RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.08■■□□□ 1.13
DDX39A-216ENST00000591275 PXDNLA1KZ92 1463 aa22.07■■□□□ 1.12
DDX39A-216ENST00000591275 POLKQ9UBT6 870 aa22.06■■□□□ 1.12
DDX39A-216ENST00000591275 N4BP2Q86UW6 1770 aaPredicted RBP22.06■■□□□ 1.12
DDX39A-216ENST00000591275 CICQ96RK0 1608 aaPredicted RBP22.05■■□□□ 1.12
DDX39A-216ENST00000591275 KIAA1551Q9HCM1 1747 aa22.04■■□□□ 1.12
DDX39A-216ENST00000591275 A0A0G2JLW4 131 aa22.04■■□□□ 1.12
DDX39A-216ENST00000591275 TNNT2P45379 298 aaPredicted RBP22.04■■□□□ 1.12
DDX39A-216ENST00000591275 BCS1LQ9Y276 419 aa22.04■■□□□ 1.12
DDX39A-216ENST00000591275 KIF13BQ9NQT8 1826 aa22.03■■□□□ 1.12
DDX39A-216ENST00000591275 EIF4A2Q14240 407 aaKnown RBP22.03■■□□□ 1.12
DDX39A-216ENST00000591275 TRAPPC3LQ5T215 181 aa22.03■■□□□ 1.12
DDX39A-216ENST00000591275 SLC4A9Q96Q91 983 aa22.03■■□□□ 1.12
DDX39A-216ENST00000591275 RBM42Q9BTD8 480 aaKnown RBP22.03■■□□□ 1.12
DDX39A-216ENST00000591275 RTCBQ9Y3I0 505 aaKnown RBP22.03■■□□□ 1.12
DDX39A-216ENST00000591275 KDRP35968 1356 aa22.02■■□□□ 1.12
DDX39A-216ENST00000591275 TGFB2P61812 414 aa22■■□□□ 1.11
DDX39A-216ENST00000591275 NLGN1Q8N2Q7 840 aa22■■□□□ 1.11
DDX39A-216ENST00000591275 ARHGEF1Q92888 912 aaKnown RBP22■■□□□ 1.11
DDX39A-216ENST00000591275 POLR3GLQ9BT43 218 aa22■■□□□ 1.11
DDX39A-216ENST00000591275 C10orf71Q711Q0 1435 aa21.99■■□□□ 1.11
DDX39A-216ENST00000591275 ARHGAP27Q6ZUM4 889 aa21.99■■□□□ 1.11
DDX39A-216ENST00000591275 DPEP1P16444 411 aa21.98■■□□□ 1.11
DDX39A-216ENST00000591275 ERVV-2B6SEH9 535 aa21.97■■□□□ 1.11
DDX39A-216ENST00000591275 GYS1P13807 737 aa21.97■■□□□ 1.11
DDX39A-216ENST00000591275 CCDC87Q9NVE4 849 aa21.97■■□□□ 1.11
DDX39A-216ENST00000591275 C4AP0C0L4 1744 aa21.97■■□□□ 1.11
DDX39A-216ENST00000591275 COL5A3P25940 1745 aaPredicted RBP21.97■■□□□ 1.11
DDX39A-216ENST00000591275 FCHSD2O94868 740 aa21.96■■□□□ 1.11
DDX39A-216ENST00000591275 RFC4P35249 363 aa21.96■■□□□ 1.11
DDX39A-216ENST00000591275 RC3H1Q5TC82 1133 aaKnown RBP21.96■■□□□ 1.11
DDX39A-216ENST00000591275 NMRK2Q9NPI5 230 aa21.96■■□□□ 1.11
DDX39A-216ENST00000591275 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
DDX39A-216ENST00000591275 RPS6KA4O75676 772 aa21.95■■□□□ 1.1
DDX39A-216ENST00000591275 TOMM70O94826 608 aa21.95■■□□□ 1.1
DDX39A-216ENST00000591275 ADRA2BP18089 450 aa21.95■■□□□ 1.1
DDX39A-216ENST00000591275 APLP1P51693 650 aa21.95■■□□□ 1.1
DDX39A-216ENST00000591275 DCAF5Q96JK2 942 aa21.95■■□□□ 1.1
DDX39A-216ENST00000591275 PARP3Q9Y6F1 533 aa21.95■■□□□ 1.1
DDX39A-216ENST00000591275 MYH14Q7Z406 1995 aaKnown RBP21.95■■□□□ 1.1
DDX39A-216ENST00000591275 CNTNAP4Q9C0A0 1308 aa21.95■■□□□ 1.1
DDX39A-216ENST00000591275 ZNF530Q6P9A1 599 aaPredicted RBP21.94■■□□□ 1.1
DDX39A-216ENST00000591275 KDM6AO15550 1401 aaPredicted RBP21.94■■□□□ 1.1
DDX39A-216ENST00000591275 HSP90AB1P08238 724 aaKnown RBP21.93■■□□□ 1.1
DDX39A-216ENST00000591275 BRCA1P38398 1863 aaKnown RBP21.93■■□□□ 1.1
DDX39A-216ENST00000591275 CABP4P57796 275 aa21.93■■□□□ 1.1
DDX39A-216ENST00000591275 PLEKHO1Q53GL0 409 aaPredicted RBP21.93■■□□□ 1.1
DDX39A-216ENST00000591275 PLEKHG2Q9H7P9 1386 aa21.92■■□□□ 1.1
DDX39A-216ENST00000591275 PTCD1O75127 700 aaKnown RBP21.92■■□□□ 1.1
DDX39A-216ENST00000591275 KCNA3P22001 575 aa21.91■■□□□ 1.1
DDX39A-216ENST00000591275 C9orf131Q5VYM1 1079 aa21.9■■□□□ 1.1
DDX39A-216ENST00000591275 DNAJC5GQ8N7S2 189 aa21.9■■□□□ 1.1
DDX39A-216ENST00000591275 SRP68Q9UHB9 627 aaKnown RBP21.9■■□□□ 1.1
DDX39A-216ENST00000591275 CRKLP46109 303 aaKnown RBP21.88■■□□□ 1.09
DDX39A-216ENST00000591275 MTHFSP49914 203 aa21.88■■□□□ 1.09
DDX39A-216ENST00000591275 AEBP1Q8IUX7 1158 aa21.88■■□□□ 1.09
DDX39A-216ENST00000591275 ARFGEF1Q9Y6D6 1849 aa21.87■■□□□ 1.09
DDX39A-216ENST00000591275 FKBP8Q14318 412 aa21.87■■□□□ 1.09
DDX39A-216ENST00000591275 AMOTQ4VCS5 1084 aa21.87■■□□□ 1.09
DDX39A-216ENST00000591275 NFATC2IPQ8NCF5 419 aa21.87■■□□□ 1.09
DDX39A-216ENST00000591275 PIM2Q9P1W9 311 aa21.87■■□□□ 1.09
DDX39A-216ENST00000591275 DDR1Q08345 913 aa21.86■■□□□ 1.09
DDX39A-216ENST00000591275 C1orf141Q5JVX7 400 aa21.86■■□□□ 1.09
DDX39A-216ENST00000591275 USP42Q9H9J4 1324 aaKnown RBP21.85■■□□□ 1.09
DDX39A-216ENST00000591275 HTRA3P83110 453 aa21.85■■□□□ 1.09
DDX39A-216ENST00000591275 C16orf71Q8IYS4 520 aaPredicted RBP21.85■■□□□ 1.09
DDX39A-216ENST00000591275 WDR90Q96KV7 1748 aa21.84■■□□□ 1.09
DDX39A-216ENST00000591275 CHRNA5P30532 468 aa21.84■■□□□ 1.09
DDX39A-216ENST00000591275 DALRD3Q5D0E6 543 aaKnown RBP21.84■■□□□ 1.09
DDX39A-216ENST00000591275 RBM46Q8TBY0 533 aaKnown RBP21.84■■□□□ 1.09
DDX39A-216ENST00000591275 PANK3Q9H999 370 aa21.84■■□□□ 1.09
DDX39A-216ENST00000591275 KCPQ6ZWJ8 1503 aa21.84■■□□□ 1.09
DDX39A-216ENST00000591275 TJP1Q07157 1748 aa21.83■■□□□ 1.09
DDX39A-216ENST00000591275 RNF181Q9P0P0 153 aa21.83■■□□□ 1.09
DDX39A-216ENST00000591275 SULT6B1Q6IMI4 303 aa21.81■■□□□ 1.08
DDX39A-216ENST00000591275 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
DDX39A-216ENST00000591275 INTS5Q6P9B9 1019 aaKnown RBP21.8■■□□□ 1.08
DDX39A-216ENST00000591275 MORC1Q86VD1 984 aa21.8■■□□□ 1.08
DDX39A-216ENST00000591275 TIMELESSQ9UNS1 1208 aa21.8■■□□□ 1.08
DDX39A-216ENST00000591275 KDM2BQ8NHM5 1336 aa21.8■■□□□ 1.08
DDX39A-216ENST00000591275 POLRMTO00411 1230 aaKnown RBP21.79■■□□□ 1.08
DDX39A-216ENST00000591275 RRAGCQ9HB90 399 aa21.79■■□□□ 1.08
DDX39A-216ENST00000591275 USPL1Q5W0Q7 1092 aa21.78■■□□□ 1.08
DDX39A-216ENST00000591275 DNAJC10Q8IXB1 793 aa21.78■■□□□ 1.08
DDX39A-216ENST00000591275 SCN11AQ9UI33 1791 aa21.78■■□□□ 1.08
DDX39A-216ENST00000591275 ADAMTS7Q9UKP4 1686 aa21.78■■□□□ 1.08
DDX39A-216ENST00000591275 SBF1O95248 1867 aa21.77■■□□□ 1.08
DDX39A-216ENST00000591275 ZPR1O75312 459 aa21.77■■□□□ 1.08
DDX39A-216ENST00000591275 TM4SF1P30408 202 aa21.77■■□□□ 1.08
DDX39A-216ENST00000591275 FSTL1Q12841 308 aa21.77■■□□□ 1.08
DDX39A-216ENST00000591275 KLRG1Q96E93 195 aa21.77■■□□□ 1.08
DDX39A-216ENST00000591275 PCNTO95613 3336 aa21.77■■□□□ 1.08
DDX39A-216ENST00000591275 HSPA5P11021 654 aaKnown RBP21.76■■□□□ 1.07
DDX39A-216ENST00000591275 RASSF7Q02833 373 aa21.75■■□□□ 1.07
DDX39A-216ENST00000591275 IL13P35225 146 aa21.74■■□□□ 1.07
DDX39A-216ENST00000591275 EIF4G2P78344 907 aaKnown RBP eCLIP21.74■■□□□ 1.07
DDX39A-216ENST00000591275 SLC52A2Q9HAB3 445 aa21.74■■□□□ 1.07
DDX39A-216ENST00000591275 LGR6Q9HBX8 967 aa21.74■■□□□ 1.07
DDX39A-216ENST00000591275 SOS1Q07889 1333 aaPredicted RBP21.74■■□□□ 1.07
DDX39A-216ENST00000591275 TNRC6CQ9HCJ0 1690 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms