RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 AMER1Q5JTC6 1135 aaPredicted RBP25.72■■□□□ 1.71
CCDC43-205ENST00000592333 LINC00116Q8NCU8 138 aa25.72■■□□□ 1.71
CCDC43-205ENST00000592333 KIF7Q2M1P5 1343 aa25.7■■□□□ 1.71
CCDC43-205ENST00000592333 MSL1Q68DK7 614 aa25.7■■□□□ 1.7
CCDC43-205ENST00000592333 IL13P35225 146 aa25.69■■□□□ 1.7
CCDC43-205ENST00000592333 ITPK1Q13572 414 aa25.69■■□□□ 1.7
CCDC43-205ENST00000592333 ZNF530Q6P9A1 599 aaPredicted RBP25.69■■□□□ 1.7
CCDC43-205ENST00000592333 C1orf141Q5JVX7 400 aa25.68■■□□□ 1.7
CCDC43-205ENST00000592333 RC3H1Q5TC82 1133 aaKnown RBP25.68■■□□□ 1.7
CCDC43-205ENST00000592333 AMIGO3Q86WK7 504 aa25.67■■□□□ 1.7
CCDC43-205ENST00000592333 GNPATO15228 680 aa25.66■■□□□ 1.7
CCDC43-205ENST00000592333 PHF14O94880 888 aa25.66■■□□□ 1.7
CCDC43-205ENST00000592333 ADRA2BP18089 450 aa25.66■■□□□ 1.7
CCDC43-205ENST00000592333 MTHFSP49914 203 aa25.66■■□□□ 1.7
CCDC43-205ENST00000592333 CABP4P57796 275 aa25.66■■□□□ 1.7
CCDC43-205ENST00000592333 SULT6B1Q6IMI4 303 aa25.66■■□□□ 1.7
CCDC43-205ENST00000592333 GOLGB1Q14789 3259 aaKnown RBP25.66■■□□□ 1.7
CCDC43-205ENST00000592333 KDM6AO15550 1401 aaPredicted RBP25.65■■□□□ 1.7
CCDC43-205ENST00000592333 PER1O15534 1290 aaPredicted RBP25.65■■□□□ 1.7
CCDC43-205ENST00000592333 PELP1Q8IZL8 1130 aaKnown RBP25.65■■□□□ 1.7
CCDC43-205ENST00000592333 AEBP1Q8IUX7 1158 aa25.64■■□□□ 1.7
CCDC43-205ENST00000592333 RTCBQ9Y3I0 505 aaKnown RBP25.64■■□□□ 1.7
CCDC43-205ENST00000592333 CNTNAP4Q9C0A0 1308 aa25.63■■□□□ 1.69
CCDC43-205ENST00000592333 YBX3P16989 372 aaKnown RBP eCLIP25.62■■□□□ 1.69
CCDC43-205ENST00000592333 TRAPPC3LQ5T215 181 aa25.62■■□□□ 1.69
CCDC43-205ENST00000592333 NPC1L1Q9UHC9 1359 aa25.61■■□□□ 1.69
CCDC43-205ENST00000592333 NLGN1Q8N2Q7 840 aa25.61■■□□□ 1.69
CCDC43-205ENST00000592333 SLC4A9Q96Q91 983 aa25.61■■□□□ 1.69
CCDC43-205ENST00000592333 RBM42Q9BTD8 480 aaKnown RBP25.61■■□□□ 1.69
CCDC43-205ENST00000592333 AKAP4Q5JQC9 854 aa25.6■■□□□ 1.69
CCDC43-205ENST00000592333 RPS6KA4O75676 772 aa25.59■■□□□ 1.69
CCDC43-205ENST00000592333 COL5A3P25940 1745 aaPredicted RBP25.58■■□□□ 1.69
CCDC43-205ENST00000592333 NFATC2IPQ8NCF5 419 aa25.58■■□□□ 1.69
CCDC43-205ENST00000592333 CICQ96RK0 1608 aaPredicted RBP25.56■■□□□ 1.68
CCDC43-205ENST00000592333 SMIM5Q71RC9 77 aa25.56■■□□□ 1.68
CCDC43-205ENST00000592333 SCN11AQ9UI33 1791 aa25.54■■□□□ 1.68
CCDC43-205ENST00000592333 DIAPH1O60610 1272 aaKnown RBP25.54■■□□□ 1.68
CCDC43-205ENST00000592333 ARHGEF1Q92888 912 aaKnown RBP25.54■■□□□ 1.68
CCDC43-205ENST00000592333 MMP10P09238 476 aa25.53■■□□□ 1.68
CCDC43-205ENST00000592333 RFC4P35249 363 aa25.53■■□□□ 1.68
CCDC43-205ENST00000592333 SLC52A2Q9HAB3 445 aa25.52■■□□□ 1.68
CCDC43-205ENST00000592333 PTCD1O75127 700 aaKnown RBP25.51■■□□□ 1.67
CCDC43-205ENST00000592333 C1QTNF8P60827 252 aa25.51■■□□□ 1.67
CCDC43-205ENST00000592333 TGFB2P61812 414 aa25.51■■□□□ 1.67
CCDC43-205ENST00000592333 CC2D1BQ5T0F9 858 aaKnown RBP25.5■■□□□ 1.67
CCDC43-205ENST00000592333 KIF13BQ9NQT8 1826 aa25.49■■□□□ 1.67
CCDC43-205ENST00000592333 MRC1P22897 1456 aa25.49■■□□□ 1.67
CCDC43-205ENST00000592333 GYS1P13807 737 aa25.49■■□□□ 1.67
CCDC43-205ENST00000592333 CRKLP46109 303 aaKnown RBP25.49■■□□□ 1.67
CCDC43-205ENST00000592333 RNMTO43148 476 aaKnown RBP25.47■■□□□ 1.67
CCDC43-205ENST00000592333 GIGYF1O75420 1035 aaPredicted RBP25.47■■□□□ 1.67
CCDC43-205ENST00000592333 HMOX1P09601 288 aa25.47■■□□□ 1.67
CCDC43-205ENST00000592333 MYH14Q7Z406 1995 aaKnown RBP25.47■■□□□ 1.67
CCDC43-205ENST00000592333 ADAMTS7Q9UKP4 1686 aa25.46■■□□□ 1.67
CCDC43-205ENST00000592333 CCDC87Q9NVE4 849 aa25.46■■□□□ 1.67
CCDC43-205ENST00000592333 MTHFSDQ2M296 383 aaKnown RBP25.45■■□□□ 1.66
CCDC43-205ENST00000592333 VSIG10Q8N0Z9 540 aa25.45■■□□□ 1.66
CCDC43-205ENST00000592333 LGR6Q9HBX8 967 aa25.45■■□□□ 1.66
CCDC43-205ENST00000592333 PARP3Q9Y6F1 533 aa25.45■■□□□ 1.66
CCDC43-205ENST00000592333 C10orf71Q711Q0 1435 aa25.45■■□□□ 1.66
CCDC43-205ENST00000592333 TJP1Q07157 1748 aa25.44■■□□□ 1.66
CCDC43-205ENST00000592333 ADCY9O60503 1353 aa25.44■■□□□ 1.66
CCDC43-205ENST00000592333 C4AP0C0L4 1744 aa25.43■■□□□ 1.66
CCDC43-205ENST00000592333 USP42Q9H9J4 1324 aaKnown RBP25.42■■□□□ 1.66
CCDC43-205ENST00000592333 PXDNLA1KZ92 1463 aa25.42■■□□□ 1.66
CCDC43-205ENST00000592333 COL3A1P02461 1466 aaPredicted RBP25.42■■□□□ 1.66
CCDC43-205ENST00000592333 INTS5Q6P9B9 1019 aaKnown RBP25.42■■□□□ 1.66
CCDC43-205ENST00000592333 ATP10DQ9P241 1426 aa25.41■■□□□ 1.66
CCDC43-205ENST00000592333 GAS2L2Q8NHY3 880 aa25.4■■□□□ 1.66
CCDC43-205ENST00000592333 KIAA1551Q9HCM1 1747 aa25.39■■□□□ 1.65
CCDC43-205ENST00000592333 CYP19A1P11511 503 aaPredicted RBP25.38■■□□□ 1.65
CCDC43-205ENST00000592333 DNAJC10Q8IXB1 793 aa25.38■■□□□ 1.65
CCDC43-205ENST00000592333 VIRMAQ69YN4 1812 aaKnown RBP25.37■■□□□ 1.65
CCDC43-205ENST00000592333 CFAP53Q96M91 514 aa25.37■■□□□ 1.65
CCDC43-205ENST00000592333 GPBP1L1Q9HC44 474 aaPredicted RBP25.37■■□□□ 1.65
CCDC43-205ENST00000592333 KCPQ6ZWJ8 1503 aa25.37■■□□□ 1.65
CCDC43-205ENST00000592333 SOS1Q07889 1333 aaPredicted RBP25.37■■□□□ 1.65
CCDC43-205ENST00000592333 ZPR1O75312 459 aa25.36■■□□□ 1.65
CCDC43-205ENST00000592333 A0A0G2JLW4 131 aa25.35■■□□□ 1.65
CCDC43-205ENST00000592333 GNAT3A8MTJ3 354 aa25.35■■□□□ 1.65
CCDC43-205ENST00000592333 U2SURPO15042 1029 aaKnown RBP25.35■■□□□ 1.65
CCDC43-205ENST00000592333 SLC39A6Q13433 755 aa25.35■■□□□ 1.65
CCDC43-205ENST00000592333 FKBP8Q14318 412 aa25.35■■□□□ 1.65
CCDC43-205ENST00000592333 SENP3-EIF4A1A0A087X0R7 540 aa25.34■■□□□ 1.65
CCDC43-205ENST00000592333 TM4SF1P30408 202 aa25.34■■□□□ 1.65
CCDC43-205ENST00000592333 TTC5Q8N0Z6 440 aa25.34■■□□□ 1.65
CCDC43-205ENST00000592333 NARFQ9UHQ1 456 aa25.34■■□□□ 1.65
CCDC43-205ENST00000592333 DPEP1P16444 411 aa25.33■■□□□ 1.65
CCDC43-205ENST00000592333 TEX13AQ9BXU3 409 aaPredicted RBP25.33■■□□□ 1.65
CCDC43-205ENST00000592333 SRP68Q9UHB9 627 aaKnown RBP25.33■■□□□ 1.65
CCDC43-205ENST00000592333 UBR2Q8IWV8 1755 aa25.33■■□□□ 1.65
CCDC43-205ENST00000592333 N4BP2Q86UW6 1770 aaPredicted RBP25.32■■□□□ 1.64
CCDC43-205ENST00000592333 TEFQ10587 303 aa25.32■■□□□ 1.64
CCDC43-205ENST00000592333 NUDCQ9Y266 331 aa25.32■■□□□ 1.64
CCDC43-205ENST00000592333 BCS1LQ9Y276 419 aa25.32■■□□□ 1.64
CCDC43-205ENST00000592333 STARD3NLO95772 234 aa25.31■■□□□ 1.64
CCDC43-205ENST00000592333 PIM2Q9P1W9 311 aa25.31■■□□□ 1.64
CCDC43-205ENST00000592333 COL15A1P39059 1388 aa25.31■■□□□ 1.64
CCDC43-205ENST00000592333 POLRMTO00411 1230 aaKnown RBP25.3■■□□□ 1.64
CCDC43-205ENST00000592333 KCNA3P22001 575 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms