RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 VAMP4O75379 141 aa12.72□□□□□ -0.37
PTPN2-210ENST00000591115 MVPQ14764 893 aaKnown RBP12.72□□□□□ -0.37
PTPN2-210ENST00000591115 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
PTPN2-210ENST00000591115 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
PTPN2-210ENST00000591115 RLBP1P12271 317 aa12.71□□□□□ -0.37
PTPN2-210ENST00000591115 DSG3P32926 999 aa12.71□□□□□ -0.37
PTPN2-210ENST00000591115 VPS72Q15906 364 aa12.71□□□□□ -0.37
PTPN2-210ENST00000591115 FTSJ3Q8IY81 847 aaKnown RBP12.71□□□□□ -0.37
PTPN2-210ENST00000591115 TRIM27P14373 513 aa12.7□□□□□ -0.38
PTPN2-210ENST00000591115 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
PTPN2-210ENST00000591115 RTF1Q92541 710 aaKnown RBP12.7□□□□□ -0.38
PTPN2-210ENST00000591115 TWISTNBQ3B726 338 aaPredicted RBP12.7□□□□□ -0.38
PTPN2-210ENST00000591115 RAPGEF4Q8WZA2 1011 aa12.7□□□□□ -0.38
PTPN2-210ENST00000591115 NOB1Q9ULX3 412 aaKnown RBP12.7□□□□□ -0.38
PTPN2-210ENST00000591115 DDX19BQ9UMR2 479 aa12.7□□□□□ -0.38
PTPN2-210ENST00000591115 EP400Q96L91 3159 aa12.69□□□□□ -0.38
PTPN2-210ENST00000591115 DCTN1Q14203 1278 aa12.69□□□□□ -0.38
PTPN2-210ENST00000591115 BRWD3Q6RI45 1802 aa12.68□□□□□ -0.38
PTPN2-210ENST00000591115 TOGARAM1Q9Y4F4 1720 aa12.68□□□□□ -0.38
PTPN2-210ENST00000591115 IL2RBP14784 551 aa12.68□□□□□ -0.38
PTPN2-210ENST00000591115 TATP17735 454 aaPredicted RBP12.68□□□□□ -0.38
PTPN2-210ENST00000591115 MRPL50Q8N5N7 158 aaKnown RBP12.68□□□□□ -0.38
PTPN2-210ENST00000591115 CHMP4BQ9H444 224 aaKnown RBP12.68□□□□□ -0.38
PTPN2-210ENST00000591115 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
PTPN2-210ENST00000591115 TNS2Q63HR2 1409 aa12.68□□□□□ -0.38
PTPN2-210ENST00000591115 SCN11AQ9UI33 1791 aa12.68□□□□□ -0.38
PTPN2-210ENST00000591115 GNAT3A8MTJ3 354 aa12.67□□□□□ -0.38
PTPN2-210ENST00000591115 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
PTPN2-210ENST00000591115 MCM10Q7L590 875 aa12.67□□□□□ -0.38
PTPN2-210ENST00000591115 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
PTPN2-210ENST00000591115 C8orf58Q8NAV2 365 aa12.67□□□□□ -0.38
PTPN2-210ENST00000591115 TRPC5Q9UL62 973 aaPredicted RBP12.67□□□□□ -0.38
PTPN2-210ENST00000591115 TNNQ9UQP3 1299 aa12.67□□□□□ -0.38
PTPN2-210ENST00000591115 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
PTPN2-210ENST00000591115 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
PTPN2-210ENST00000591115 DOT1LQ8TEK3 1739 aa12.66□□□□□ -0.38
PTPN2-210ENST00000591115 MAP3K5Q99683 1374 aa12.66□□□□□ -0.38
PTPN2-210ENST00000591115 PLEKHG2Q9H7P9 1386 aa12.66□□□□□ -0.38
PTPN2-210ENST00000591115 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
PTPN2-210ENST00000591115 RGS17Q9UGC6 210 aaPredicted RBP12.66□□□□□ -0.38
PTPN2-210ENST00000591115 ZNF772Q68DY9 489 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-210ENST00000591115 ZNF530Q6P9A1 599 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-210ENST00000591115 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
PTPN2-210ENST00000591115 API5Q9BZZ5 524 aaKnown RBP12.65□□□□□ -0.38
PTPN2-210ENST00000591115 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-210ENST00000591115 QTRT2Q9H974 415 aaKnown RBP12.65□□□□□ -0.38
PTPN2-210ENST00000591115 THRAP3Q9Y2W1 955 aaKnown RBP12.65□□□□□ -0.38
PTPN2-210ENST00000591115 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-210ENST00000591115 IGHDP01880 384 aa12.64□□□□□ -0.39
PTPN2-210ENST00000591115 PLEKHO1Q53GL0 409 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-210ENST00000591115 A0A0G2JS52 829 aa12.63□□□□□ -0.39
PTPN2-210ENST00000591115 MYT1Q01538 1121 aa12.63□□□□□ -0.39
PTPN2-210ENST00000591115 ITPRIPQ8IWB1 547 aa12.63□□□□□ -0.39
PTPN2-210ENST00000591115 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
PTPN2-210ENST00000591115 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
PTPN2-210ENST00000591115 PCDH11XQ9BZA7 1347 aa12.63□□□□□ -0.39
PTPN2-210ENST00000591115 PCDH11YQ9BZA8 1340 aa12.63□□□□□ -0.39
PTPN2-210ENST00000591115 KDM6AO15550 1401 aaPredicted RBP12.63□□□□□ -0.39
PTPN2-210ENST00000591115 CYP27B1O15528 508 aa12.62□□□□□ -0.39
PTPN2-210ENST00000591115 AMOTQ4VCS5 1084 aa12.62□□□□□ -0.39
PTPN2-210ENST00000591115 ZCRB1Q8TBF4 217 aaKnown RBP12.62□□□□□ -0.39
PTPN2-210ENST00000591115 ZBTB40Q9NUA8 1239 aa12.62□□□□□ -0.39
PTPN2-210ENST00000591115 TSPYL4Q9UJ04 414 aa12.62□□□□□ -0.39
PTPN2-210ENST00000591115 SPG7Q9UQ90 795 aa12.62□□□□□ -0.39
PTPN2-210ENST00000591115 ITGB4P16144 1822 aa12.62□□□□□ -0.39
PTPN2-210ENST00000591115 ABCC4O15439 1325 aa12.62□□□□□ -0.39
PTPN2-210ENST00000591115 KAT6BQ8WYB5 2073 aa12.62□□□□□ -0.39
PTPN2-210ENST00000591115 ELL2O00472 640 aaPredicted RBP12.62□□□□□ -0.39
PTPN2-210ENST00000591115 HDAC1Q13547 482 aaPredicted RBP12.62□□□□□ -0.39
PTPN2-210ENST00000591115 CDCA7Q9BWT1 371 aaPredicted RBP12.62□□□□□ -0.39
PTPN2-210ENST00000591115 BACH2Q9BYV9 841 aa12.62□□□□□ -0.39
PTPN2-210ENST00000591115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.62□□□□□ -0.391e-6■■■□□ 16.3
PTPN2-210ENST00000591115 CEMIPQ8WUJ3 1361 aa12.62□□□□□ -0.39
PTPN2-210ENST00000591115 PHKG2P15735 406 aa12.61□□□□□ -0.39
PTPN2-210ENST00000591115 PDE4AP27815 886 aa12.61□□□□□ -0.39
PTPN2-210ENST00000591115 TAF7Q15545 349 aaPredicted RBP12.61□□□□□ -0.39
PTPN2-210ENST00000591115 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
PTPN2-210ENST00000591115 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
PTPN2-210ENST00000591115 DDX54Q8TDD1 881 aaKnown RBP12.61□□□□□ -0.39
PTPN2-210ENST00000591115 PTPRCP08575 1304 aa12.61□□□□□ -0.39
PTPN2-210ENST00000591115 RGS12O14924 1447 aa12.61□□□□□ -0.39
PTPN2-210ENST00000591115 MRC1P22897 1456 aa12.6□□□□□ -0.39
PTPN2-210ENST00000591115 DDB1Q16531 1140 aa12.6□□□□□ -0.39
PTPN2-210ENST00000591115 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
PTPN2-210ENST00000591115 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
PTPN2-210ENST00000591115 AKAP4Q5JQC9 854 aa12.59□□□□□ -0.39
PTPN2-210ENST00000591115 MPRIPQ6WCQ1 1025 aa12.59□□□□□ -0.39
PTPN2-210ENST00000591115 SBF2Q86WG5 1849 aa12.59□□□□□ -0.39
PTPN2-210ENST00000591115 KDM3BQ7LBC6 1761 aa12.59□□□□□ -0.39
PTPN2-210ENST00000591115 EXOC5O00471 708 aa12.59□□□□□ -0.39
PTPN2-210ENST00000591115 CAPN15O75808 1086 aa12.59□□□□□ -0.39
PTPN2-210ENST00000591115 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
PTPN2-210ENST00000591115 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
PTPN2-210ENST00000591115 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
PTPN2-210ENST00000591115 CHMP4AQ9BY43 222 aa12.59□□□□□ -0.39
PTPN2-210ENST00000591115 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
PTPN2-210ENST00000591115 ZBTB7BO15156 539 aaPredicted RBP12.58□□□□□ -0.4
PTPN2-210ENST00000591115 INTS3Q68E01 1043 aaKnown RBP12.58□□□□□ -0.4
PTPN2-210ENST00000591115 LGR6Q9HBX8 967 aa12.58□□□□□ -0.4
PTPN2-210ENST00000591115 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms