RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TGFB2P61812 414 aa24.17■■□□□ 1.46
RETREG3-210ENST00000590541 CARD14Q9BXL6 1004 aa24.17■■□□□ 1.46
RETREG3-210ENST00000590541 EYA1Q99502 592 aa24.16■■□□□ 1.46
RETREG3-210ENST00000590541 ATG3Q9NT62 314 aa24.16■■□□□ 1.46
RETREG3-210ENST00000590541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.16■■□□□ 1.46
RETREG3-210ENST00000590541 PHKG2P15735 406 aa24.15■■□□□ 1.46
RETREG3-210ENST00000590541 BCS1LQ9Y276 419 aa24.15■■□□□ 1.46
RETREG3-210ENST00000590541 ANKRD26Q9UPS8 1709 aa24.15■■□□□ 1.46
RETREG3-210ENST00000590541 A0A0G2JLW4 131 aa24.14■■□□□ 1.45
RETREG3-210ENST00000590541 PPM1GO15355 546 aaPredicted RBP24.14■■□□□ 1.45
RETREG3-210ENST00000590541 C10orf71Q711Q0 1435 aa24.14■■□□□ 1.45
RETREG3-210ENST00000590541 WASHC2AQ641Q2 1341 aa24.13■■□□□ 1.45
RETREG3-210ENST00000590541 IFNL2Q8IZJ0 200 aa24.13■■□□□ 1.45
RETREG3-210ENST00000590541 NMRK2Q9NPI5 230 aa24.13■■□□□ 1.45
RETREG3-210ENST00000590541 KDRP35968 1356 aa24.13■■□□□ 1.45
RETREG3-210ENST00000590541 TRAPPC3LQ5T215 181 aa24.12■■□□□ 1.45
RETREG3-210ENST00000590541 NLGN1Q8N2Q7 840 aa24.12■■□□□ 1.45
RETREG3-210ENST00000590541 SLC4A9Q96Q91 983 aa24.12■■□□□ 1.45
RETREG3-210ENST00000590541 ARHGAP27Q6ZUM4 889 aa24.11■■□□□ 1.45
RETREG3-210ENST00000590541 RTCBQ9Y3I0 505 aaKnown RBP24.11■■□□□ 1.45
RETREG3-210ENST00000590541 DPEP1P16444 411 aa24.09■■□□□ 1.45
RETREG3-210ENST00000590541 CDCA8Q53HL2 280 aa24.09■■□□□ 1.45
RETREG3-210ENST00000590541 ARHGEF1Q92888 912 aaKnown RBP24.09■■□□□ 1.45
RETREG3-210ENST00000590541 C4AP0C0L4 1744 aa24.08■■□□□ 1.45
RETREG3-210ENST00000590541 BRCA1P38398 1863 aaKnown RBP24.08■■□□□ 1.45
RETREG3-210ENST00000590541 FCHSD2O94868 740 aa24.07■■□□□ 1.44
RETREG3-210ENST00000590541 GYS1P13807 737 aa24.07■■□□□ 1.44
RETREG3-210ENST00000590541 CCDC87Q9NVE4 849 aa24.07■■□□□ 1.44
RETREG3-210ENST00000590541 ZNF831Q5JPB2 1677 aa24.07■■□□□ 1.44
RETREG3-210ENST00000590541 ADRA2BP18089 450 aa24.06■■□□□ 1.44
RETREG3-210ENST00000590541 KCNA3P22001 575 aa24.06■■□□□ 1.44
RETREG3-210ENST00000590541 RC3H1Q5TC82 1133 aaKnown RBP24.06■■□□□ 1.44
RETREG3-210ENST00000590541 POLKQ9UBT6 870 aa24.06■■□□□ 1.44
RETREG3-210ENST00000590541 WDR90Q96KV7 1748 aa24.06■■□□□ 1.44
RETREG3-210ENST00000590541 COL5A3P25940 1745 aaPredicted RBP24.05■■□□□ 1.44
RETREG3-210ENST00000590541 RBM46Q8TBY0 533 aaKnown RBP24.05■■□□□ 1.44
RETREG3-210ENST00000590541 RBM42Q9BTD8 480 aaKnown RBP24.05■■□□□ 1.44
RETREG3-210ENST00000590541 C9orf131Q5VYM1 1079 aa24.04■■□□□ 1.44
RETREG3-210ENST00000590541 CNTNAP4Q9C0A0 1308 aa24.04■■□□□ 1.44
RETREG3-210ENST00000590541 RPS6KA4O75676 772 aa24.03■■□□□ 1.44
RETREG3-210ENST00000590541 PARP3Q9Y6F1 533 aa24.03■■□□□ 1.44
RETREG3-210ENST00000590541 PLEKHG2Q9H7P9 1386 aa24.03■■□□□ 1.44
RETREG3-210ENST00000590541 ERVV-2B6SEH9 535 aa24.02■■□□□ 1.44
RETREG3-210ENST00000590541 RFC4P35249 363 aa24.02■■□□□ 1.44
RETREG3-210ENST00000590541 HTRA3P83110 453 aa24.02■■□□□ 1.44
RETREG3-210ENST00000590541 EIF4A2Q14240 407 aaKnown RBP24.02■■□□□ 1.44
RETREG3-210ENST00000590541 ARFGEF1Q9Y6D6 1849 aa24.01■■□□□ 1.43
RETREG3-210ENST00000590541 KLRG1Q96E93 195 aa24■■□□□ 1.43
RETREG3-210ENST00000590541 MYH14Q7Z406 1995 aaKnown RBP23.99■■□□□ 1.43
RETREG3-210ENST00000590541 KCPQ6ZWJ8 1503 aa23.99■■□□□ 1.43
RETREG3-210ENST00000590541 JMYQ8N9B5 988 aa23.98■■□□□ 1.43
RETREG3-210ENST00000590541 DCAF5Q96JK2 942 aa23.98■■□□□ 1.43
RETREG3-210ENST00000590541 PIM2Q9P1W9 311 aa23.98■■□□□ 1.43
RETREG3-210ENST00000590541 CLSPNQ9HAW4 1339 aa23.98■■□□□ 1.43
RETREG3-210ENST00000590541 KDM6AO15550 1401 aaPredicted RBP23.97■■□□□ 1.43
RETREG3-210ENST00000590541 FSTL1Q12841 308 aa23.97■■□□□ 1.43
RETREG3-210ENST00000590541 COL13A1Q5TAT6 717 aaPredicted RBP23.97■■□□□ 1.43
RETREG3-210ENST00000590541 C16orf71Q8IYS4 520 aaPredicted RBP23.97■■□□□ 1.43
RETREG3-210ENST00000590541 HSP90AB1P08238 724 aaKnown RBP23.96■■□□□ 1.43
RETREG3-210ENST00000590541 TIMELESSQ9UNS1 1208 aa23.96■■□□□ 1.43
RETREG3-210ENST00000590541 SRP68Q9UHB9 627 aaKnown RBP23.95■■□□□ 1.42
RETREG3-210ENST00000590541 KDM2BQ8NHM5 1336 aa23.94■■□□□ 1.42
RETREG3-210ENST00000590541 DDR1Q08345 913 aa23.94■■□□□ 1.42
RETREG3-210ENST00000590541 FKBP8Q14318 412 aa23.94■■□□□ 1.42
RETREG3-210ENST00000590541 DALRD3Q5D0E6 543 aaKnown RBP23.94■■□□□ 1.42
RETREG3-210ENST00000590541 RNF181Q9P0P0 153 aa23.94■■□□□ 1.42
RETREG3-210ENST00000590541 TNNT2P45379 298 aaPredicted RBP23.93■■□□□ 1.42
RETREG3-210ENST00000590541 CRKLP46109 303 aaKnown RBP23.93■■□□□ 1.42
RETREG3-210ENST00000590541 CABP4P57796 275 aa23.93■■□□□ 1.42
RETREG3-210ENST00000590541 RRAGCQ9HB90 399 aa23.93■■□□□ 1.42
RETREG3-210ENST00000590541 USP42Q9H9J4 1324 aaKnown RBP23.92■■□□□ 1.42
RETREG3-210ENST00000590541 PTCD1O75127 700 aaKnown RBP23.92■■□□□ 1.42
RETREG3-210ENST00000590541 CHRNA5P30532 468 aa23.92■■□□□ 1.42
RETREG3-210ENST00000590541 PLEKHO1Q53GL0 409 aaPredicted RBP23.92■■□□□ 1.42
RETREG3-210ENST00000590541 ZNF530Q6P9A1 599 aaPredicted RBP23.91■■□□□ 1.42
RETREG3-210ENST00000590541 TNRC6CQ9HCJ0 1690 aaKnown RBP23.89■■□□□ 1.42
RETREG3-210ENST00000590541 TJP1Q07157 1748 aa23.89■■□□□ 1.41
RETREG3-210ENST00000590541 SBF1O95248 1867 aa23.89■■□□□ 1.41
RETREG3-210ENST00000590541 POLRMTO00411 1230 aaKnown RBP23.88■■□□□ 1.41
RETREG3-210ENST00000590541 AMOTQ4VCS5 1084 aa23.88■■□□□ 1.41
RETREG3-210ENST00000590541 ADAMTS7Q9UKP4 1686 aa23.88■■□□□ 1.41
RETREG3-210ENST00000590541 TM4SF1P30408 202 aa23.87■■□□□ 1.41
RETREG3-210ENST00000590541 MTHFSP49914 203 aa23.87■■□□□ 1.41
RETREG3-210ENST00000590541 NFATC2IPQ8NCF5 419 aa23.87■■□□□ 1.41
RETREG3-210ENST00000590541 INTS5Q6P9B9 1019 aaKnown RBP23.86■■□□□ 1.41
RETREG3-210ENST00000590541 AEBP1Q8IUX7 1158 aa23.85■■□□□ 1.41
RETREG3-210ENST00000590541 SMC1BQ8NDV3 1235 aa23.85■■□□□ 1.41
RETREG3-210ENST00000590541 CAPN15O75808 1086 aa23.83■■□□□ 1.41
RETREG3-210ENST00000590541 RASSF7Q02833 373 aa23.83■■□□□ 1.41
RETREG3-210ENST00000590541 C1orf141Q5JVX7 400 aa23.83■■□□□ 1.41
RETREG3-210ENST00000590541 PCGF6Q9BYE7 350 aa23.83■■□□□ 1.41
RETREG3-210ENST00000590541 PRELPP51888 382 aa23.82■■□□□ 1.4
RETREG3-210ENST00000590541 USPL1Q5W0Q7 1092 aa23.82■■□□□ 1.4
RETREG3-210ENST00000590541 TNS4Q8IZW8 715 aa23.82■■□□□ 1.4
RETREG3-210ENST00000590541 ZC3H4Q9UPT8 1303 aaKnown RBP23.81■■□□□ 1.4
RETREG3-210ENST00000590541 POLR3GLQ9BT43 218 aa23.8■■□□□ 1.4
RETREG3-210ENST00000590541 PCNTO95613 3336 aa23.79■■□□□ 1.4
RETREG3-210ENST00000590541 ZPR1O75312 459 aa23.79■■□□□ 1.4
RETREG3-210ENST00000590541 DNAJC10Q8IXB1 793 aa23.79■■□□□ 1.4
RETREG3-210ENST00000590541 SOS1Q07889 1333 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms