RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 PPP1R15AO75807 674 aaPredicted RBP6.69□□□□□ -1.34
VMP1-212ENST00000591782 ATG7O95352 703 aa6.69□□□□□ -1.34
VMP1-212ENST00000591782 FOXD4L5Q5VV16 416 aaPredicted RBP6.69□□□□□ -1.34
VMP1-212ENST00000591782 ANKMY2Q8IV38 441 aa6.69□□□□□ -1.34
VMP1-212ENST00000591782 XAGE2Q96GT9 111 aa6.69□□□□□ -1.34
VMP1-212ENST00000591782 NLRP3Q96P20 1036 aa6.69□□□□□ -1.34
VMP1-212ENST00000591782 ARXQ96QS3 562 aa6.69□□□□□ -1.34
VMP1-212ENST00000591782 SERTAD1Q9UHV2 236 aa6.69□□□□□ -1.34
VMP1-212ENST00000591782 ZMIZ1Q9ULJ6 1067 aa6.69□□□□□ -1.34
VMP1-212ENST00000591782 NOVA2Q9UNW9 492 aaKnown RBP6.69□□□□□ -1.34
VMP1-212ENST00000591782 HRH3Q9Y5N1 445 aa6.69□□□□□ -1.34
VMP1-212ENST00000591782 RBM19Q9Y4C8 960 aaKnown RBP6.68□□□□□ -1.34
VMP1-212ENST00000591782 SOS2Q07890 1332 aaPredicted RBP6.68□□□□□ -1.34
VMP1-212ENST00000591782 TTLL8A6PVC2 850 aa6.67□□□□□ -1.34
VMP1-212ENST00000591782 RNF144AP50876 292 aaPredicted RBP6.67□□□□□ -1.34
VMP1-212ENST00000591782 SEC13P55735 322 aa6.67□□□□□ -1.34
VMP1-212ENST00000591782 CENPCQ03188 943 aa6.67□□□□□ -1.34
VMP1-212ENST00000591782 ELOAQ14241 798 aaKnown RBP6.67□□□□□ -1.34
VMP1-212ENST00000591782 TLR1Q15399 786 aa6.67□□□□□ -1.34
VMP1-212ENST00000591782 RNF217Q8TC41 542 aa6.67□□□□□ -1.34
VMP1-212ENST00000591782 STK32AQ8WU08 396 aa6.67□□□□□ -1.34
VMP1-212ENST00000591782 FIGNL2A6NMB9 653 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 SOBPA7XYQ1 873 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 POTECB2RU33 542 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 BACH1O14867 736 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 SMTNP53814 917 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 SLC27A3Q5K4L6 730 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 TSEN2Q8NCE0 465 aaKnown RBP6.66□□□□□ -1.34
VMP1-212ENST00000591782 FAM200AQ8TCP9 573 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 TRIM47Q96LD4 638 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 SLC4A9Q96Q91 983 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 FHDC1Q9C0D6 1143 aaPredicted RBP6.66□□□□□ -1.34
VMP1-212ENST00000591782 SENP2Q9HC62 589 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 DNMT3LQ9UJW3 386 aa6.66□□□□□ -1.34
VMP1-212ENST00000591782 M0R2N6 131 aa6.65□□□□□ -1.34
VMP1-212ENST00000591782 SNRPBP14678 240 aaKnown RBP6.65□□□□□ -1.34
VMP1-212ENST00000591782 GPC1P35052 558 aa6.65□□□□□ -1.34
VMP1-212ENST00000591782 TMEM164Q5U3C3 297 aa6.65□□□□□ -1.34
VMP1-212ENST00000591782 TNS4Q8IZW8 715 aa6.65□□□□□ -1.34
VMP1-212ENST00000591782 KIFC2Q96AC6 838 aa6.65□□□□□ -1.34
VMP1-212ENST00000591782 GRIP2Q9C0E4 1043 aa6.65□□□□□ -1.34
VMP1-212ENST00000591782 ACIN1Q9UKV3 1341 aaKnown RBP6.65□□□□□ -1.35
VMP1-212ENST00000591782 A6NJY4 79 aa6.64□□□□□ -1.35
VMP1-212ENST00000591782 C11orf95C9JLR9 678 aaPredicted RBP6.64□□□□□ -1.35
VMP1-212ENST00000591782 MAN1A2O60476 641 aa6.64□□□□□ -1.35
VMP1-212ENST00000591782 LGR5O75473 907 aa6.64□□□□□ -1.35
VMP1-212ENST00000591782 EPHA4P54764 986 aa6.64□□□□□ -1.35
VMP1-212ENST00000591782 MTFR1Q15390 333 aa6.64□□□□□ -1.35
VMP1-212ENST00000591782 PRICKLE2Q7Z3G6 844 aa6.64□□□□□ -1.35
VMP1-212ENST00000591782 ZSCAN10Q96SZ4 725 aaPredicted RBP6.64□□□□□ -1.35
VMP1-212ENST00000591782 USP3Q9Y6I4 520 aa6.64□□□□□ -1.35
VMP1-212ENST00000591782 TBCELQ5QJ74 424 aa6.63□□□□□ -1.35
VMP1-212ENST00000591782 LYSMD3Q7Z3D4 306 aa6.63□□□□□ -1.35
VMP1-212ENST00000591782 HINFPQ9BQA5 517 aa6.63□□□□□ -1.35
VMP1-212ENST00000591782 SCHIP1Q9P0W5 487 aaPredicted RBP6.63□□□□□ -1.35
VMP1-212ENST00000591782 IQSEC3Q9UPP2 1182 aaPredicted RBP6.63□□□□□ -1.35
VMP1-212ENST00000591782 CARNS1A5YM72 827 aa6.62□□□□□ -1.35
VMP1-212ENST00000591782 CSB-PGBD3P0DP91 1061 aa6.62□□□□□ -1.35
VMP1-212ENST00000591782 FOXK2Q01167 660 aa6.62□□□□□ -1.35
VMP1-212ENST00000591782 FAM69CQ0P6D2 419 aa6.62□□□□□ -1.35
VMP1-212ENST00000591782 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.62□□□□□ -1.35
VMP1-212ENST00000591782 TMEM214Q6NUQ4 689 aaKnown RBP6.62□□□□□ -1.35
VMP1-212ENST00000591782 RETREG2Q8NC44 543 aa6.62□□□□□ -1.35
VMP1-212ENST00000591782 TSPAN10Q9H1Z9 355 aaPredicted RBP6.62□□□□□ -1.35
VMP1-212ENST00000591782 TMEM88BA6NKF7 163 aa6.61□□□□□ -1.35
VMP1-212ENST00000591782 SPATA31C2B4DYI2 1134 aa6.61□□□□□ -1.35
VMP1-212ENST00000591782 CDK2AP1O14519 115 aa6.61□□□□□ -1.35
VMP1-212ENST00000591782 RHOQP17081 205 aa6.61□□□□□ -1.35
VMP1-212ENST00000591782 POU4F2Q12837 409 aa6.61□□□□□ -1.35
VMP1-212ENST00000591782 PPARGC1BQ86YN6 1023 aaKnown RBP6.61□□□□□ -1.35
VMP1-212ENST00000591782 SLC9A9Q8IVB4 645 aa6.61□□□□□ -1.35
VMP1-212ENST00000591782 RHBDD1Q8TEB9 315 aa6.61□□□□□ -1.35
VMP1-212ENST00000591782 GTF2E1P29083 439 aaPredicted RBP6.6□□□□□ -1.35
VMP1-212ENST00000591782 SWI5Q1ZZU3 235 aa6.6□□□□□ -1.35
VMP1-212ENST00000591782 C4orf17Q53FE4 359 aa6.6□□□□□ -1.35
VMP1-212ENST00000591782 GNASQ5JWF2 1037 aa6.6□□□□□ -1.35
VMP1-212ENST00000591782 NBPF10Q6P3W6 841 aaKnown RBP6.6□□□□□ -1.35
VMP1-212ENST00000591782 TAS1R3Q7RTX0 852 aa6.6□□□□□ -1.35
VMP1-212ENST00000591782 NBPF15Q8N660 670 aa6.6□□□□□ -1.35
VMP1-212ENST00000591782 GAS2L2Q8NHY3 880 aa6.6□□□□□ -1.35
VMP1-212ENST00000591782 C21orf2O43822 256 aa6.59□□□□□ -1.35
VMP1-212ENST00000591782 PRMT3O60678 531 aa6.59□□□□□ -1.35
VMP1-212ENST00000591782 PHKA2P46019 1235 aa6.59□□□□□ -1.35
VMP1-212ENST00000591782 ZNF787Q6DD87 383 aa6.59□□□□□ -1.35
VMP1-212ENST00000591782 ZNF295-AS1Q8N0V1 137 aa6.59□□□□□ -1.35
VMP1-212ENST00000591782 SCG3Q8WXD2 468 aaKnown RBP6.59□□□□□ -1.35
VMP1-212ENST00000591782 CABP1Q9NZU7 370 aa6.59□□□□□ -1.35
VMP1-212ENST00000591782 SLAIN2Q9P270 581 aa6.59□□□□□ -1.35
VMP1-212ENST00000591782 SENP3-EIF4A1A0A087X0R7 540 aa6.58□□□□□ -1.36
VMP1-212ENST00000591782 PLA2G4AP47712 749 aa6.58□□□□□ -1.36
VMP1-212ENST00000591782 PTSQ03393 145 aa6.58□□□□□ -1.36
VMP1-212ENST00000591782 ZDHHC1Q8WTX9 485 aa6.58□□□□□ -1.36
VMP1-212ENST00000591782 PRIMPOLQ96LW4 560 aa6.58□□□□□ -1.36
VMP1-212ENST00000591782 NIFKQ9BYG3 293 aaKnown RBP6.58□□□□□ -1.36
VMP1-212ENST00000591782 USTQ9Y2C2 406 aa6.58□□□□□ -1.36
VMP1-212ENST00000591782 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
VMP1-212ENST00000591782 ATAD2Q6PL18 1390 aa6.57□□□□□ -1.36
VMP1-212ENST00000591782 PPP1R12BO60237 982 aaPredicted RBP6.57□□□□□ -1.36
VMP1-212ENST00000591782 WEE1P30291 646 aa6.57□□□□□ -1.36
VMP1-212ENST00000591782 PSMA6P60900 246 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms