RNA–Protein interactions for RNA: ENST00000591798.5

DNMT1-225, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-225ENST00000591798 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
DNMT1-225ENST00000591798 SIK1P57059 783 aa12.19□□□□□ -0.46
DNMT1-225ENST00000591798 C9orf131Q5VYM1 1079 aa12.19□□□□□ -0.46
DNMT1-225ENST00000591798 PIGBQ92521 554 aa12.19□□□□□ -0.46
DNMT1-225ENST00000591798 KCPQ6ZWJ8 1503 aa12.19□□□□□ -0.46
DNMT1-225ENST00000591798 C4AP0C0L4 1744 aa12.18□□□□□ -0.46
DNMT1-225ENST00000591798 GNPATO15228 680 aa12.18□□□□□ -0.46
DNMT1-225ENST00000591798 RRS1Q15050 365 aaKnown RBP12.18□□□□□ -0.46
DNMT1-225ENST00000591798 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
DNMT1-225ENST00000591798 FCHSD2O94868 740 aa12.17□□□□□ -0.46
DNMT1-225ENST00000591798 DPEP1P16444 411 aa12.17□□□□□ -0.46
DNMT1-225ENST00000591798 PUS7Q96PZ0 661 aaKnown RBP12.17□□□□□ -0.46
DNMT1-225ENST00000591798 ITPK1Q13572 414 aa12.16□□□□□ -0.46
DNMT1-225ENST00000591798 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-225ENST00000591798 HSPA1AP0DMV8 641 aaKnown RBP12.15□□□□□ -0.46
DNMT1-225ENST00000591798 HSPA1BP0DMV9 641 aaKnown RBP12.15□□□□□ -0.46
DNMT1-225ENST00000591798 NKX1-1Q15270 411 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-225ENST00000591798 SMC1BQ8NDV3 1235 aa12.15□□□□□ -0.46
DNMT1-225ENST00000591798 RRAGCQ9HB90 399 aa12.15□□□□□ -0.46
DNMT1-225ENST00000591798 CCDC87Q9NVE4 849 aa12.15□□□□□ -0.46
DNMT1-225ENST00000591798 INSRP06213 1382 aa12.15□□□□□ -0.46
DNMT1-225ENST00000591798 ZNF831Q5JPB2 1677 aa12.14□□□□□ -0.47
DNMT1-225ENST00000591798 KCNA3P22001 575 aa12.14□□□□□ -0.47
DNMT1-225ENST00000591798 ATP6V1AP38606 617 aa12.14□□□□□ -0.47
DNMT1-225ENST00000591798 TMF1P82094 1093 aa12.14□□□□□ -0.47
DNMT1-225ENST00000591798 NLGN1Q8N2Q7 840 aa12.14□□□□□ -0.47
DNMT1-225ENST00000591798 SIN3AQ96ST3 1273 aa12.14□□□□□ -0.47
DNMT1-225ENST00000591798 CARD11Q9BXL7 1154 aa12.14□□□□□ -0.47
DNMT1-225ENST00000591798 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
DNMT1-225ENST00000591798 MYH14Q7Z406 1995 aaKnown RBP12.13□□□□□ -0.47
DNMT1-225ENST00000591798 HSP90AB2PQ58FF8 381 aa12.13□□□□□ -0.47
DNMT1-225ENST00000591798 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
DNMT1-225ENST00000591798 RNF181Q9P0P0 153 aa12.13□□□□□ -0.47
DNMT1-225ENST00000591798 ASAP1Q9ULH1 1129 aa12.13□□□□□ -0.47
DNMT1-225ENST00000591798 FLT4P35916 1363 aa12.13□□□□□ -0.47
DNMT1-225ENST00000591798 KIF20BQ96Q89 1820 aa12.13□□□□□ -0.47
DNMT1-225ENST00000591798 NCAPD2Q15021 1401 aa12.12□□□□□ -0.47
DNMT1-225ENST00000591798 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
DNMT1-225ENST00000591798 TMOD3Q9NYL9 352 aa12.12□□□□□ -0.47
DNMT1-225ENST00000591798 PIM2Q9P1W9 311 aa12.12□□□□□ -0.47
DNMT1-225ENST00000591798 RTCBQ9Y3I0 505 aaKnown RBP12.12□□□□□ -0.47
DNMT1-225ENST00000591798 CCDC88AQ3V6T2 1871 aa12.11□□□□□ -0.47
DNMT1-225ENST00000591798 KDRP35968 1356 aa12.11□□□□□ -0.47
DNMT1-225ENST00000591798 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
DNMT1-225ENST00000591798 SLC34A2O95436 690 aa12.11□□□□□ -0.47
DNMT1-225ENST00000591798 GYS1P13807 737 aa12.11□□□□□ -0.47
DNMT1-225ENST00000591798 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
DNMT1-225ENST00000591798 PARP3Q9Y6F1 533 aa12.11□□□□□ -0.47
DNMT1-225ENST00000591798 FYB1O15117 783 aa12.1□□□□□ -0.47
DNMT1-225ENST00000591798 NEUROD1Q13562 356 aa12.1□□□□□ -0.47
DNMT1-225ENST00000591798 DALRD3Q5D0E6 543 aaKnown RBP12.1□□□□□ -0.47
DNMT1-225ENST00000591798 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
DNMT1-225ENST00000591798 GGNBP2Q9H3C7 697 aa12.1□□□□□ -0.47
DNMT1-225ENST00000591798 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
DNMT1-225ENST00000591798 ATG3Q9NT62 314 aa12.09□□□□□ -0.47
DNMT1-225ENST00000591798 SPG7Q9UQ90 795 aa12.09□□□□□ -0.47
DNMT1-225ENST00000591798 ZC3H4Q9UPT8 1303 aaKnown RBP12.09□□□□□ -0.47
DNMT1-225ENST00000591798 RFC4P35249 363 aa12.08□□□□□ -0.48
DNMT1-225ENST00000591798 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
DNMT1-225ENST00000591798 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.48
DNMT1-225ENST00000591798 ANKRD26Q9UPS8 1709 aa12.08□□□□□ -0.48
DNMT1-225ENST00000591798 KDM6AO15550 1401 aaPredicted RBP12.07□□□□□ -0.48
DNMT1-225ENST00000591798 TESK2Q96S53 571 aa12.07□□□□□ -0.48
DNMT1-225ENST00000591798 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.07□□□□□ -0.48
DNMT1-225ENST00000591798 CNTNAP4Q9C0A0 1308 aa12.07□□□□□ -0.48
DNMT1-225ENST00000591798 TONSLQ96HA7 1378 aa12.06□□□□□ -0.48
DNMT1-225ENST00000591798 RPS6KA4O75676 772 aa12.06□□□□□ -0.48
DNMT1-225ENST00000591798 VEGFAP15692 232 aaPredicted RBP12.06□□□□□ -0.48
DNMT1-225ENST00000591798 PHKG2P15735 406 aa12.06□□□□□ -0.48
DNMT1-225ENST00000591798 IFNL2Q8IZJ0 200 aa12.06□□□□□ -0.48
DNMT1-225ENST00000591798 GLTPD2A6NH11 291 aa12.05□□□□□ -0.48
DNMT1-225ENST00000591798 CHRNA5P30532 468 aa12.05□□□□□ -0.48
DNMT1-225ENST00000591798 EMILIN1Q9Y6C2 1016 aa12.05□□□□□ -0.48
DNMT1-225ENST00000591798 DLEC1Q9Y238 1755 aa12.05□□□□□ -0.48
DNMT1-225ENST00000591798 AFDNP55196 1824 aaKnown RBP12.04□□□□□ -0.48
DNMT1-225ENST00000591798 RASSF7Q02833 373 aa12.04□□□□□ -0.48
DNMT1-225ENST00000591798 DDR1Q08345 913 aa12.04□□□□□ -0.48
DNMT1-225ENST00000591798 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
DNMT1-225ENST00000591798 DICER1Q9UPY3 1922 aaKnown RBP12.03□□□□□ -0.48
DNMT1-225ENST00000591798 ST20-MTHFSA0A0A6YYL1 179 aa12.03□□□□□ -0.48
DNMT1-225ENST00000591798 LMNB1P20700 586 aa12.03□□□□□ -0.48
DNMT1-225ENST00000591798 FKBP8Q14318 412 aa12.03□□□□□ -0.48
DNMT1-225ENST00000591798 EYA1Q99502 592 aa12.03□□□□□ -0.48
DNMT1-225ENST00000591798 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
DNMT1-225ENST00000591798 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
DNMT1-225ENST00000591798 SLC24A1O60721 1099 aa12.02□□□□□ -0.49
DNMT1-225ENST00000591798 SRP68Q9UHB9 627 aaKnown RBP12.02□□□□□ -0.49
DNMT1-225ENST00000591798 USP42Q9H9J4 1324 aaKnown RBP12.02□□□□□ -0.49
DNMT1-225ENST00000591798 TJP1Q07157 1748 aa12.01□□□□□ -0.49
DNMT1-225ENST00000591798 NRXN2Q9P2S2 1712 aa12.01□□□□□ -0.49
DNMT1-225ENST00000591798 ERVV-2B6SEH9 535 aa12.01□□□□□ -0.49
DNMT1-225ENST00000591798 POLRMTO00411 1230 aaKnown RBP12.01□□□□□ -0.49
DNMT1-225ENST00000591798 CREBZFQ9NS37 354 aa12.01□□□□□ -0.49
DNMT1-225ENST00000591798 POTECB2RU33 542 aa12□□□□□ -0.49
DNMT1-225ENST00000591798 FOXN1O15353 648 aa12□□□□□ -0.49
DNMT1-225ENST00000591798 CRKLP46109 303 aaKnown RBP12□□□□□ -0.49
DNMT1-225ENST00000591798 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
DNMT1-225ENST00000591798 WASHC2AQ641Q2 1341 aa12□□□□□ -0.49
DNMT1-225ENST00000591798 PPM1GO15355 546 aaPredicted RBP11.99□□□□□ -0.49
DNMT1-225ENST00000591798 TM4SF1P30408 202 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms