBD3-210ENST00000592361 TJP1Q07157 1748 aa23.04■■□□□ 1.28
MBD3-210ENST00000592361 AKAP4Q5JQC9 854 aa23.03■■□□□ 1.28
MBD3-210ENST00000592361 DIAPH1O60610 1272 aaKnown RBP23.02■■□□□ 1.28
MBD3-210ENST00000592361 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
MBD3-210ENST00000592361 MRC1P22897 1456 aa23■■□□□ 1.27
MBD3-210ENST00000592361 AMIGO3Q86WK7 504 aa23■■□□□ 1.27
MBD3-210ENST00000592361 NLGN1Q8N2Q7 840 aa23■■□□□ 1.27
MBD3-210ENST00000592361 ADAMTS7Q9UKP4 1686 aa23■■□□□ 1.27
MBD3-210ENST00000592361 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
MBD3-210ENST00000592361 RFC4P35249 363 aa22.99■■□□□ 1.27
MBD3-210ENST00000592361 NFATC2IPQ8NCF5 419 aa22.99■■□□□ 1.27
MBD3-210ENST00000592361 PTCD1O75127 700 aaKnown RBP22.97■■□□□ 1.27
MBD3-210ENST00000592361 RPS6KA4O75676 772 aa22.97■■□□□ 1.27
MBD3-210ENST00000592361 YBX3P16989 372 aaKnown RBP eCLIP22.97■■□□□ 1.27
MBD3-210ENST00000592361 N4BP2Q86UW6 1770 aaPredicted RBP22.96■■□□□ 1.27
MBD3-210ENST00000592361 UBR2Q8IWV8 1755 aa22.96■■□□□ 1.27
MBD3-210ENST00000592361 MMP10P09238 476 aa22.96■■□□□ 1.27
MBD3-210ENST00000592361 HMOX1P09601 288 aa22.96■■□□□ 1.27
MBD3-210ENST00000592361 SLC4A9Q96Q91 983 aa22.95■■□□□ 1.26
MBD3-210ENST00000592361 SLC52A2Q9HAB3 445 aa22.95■■□□□ 1.26
MBD3-210ENST00000592361 SMIM5Q71RC9 77 aa22.94■■□□□ 1.26
MBD3-210ENST00000592361 BRCA1P38398 1863 aaKnown RBP22.94■■□□□ 1.26
MBD3-210ENST00000592361 COL3A1P02461 1466 aaPredicted RBP22.93■■□□□ 1.26
MBD3-210ENST00000592361 CFAP53Q96M91 514 aa22.93■■□□□ 1.26
MBD3-210ENST00000592361 CCDC87Q9NVE4 849 aa22.93■■□□□ 1.26
MBD3-210ENST00000592361 KIAA1551Q9HCM1 1747 aa22.93■■□□□ 1.26
MBD3-210ENST00000592361 GIGYF1O75420 1035 aaPredicted RBP22.92■■□□□ 1.26
MBD3-210ENST00000592361 CRKLP46109 303 aaKnown RBP22.92■■□□□ 1.26
MBD3-210ENST00000592361 ARHGEF1Q92888 912 aaKnown RBP22.92■■□□□ 1.26
MBD3-210ENST00000592361 PARP3Q9Y6F1 533 aa22.92■■□□□ 1.26
MBD3-210ENST00000592361 SIPA1L3O60292 1781 aaPredicted RBP22.91■■□□□ 1.26
MBD3-210ENST00000592361 U2SURPO15042 1029 aaKnown RBP22.91■■□□□ 1.26
MBD3-210ENST00000592361 ARFGEF1Q9Y6D6 1849 aa22.91■■□□□ 1.26
MBD3-210ENST00000592361 C10orf71Q711Q0 1435 aa22.91■■□□□ 1.26
MBD3-210ENST00000592361 RNMTO43148 476 aaKnown RBP22.9■■□□□ 1.26
MBD3-210ENST00000592361 GAS2L2Q8NHY3 880 aa22.9■■□□□ 1.26
MBD3-210ENST00000592361 GYS1P13807 737 aa22.89■■□□□ 1.25
MBD3-210ENST00000592361 TGFB2P61812 414 aa22.89■■□□□ 1.25
MBD3-210ENST00000592361 PXDNLA1KZ92 1463 aa22.88■■□□□ 1.25
MBD3-210ENST00000592361 CNGB1Q14028 1251 aaPredicted RBP22.88■■□□□ 1.25
MBD3-210ENST00000592361 MTHFSDQ2M296 383 aaKnown RBP22.88■■□□□ 1.25
MBD3-210ENST00000592361 TTC5Q8N0Z6 440 aa22.88■■□□□ 1.25
MBD3-210ENST00000592361 KCPQ6ZWJ8 1503 aa22.87■■□□□ 1.25
MBD3-210ENST00000592361 USP42Q9H9J4 1324 aaKnown RBP22.87■■□□□ 1.25
MBD3-210ENST00000592361 ATP10DQ9P241 1426 aa22.86■■□□□ 1.25
MBD3-210ENST00000592361 ZPR1O75312 459 aa22.86■■□□□ 1.25
MBD3-210ENST00000592361 C1QTNF8P60827 252 aa22.86■■□□□ 1.25
MBD3-210ENST00000592361 TEFQ10587 303 aa22.86■■□□□ 1.25
MBD3-210ENST00000592361 VSIG10Q8N0Z9 540 aa22.86■■□□□ 1.25
MBD3-210ENST00000592361 LGR6Q9HBX8 967 aa22.86■■□□□ 1.25
MBD3-210ENST00000592361 NUDCQ9Y266 331 aa22.86■■□□□ 1.25
MBD3-210ENST00000592361 GNAT3A8MTJ3 354 aa22.84■■□□□ 1.25
MBD3-210ENST00000592361 AFDNP55196 1824 aaKnown RBP22.83■■□□□ 1.25
MBD3-210ENST00000592361 DNAJC10Q8IXB1 793 aa22.83■■□□□ 1.25
MBD3-210ENST00000592361 COL15A1P39059 1388 aa22.82■■□□□ 1.24
MBD3-210ENST00000592361 GPBP1L1Q9HC44 474 aaPredicted RBP22.82■■□□□ 1.24
MBD3-210ENST00000592361 ADCY9O60503 1353 aa22.81■■□□□ 1.24
MBD3-210ENST00000592361 SLC39A6Q13433 755 aa22.81■■□□□ 1.24
MBD3-210ENST00000592361 WWC3Q9ULE0 1092 aa22.81■■□□□ 1.24
MBD3-210ENST00000592361 SOS1Q07889 1333 aaPredicted RBP22.81■■□□□ 1.24
MBD3-210ENST00000592361 STARD3NLO95772 234 aa22.8■■□□□ 1.24
MBD3-210ENST00000592361 INTS5Q6P9B9 1019 aaKnown RBP22.8■■□□□ 1.24
MBD3-210ENST00000592361 BCS1LQ9Y276 419 aa22.8■■□□□ 1.24
MBD3-210ENST00000592361 SENP3-EIF4A1A0A087X0R7 540 aa22.79■■□□□ 1.24
MBD3-210ENST00000592361 CYP19A1P11511 503 aaPredicted RBP22.79■■□□□ 1.24
MBD3-210ENST00000592361 TEX13AQ9BXU3 409 aaPredicted RBP22.79■■□□□ 1.24
MBD3-210ENST00000592361 DLEC1Q9Y238 1755 aa22.78■■□□□ 1.24
MBD3-210ENST00000592361 SCN7AQ01118 1682 aa22.78■■□□□ 1.24
MBD3-210ENST00000592361 NPM2Q86SE8 214 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms