RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 SLC52A2Q9HAB3 445 aa29.27■■■□□ 2.28
SPHK1-210ENST00000592299 EXOC5O00471 708 aa29.27■■■□□ 2.28
SPHK1-210ENST00000592299 ALDH1L2Q3SY69 923 aa29.27■■■□□ 2.28
SPHK1-210ENST00000592299 CDCA7Q9BWT1 371 aaPredicted RBP29.27■■■□□ 2.28
SPHK1-210ENST00000592299 WNK3Q9BYP7 1800 aa29.27■■■□□ 2.28
SPHK1-210ENST00000592299 VPS72Q15906 364 aa29.25■■■□□ 2.27
SPHK1-210ENST00000592299 NFATC2IPQ8NCF5 419 aa29.25■■■□□ 2.27
SPHK1-210ENST00000592299 SIPA1L3O60292 1781 aaPredicted RBP29.24■■■□□ 2.27
SPHK1-210ENST00000592299 CABP4P57796 275 aa29.23■■■□□ 2.27
SPHK1-210ENST00000592299 NKX1-1Q15270 411 aaPredicted RBP29.23■■■□□ 2.27
SPHK1-210ENST00000592299 C20orf194Q5TEA3 1177 aa29.23■■■□□ 2.27
SPHK1-210ENST00000592299 KDM3BQ7LBC6 1761 aa29.23■■■□□ 2.27
SPHK1-210ENST00000592299 TCERG1O14776 1098 aaKnown RBP29.22■■■□□ 2.27
SPHK1-210ENST00000592299 KCNQ3O43525 872 aa29.22■■■□□ 2.27
SPHK1-210ENST00000592299 ERICH6BQ5W0A0 696 aa29.22■■■□□ 2.27
SPHK1-210ENST00000592299 BARGINQ6ZT62 677 aa29.22■■■□□ 2.27
SPHK1-210ENST00000592299 AFF2P51816 1311 aa29.2■■■□□ 2.27
SPHK1-210ENST00000592299 EIF4A1P60842 406 aaKnown RBP29.2■■■□□ 2.27
SPHK1-210ENST00000592299 DDB1Q16531 1140 aa29.2■■■□□ 2.27
SPHK1-210ENST00000592299 FAM98CQ17RN3 349 aaKnown RBP29.19■■■□□ 2.26
SPHK1-210ENST00000592299 MRC1P22897 1456 aa29.19■■■□□ 2.26
SPHK1-210ENST00000592299 TNS2Q63HR2 1409 aa29.19■■■□□ 2.26
SPHK1-210ENST00000592299 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.18■■■□□ 2.26
SPHK1-210ENST00000592299 KIF16BQ96L93 1317 aa29.18■■■□□ 2.26
SPHK1-210ENST00000592299 ERVV-2B6SEH9 535 aa29.17■■■□□ 2.26
SPHK1-210ENST00000592299 NOB1Q9ULX3 412 aaKnown RBP29.17■■■□□ 2.26
SPHK1-210ENST00000592299 SLC39A6Q13433 755 aa29.17■■■□□ 2.26
SPHK1-210ENST00000592299 ZKSCAN2Q63HK3 967 aa29.17■■■□□ 2.26
SPHK1-210ENST00000592299 MRPL50Q8N5N7 158 aaKnown RBP29.17■■■□□ 2.26
SPHK1-210ENST00000592299 EXOC6Q8TAG9 804 aa29.17■■■□□ 2.26
SPHK1-210ENST00000592299 ZNF790Q6PG37 636 aa29.16■■■□□ 2.26
SPHK1-210ENST00000592299 CRBNQ96SW2 442 aa29.15■■■□□ 2.26
SPHK1-210ENST00000592299 BRPF1P55201 1214 aaPredicted RBP29.15■■■□□ 2.26
SPHK1-210ENST00000592299 PDE3AQ14432 1141 aa29.15■■■□□ 2.26
SPHK1-210ENST00000592299 SOS1Q07889 1333 aaPredicted RBP29.14■■■□□ 2.26
SPHK1-210ENST00000592299 IPO8O15397 1037 aaKnown RBP29.13■■■□□ 2.25
SPHK1-210ENST00000592299 CLUAP1Q96AJ1 413 aa29.13■■■□□ 2.25
SPHK1-210ENST00000592299 A0A0G2JS52 829 aa29.13■■■□□ 2.25
SPHK1-210ENST00000592299 MYT1Q01538 1121 aa29.13■■■□□ 2.25
SPHK1-210ENST00000592299 TTC5Q8N0Z6 440 aa29.13■■■□□ 2.25
SPHK1-210ENST00000592299 PANK1Q8TE04 598 aa29.13■■■□□ 2.25
SPHK1-210ENST00000592299 NECTIN2Q92692 538 aa29.13■■■□□ 2.25
SPHK1-210ENST00000592299 TNNQ9UQP3 1299 aa29.13■■■□□ 2.25
SPHK1-210ENST00000592299 CCDC30Q5VVM6 783 aa29.11■■■□□ 2.25
SPHK1-210ENST00000592299 ATF7IPQ6VMQ6 1270 aa29.11■■■□□ 2.25
SPHK1-210ENST00000592299 KAT6BQ8WYB5 2073 aa29.11■■■□□ 2.25
SPHK1-210ENST00000592299 FTSJ3Q8IY81 847 aaKnown RBP29.1■■■□□ 2.25
SPHK1-210ENST00000592299 PPP4R2Q9NY27 417 aa29.1■■■□□ 2.25
SPHK1-210ENST00000592299 TRIM27P14373 513 aa29.1■■■□□ 2.25
SPHK1-210ENST00000592299 STK31Q9BXU1 1019 aa29.1■■■□□ 2.25
SPHK1-210ENST00000592299 TMOD3Q9NYL9 352 aa29.1■■■□□ 2.25
SPHK1-210ENST00000592299 TOGARAM1Q9Y4F4 1720 aa29.1■■■□□ 2.25
SPHK1-210ENST00000592299 SLC4A2P04920 1241 aa29.09■■■□□ 2.25
SPHK1-210ENST00000592299 HOXB7P09629 217 aa29.09■■■□□ 2.25
SPHK1-210ENST00000592299 EIF2S2P20042 333 aaKnown RBP29.09■■■□□ 2.25
SPHK1-210ENST00000592299 HDGFL1Q5TGJ6 251 aa29.09■■■□□ 2.25
SPHK1-210ENST00000592299 GJD4Q96KN9 370 aaPredicted RBP29.09■■■□□ 2.25
SPHK1-210ENST00000592299 TRPC5Q9UL62 973 aaPredicted RBP29.09■■■□□ 2.25
SPHK1-210ENST00000592299 MS4A1P11836 297 aa29.08■■■□□ 2.25
SPHK1-210ENST00000592299 GIGYF1O75420 1035 aaPredicted RBP29.08■■■□□ 2.25
SPHK1-210ENST00000592299 DZIP1LQ8IYY4 767 aaKnown RBP29.08■■■□□ 2.25
SPHK1-210ENST00000592299 RLBP1P12271 317 aa29.07■■■□□ 2.24
SPHK1-210ENST00000592299 COG6Q9Y2V7 657 aa29.07■■■□□ 2.24
SPHK1-210ENST00000592299 MARCH10Q8NA82 808 aaPredicted RBP29.06■■■□□ 2.24
SPHK1-210ENST00000592299 HEG1Q9ULI3 1381 aa29.06■■■□□ 2.24
SPHK1-210ENST00000592299 ZNF496Q96IT1 587 aaPredicted RBP29.06■■■□□ 2.24
SPHK1-210ENST00000592299 CHMP4AQ9BY43 222 aa29.06■■■□□ 2.24
SPHK1-210ENST00000592299 ARHGAP45Q92619 1136 aa29.05■■■□□ 2.24
SPHK1-210ENST00000592299 FBXO41Q8TF61 875 aa29.04■■■□□ 2.24
SPHK1-210ENST00000592299 SYTL4Q96C24 671 aaPredicted RBP29.04■■■□□ 2.24
SPHK1-210ENST00000592299 FMNL2Q96PY5 1086 aa29.04■■■□□ 2.24
SPHK1-210ENST00000592299 QTRT2Q9H974 415 aaKnown RBP29.04■■■□□ 2.24
SPHK1-210ENST00000592299 ATRNO75882 1429 aa29.04■■■□□ 2.24
SPHK1-210ENST00000592299 PRAMEF22A3QJZ6 481 aa29.04■■■□□ 2.24
SPHK1-210ENST00000592299 GLI3P10071 1580 aa29.03■■■□□ 2.24
SPHK1-210ENST00000592299 PIGBQ92521 554 aa29.03■■■□□ 2.24
SPHK1-210ENST00000592299 ITGB4P16144 1822 aa29.03■■■□□ 2.24
SPHK1-210ENST00000592299 PRIM1P49642 420 aaKnown RBP29■■■□□ 2.23
SPHK1-210ENST00000592299 API5Q9BZZ5 524 aaKnown RBP29■■■□□ 2.23
SPHK1-210ENST00000592299 SNRPA1P09661 255 aaKnown RBP28.99■■■□□ 2.23
SPHK1-210ENST00000592299 B4GALNT3Q6L9W6 998 aa28.99■■■□□ 2.23
SPHK1-210ENST00000592299 G2E3Q7L622 706 aa28.99■■■□□ 2.23
SPHK1-210ENST00000592299 CACNA1FO60840 1977 aa28.99■■■□□ 2.23
SPHK1-210ENST00000592299 DOT1LQ8TEK3 1739 aa28.99■■■□□ 2.23
SPHK1-210ENST00000592299 PTPRCP08575 1304 aa28.99■■■□□ 2.23
SPHK1-210ENST00000592299 PTCD1O75127 700 aaKnown RBP28.98■■■□□ 2.23
SPHK1-210ENST00000592299 ACSBG1Q96GR2 724 aa28.98■■■□□ 2.23
SPHK1-210ENST00000592299 CHPF2Q9P2E5 772 aa28.98■■■□□ 2.23
SPHK1-210ENST00000592299 BCL9O00512 1426 aa28.97■■■□□ 2.23
SPHK1-210ENST00000592299 MVPQ14764 893 aaKnown RBP28.97■■■□□ 2.23
SPHK1-210ENST00000592299 ITPRIPQ8IWB1 547 aa28.97■■■□□ 2.23
SPHK1-210ENST00000592299 CCDC136Q96JN2 1154 aa28.97■■■□□ 2.23
SPHK1-210ENST00000592299 ASAP1Q9ULH1 1129 aa28.97■■■□□ 2.23
SPHK1-210ENST00000592299 THSD7AQ9UPZ6 1657 aa28.97■■■□□ 2.23
SPHK1-210ENST00000592299 PAPPAQ13219 1627 aa28.97■■■□□ 2.23
SPHK1-210ENST00000592299 TMEM57Q8N5G2 664 aa28.97■■■□□ 2.23
SPHK1-210ENST00000592299 C5P01031 1676 aa28.96■■■□□ 2.23
SPHK1-210ENST00000592299 FLIIQ13045 1269 aa28.95■■■□□ 2.23
SPHK1-210ENST00000592299 DBF4Q9UBU7 674 aaPredicted RBP28.95■■■□□ 2.23
SPHK1-210ENST00000592299 UBR2Q8IWV8 1755 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms