RNA–Protein interactions for RNA: ENST00000591028.1

NFIX-213, Transcript of nuclear factor I X, humanhuman

TSL 3

Gene NFIX, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-213ENST00000591028 PELP1Q8IZL8 1130 aaKnown RBP21.21■□□□□ 0.99
NFIX-213ENST00000591028 SPG7Q9UQ90 795 aa21.21■□□□□ 0.99
NFIX-213ENST00000591028 WDR43Q15061 677 aaKnown RBP eCLIP21.2■□□□□ 0.98
NFIX-213ENST00000591028 GPR162Q16538 588 aa21.2■□□□□ 0.98
NFIX-213ENST00000591028 AMOTQ4VCS5 1084 aa21.2■□□□□ 0.98
NFIX-213ENST00000591028 SULT6B1Q6IMI4 303 aa21.2■□□□□ 0.98
NFIX-213ENST00000591028 CCER2I3L3R5 266 aa21.19■□□□□ 0.98
NFIX-213ENST00000591028 FCHSD2O94868 740 aa21.19■□□□□ 0.98
NFIX-213ENST00000591028 U2AF1L5P0DN76 240 aaPredicted RBP21.19■□□□□ 0.98
NFIX-213ENST00000591028 U2AF1Q01081 240 aaKnown RBP eCLIP21.19■□□□□ 0.98
NFIX-213ENST00000591028 PLEKHO1Q53GL0 409 aaPredicted RBP21.17■□□□□ 0.98
NFIX-213ENST00000591028 AMIGO3Q86WK7 504 aa21.15■□□□□ 0.98
NFIX-213ENST00000591028 MIER1Q8N108 512 aa21.15■□□□□ 0.98
NFIX-213ENST00000591028 PIGBQ92521 554 aa21.15■□□□□ 0.98
NFIX-213ENST00000591028 MRS2Q9HD23 443 aa21.15■□□□□ 0.98
NFIX-213ENST00000591028 SMIM5Q71RC9 77 aa21.14■□□□□ 0.97
NFIX-213ENST00000591028 HSP90AB1P08238 724 aaKnown RBP21.13■□□□□ 0.97
NFIX-213ENST00000591028 PHF14O94880 888 aa21.12■□□□□ 0.97
NFIX-213ENST00000591028 HMOX1P09601 288 aa21.12■□□□□ 0.97
NFIX-213ENST00000591028 NKX1-1Q15270 411 aaPredicted RBP21.12■□□□□ 0.97
NFIX-213ENST00000591028 SMARCC1Q92922 1105 aaPredicted RBP21.12■□□□□ 0.97
NFIX-213ENST00000591028 AK7Q96M32 723 aa21.12■□□□□ 0.97
NFIX-213ENST00000591028 YBX3P16989 372 aaKnown RBP eCLIP21.11■□□□□ 0.97
NFIX-213ENST00000591028 AEBP1Q8IUX7 1158 aa21.11■□□□□ 0.97
NFIX-213ENST00000591028 GAS2L2Q8NHY3 880 aa21.11■□□□□ 0.97
NFIX-213ENST00000591028 MAPK8IP3Q9UPT6 1336 aa21.1■□□□□ 0.97
NFIX-213ENST00000591028 C1orf141Q5JVX7 400 aa21.1■□□□□ 0.97
NFIX-213ENST00000591028 RSPH6AQ9H0K4 717 aa21.1■□□□□ 0.97
NFIX-213ENST00000591028 PHKG2P15735 406 aa21.09■□□□□ 0.97
NFIX-213ENST00000591028 IFNL2Q8IZJ0 200 aa21.09■□□□□ 0.97
NFIX-213ENST00000591028 LINC00116Q8NCU8 138 aa21.09■□□□□ 0.97
NFIX-213ENST00000591028 TMOD3Q9NYL9 352 aa21.09■□□□□ 0.97
NFIX-213ENST00000591028 PRKAR2BP31323 418 aa21.08■□□□□ 0.97
NFIX-213ENST00000591028 FLAD1Q8NFF5 587 aa21.08■□□□□ 0.97
NFIX-213ENST00000591028 ASAP1Q9ULH1 1129 aa21.08■□□□□ 0.97
NFIX-213ENST00000591028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.07■□□□□ 0.96
NFIX-213ENST00000591028 LOC102724428A0A0B4J2F2 783 aa21.07■□□□□ 0.96
NFIX-213ENST00000591028 SIK1P57059 783 aa21.07■□□□□ 0.96
NFIX-213ENST00000591028 ZNF530Q6P9A1 599 aaPredicted RBP21.07■□□□□ 0.96
NFIX-213ENST00000591028 ITPK1Q13572 414 aa21.06■□□□□ 0.96
NFIX-213ENST00000591028 COL5A3P25940 1745 aaPredicted RBP21.05■□□□□ 0.96
NFIX-213ENST00000591028 AKAP4Q5JQC9 854 aa21.04■□□□□ 0.96
NFIX-213ENST00000591028 DCAF5Q96JK2 942 aa21.04■□□□□ 0.96
NFIX-213ENST00000591028 GNPATO15228 680 aa21.03■□□□□ 0.96
NFIX-213ENST00000591028 RUNDC1Q96C34 613 aa21.03■□□□□ 0.96
NFIX-213ENST00000591028 ATG3Q9NT62 314 aa21.03■□□□□ 0.96
NFIX-213ENST00000591028 SSFA2P28290 1259 aa21.02■□□□□ 0.96
NFIX-213ENST00000591028 LMOD3Q0VAK6 560 aa21.02■□□□□ 0.96
NFIX-213ENST00000591028 PNISRQ8TF01 805 aaKnown RBP21.02■□□□□ 0.96
NFIX-213ENST00000591028 WWC3Q9ULE0 1092 aa21.02■□□□□ 0.96
NFIX-213ENST00000591028 CD2APQ9Y5K6 639 aa21.02■□□□□ 0.96
NFIX-213ENST00000591028 KDM6AO15550 1401 aaPredicted RBP21.02■□□□□ 0.96
NFIX-213ENST00000591028 ZNF831Q5JPB2 1677 aa21.02■□□□□ 0.95
NFIX-213ENST00000591028 HMGB2P26583 209 aaKnown RBP21.01■□□□□ 0.95
NFIX-213ENST00000591028 ATP6V1AP38606 617 aa21.01■□□□□ 0.95
NFIX-213ENST00000591028 C1QTNF8P60827 252 aa21.01■□□□□ 0.95
NFIX-213ENST00000591028 CCDC184Q52MB2 194 aa21.01■□□□□ 0.95
NFIX-213ENST00000591028 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
NFIX-213ENST00000591028 HTATSF1O43719 755 aaKnown RBP21■□□□□ 0.95
NFIX-213ENST00000591028 GRIN3BO60391 1043 aa21■□□□□ 0.95
NFIX-213ENST00000591028 RTF1Q92541 710 aaKnown RBP21■□□□□ 0.95
NFIX-213ENST00000591028 C4AP0C0L4 1744 aa21■□□□□ 0.95
NFIX-213ENST00000591028 CEP350Q5VT06 3117 aa21■□□□□ 0.95
NFIX-213ENST00000591028 SENP3-EIF4A1A0A087X0R7 540 aa20.99■□□□□ 0.95
NFIX-213ENST00000591028 GNAT3A8MTJ3 354 aa20.99■□□□□ 0.95
NFIX-213ENST00000591028 PLEKHF1Q96S99 279 aa20.99■□□□□ 0.95
NFIX-213ENST00000591028 KIAA1551Q9HCM1 1747 aa20.98■□□□□ 0.95
NFIX-213ENST00000591028 MYH14Q7Z406 1995 aaKnown RBP20.98■□□□□ 0.95
NFIX-213ENST00000591028 ERVV-2B6SEH9 535 aa20.98■□□□□ 0.95
NFIX-213ENST00000591028 GIGYF1O75420 1035 aaPredicted RBP20.98■□□□□ 0.95
NFIX-213ENST00000591028 NFE2L2Q16236 605 aa20.98■□□□□ 0.95
NFIX-213ENST00000591028 MTHFSDQ2M296 383 aaKnown RBP20.98■□□□□ 0.95
NFIX-213ENST00000591028 NGEFQ8N5V2 710 aa20.98■□□□□ 0.95
NFIX-213ENST00000591028 SLC4A9Q96Q91 983 aa20.98■□□□□ 0.95
NFIX-213ENST00000591028 KIF13BQ9NQT8 1826 aa20.97■□□□□ 0.95
NFIX-213ENST00000591028 CICQ96RK0 1608 aaPredicted RBP20.97■□□□□ 0.95
NFIX-213ENST00000591028 ATP10DQ9P241 1426 aa20.97■□□□□ 0.95
NFIX-213ENST00000591028 N4BP2Q86UW6 1770 aaPredicted RBP20.97■□□□□ 0.95
NFIX-213ENST00000591028 VIRMAQ69YN4 1812 aaKnown RBP20.97■□□□□ 0.95
NFIX-213ENST00000591028 SCN11AQ9UI33 1791 aa20.96■□□□□ 0.95
NFIX-213ENST00000591028 RBM42Q9BTD8 480 aaKnown RBP20.96■□□□□ 0.95
NFIX-213ENST00000591028 TJP1Q07157 1748 aa20.95■□□□□ 0.94
NFIX-213ENST00000591028 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
NFIX-213ENST00000591028 PHACTR3Q96KR7 559 aa20.95■□□□□ 0.94
NFIX-213ENST00000591028 MMP10P09238 476 aa20.93■□□□□ 0.94
NFIX-213ENST00000591028 TEFQ10587 303 aa20.92■□□□□ 0.94
NFIX-213ENST00000591028 FAM9BQ8IZU0 186 aa20.92■□□□□ 0.94
NFIX-213ENST00000591028 ADCY9O60503 1353 aa20.92■□□□□ 0.94
NFIX-213ENST00000591028 PXDNLA1KZ92 1463 aa20.91■□□□□ 0.94
NFIX-213ENST00000591028 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
NFIX-213ENST00000591028 CABP4P57796 275 aa20.91■□□□□ 0.94
NFIX-213ENST00000591028 CALD1Q05682 793 aaKnown RBP20.91■□□□□ 0.94
NFIX-213ENST00000591028 RTCBQ9Y3I0 505 aaKnown RBP20.91■□□□□ 0.94
NFIX-213ENST00000591028 CCDC146Q8IYE0 955 aa20.9■□□□□ 0.94
NFIX-213ENST00000591028 MRC1P22897 1456 aa20.89■□□□□ 0.94
NFIX-213ENST00000591028 CEMIPQ8WUJ3 1361 aa20.89■□□□□ 0.93
NFIX-213ENST00000591028 CNTNAP4Q9C0A0 1308 aa20.89■□□□□ 0.93
NFIX-213ENST00000591028 RNMTO43148 476 aaKnown RBP20.89■□□□□ 0.93
NFIX-213ENST00000591028 RIPK4P57078 832 aa20.89■□□□□ 0.93
NFIX-213ENST00000591028 BRCA1P38398 1863 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms