RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 HSPA6P17066 643 aa20.92■□□□□ 0.94
GHDC-211ENST00000590520 ITPK1Q13572 414 aa20.92■□□□□ 0.94
GHDC-211ENST00000590520 IFNL2Q8IZJ0 200 aa20.92■□□□□ 0.94
GHDC-211ENST00000590520 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
GHDC-211ENST00000590520 PXDNLA1KZ92 1463 aa20.92■□□□□ 0.94
GHDC-211ENST00000590520 ATP6V1AP38606 617 aa20.91■□□□□ 0.94
GHDC-211ENST00000590520 N4BP2Q86UW6 1770 aaPredicted RBP20.91■□□□□ 0.94
GHDC-211ENST00000590520 C10orf71Q711Q0 1435 aa20.89■□□□□ 0.94
GHDC-211ENST00000590520 MMP10P09238 476 aa20.89■□□□□ 0.93
GHDC-211ENST00000590520 ATG3Q9NT62 314 aa20.89■□□□□ 0.93
GHDC-211ENST00000590520 BRCA1P38398 1863 aaKnown RBP20.89■□□□□ 0.93
GHDC-211ENST00000590520 C4AP0C0L4 1744 aa20.89■□□□□ 0.93
GHDC-211ENST00000590520 POLKQ9UBT6 870 aa20.88■□□□□ 0.93
GHDC-211ENST00000590520 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
GHDC-211ENST00000590520 KIF3CO14782 793 aa20.85■□□□□ 0.93
GHDC-211ENST00000590520 RTCBQ9Y3I0 505 aaKnown RBP20.85■□□□□ 0.93
GHDC-211ENST00000590520 ADRA2BP18089 450 aa20.84■□□□□ 0.93
GHDC-211ENST00000590520 ARFGEF1Q9Y6D6 1849 aa20.83■□□□□ 0.93
GHDC-211ENST00000590520 CNTNAP4Q9C0A0 1308 aa20.83■□□□□ 0.93
GHDC-211ENST00000590520 MYH14Q7Z406 1995 aaKnown RBP20.83■□□□□ 0.93
GHDC-211ENST00000590520 TGFB2P61812 414 aa20.83■□□□□ 0.93
GHDC-211ENST00000590520 TRAPPC3LQ5T215 181 aa20.83■□□□□ 0.93
GHDC-211ENST00000590520 ERVV-2B6SEH9 535 aa20.82■□□□□ 0.92
GHDC-211ENST00000590520 HSP90AB1P08238 724 aaKnown RBP20.82■□□□□ 0.92
GHDC-211ENST00000590520 NLGN1Q8N2Q7 840 aa20.82■□□□□ 0.92
GHDC-211ENST00000590520 KDM6AO15550 1401 aaPredicted RBP20.81■□□□□ 0.92
GHDC-211ENST00000590520 RC3H1Q5TC82 1133 aaKnown RBP20.81■□□□□ 0.92
GHDC-211ENST00000590520 DCAF5Q96JK2 942 aa20.81■□□□□ 0.92
GHDC-211ENST00000590520 CCDC87Q9NVE4 849 aa20.81■□□□□ 0.92
GHDC-211ENST00000590520 BCS1LQ9Y276 419 aa20.81■□□□□ 0.92
GHDC-211ENST00000590520 SLC4A9Q96Q91 983 aa20.8■□□□□ 0.92
GHDC-211ENST00000590520 RBM42Q9BTD8 480 aaKnown RBP20.8■□□□□ 0.92
GHDC-211ENST00000590520 TNNT2P45379 298 aaPredicted RBP20.79■□□□□ 0.92
GHDC-211ENST00000590520 TJP1Q07157 1748 aa20.78■□□□□ 0.92
GHDC-211ENST00000590520 GYS1P13807 737 aa20.78■□□□□ 0.92
GHDC-211ENST00000590520 ARHGEF1Q92888 912 aaKnown RBP20.78■□□□□ 0.92
GHDC-211ENST00000590520 TIMELESSQ9UNS1 1208 aa20.78■□□□□ 0.92
GHDC-211ENST00000590520 A0A0G2JLW4 131 aa20.77■□□□□ 0.92
GHDC-211ENST00000590520 RFC4P35249 363 aa20.77■□□□□ 0.92
GHDC-211ENST00000590520 PLEKHO1Q53GL0 409 aaPredicted RBP20.77■□□□□ 0.92
GHDC-211ENST00000590520 ZNF530Q6P9A1 599 aaPredicted RBP20.77■□□□□ 0.92
GHDC-211ENST00000590520 RPS6KA4O75676 772 aa20.76■□□□□ 0.91
GHDC-211ENST00000590520 APLP1P51693 650 aa20.76■□□□□ 0.91
GHDC-211ENST00000590520 AMOTQ4VCS5 1084 aa20.76■□□□□ 0.91
GHDC-211ENST00000590520 POLR3GLQ9BT43 218 aa20.76■□□□□ 0.91
GHDC-211ENST00000590520 PARP3Q9Y6F1 533 aa20.76■□□□□ 0.91
GHDC-211ENST00000590520 SCN11AQ9UI33 1791 aa20.75■□□□□ 0.91
GHDC-211ENST00000590520 TOMM70O94826 608 aa20.75■□□□□ 0.91
GHDC-211ENST00000590520 DPEP1P16444 411 aa20.75■□□□□ 0.91
GHDC-211ENST00000590520 CABP4P57796 275 aa20.75■□□□□ 0.91
GHDC-211ENST00000590520 FCHSD2O94868 740 aa20.74■□□□□ 0.91
GHDC-211ENST00000590520 ARHGAP27Q6ZUM4 889 aa20.74■□□□□ 0.91
GHDC-211ENST00000590520 WDR90Q96KV7 1748 aa20.74■□□□□ 0.91
GHDC-211ENST00000590520 C1orf141Q5JVX7 400 aa20.72■□□□□ 0.91
GHDC-211ENST00000590520 ADAMTS7Q9UKP4 1686 aa20.72■□□□□ 0.91
GHDC-211ENST00000590520 TRIM26Q12899 539 aaPredicted RBP20.71■□□□□ 0.91
GHDC-211ENST00000590520 USP42Q9H9J4 1324 aaKnown RBP20.71■□□□□ 0.91
GHDC-211ENST00000590520 TNRC6CQ9HCJ0 1690 aaKnown RBP20.7■□□□□ 0.91
GHDC-211ENST00000590520 CRKLP46109 303 aaKnown RBP20.7■□□□□ 0.9
GHDC-211ENST00000590520 MTHFSP49914 203 aa20.7■□□□□ 0.9
GHDC-211ENST00000590520 NMRK2Q9NPI5 230 aa20.7■□□□□ 0.9
GHDC-211ENST00000590520 VIRMAQ69YN4 1812 aaKnown RBP20.69■□□□□ 0.9
GHDC-211ENST00000590520 PTCD1O75127 700 aaKnown RBP20.69■□□□□ 0.9
GHDC-211ENST00000590520 AEBP1Q8IUX7 1158 aa20.69■□□□□ 0.9
GHDC-211ENST00000590520 KCNA3P22001 575 aa20.68■□□□□ 0.9
GHDC-211ENST00000590520 C9orf131Q5VYM1 1079 aa20.68■□□□□ 0.9
GHDC-211ENST00000590520 PIM2Q9P1W9 311 aa20.68■□□□□ 0.9
GHDC-211ENST00000590520 CLSPNQ9HAW4 1339 aa20.68■□□□□ 0.9
GHDC-211ENST00000590520 SBF1O95248 1867 aa20.68■□□□□ 0.9
GHDC-211ENST00000590520 DDR1Q08345 913 aa20.67■□□□□ 0.9
GHDC-211ENST00000590520 RBM46Q8TBY0 533 aaKnown RBP20.67■□□□□ 0.9
GHDC-211ENST00000590520 PANK3Q9H999 370 aa20.67■□□□□ 0.9
GHDC-211ENST00000590520 SRP68Q9UHB9 627 aaKnown RBP20.67■□□□□ 0.9
GHDC-211ENST00000590520 MRC1P22897 1456 aa20.67■□□□□ 0.9
GHDC-211ENST00000590520 FKBP8Q14318 412 aa20.66■□□□□ 0.9
GHDC-211ENST00000590520 DALRD3Q5D0E6 543 aaKnown RBP20.66■□□□□ 0.9
GHDC-211ENST00000590520 KCPQ6ZWJ8 1503 aa20.66■□□□□ 0.9
GHDC-211ENST00000590520 AFDNP55196 1824 aaKnown RBP20.65■□□□□ 0.9
GHDC-211ENST00000590520 DLEC1Q9Y238 1755 aa20.65■□□□□ 0.9
GHDC-211ENST00000590520 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
GHDC-211ENST00000590520 NFATC2IPQ8NCF5 419 aa20.65■□□□□ 0.9
GHDC-211ENST00000590520 KDM2BQ8NHM5 1336 aa20.64■□□□□ 0.89
GHDC-211ENST00000590520 EIF4G2P78344 907 aaKnown RBP eCLIP20.64■□□□□ 0.89
GHDC-211ENST00000590520 SULT6B1Q6IMI4 303 aa20.64■□□□□ 0.89
GHDC-211ENST00000590520 MORC1Q86VD1 984 aa20.64■□□□□ 0.89
GHDC-211ENST00000590520 NRXN2Q9P2S2 1712 aa20.64■□□□□ 0.89
GHDC-211ENST00000590520 DNAJC5GQ8N7S2 189 aa20.63■□□□□ 0.89
GHDC-211ENST00000590520 RNF181Q9P0P0 153 aa20.63■□□□□ 0.89
GHDC-211ENST00000590520 POLRMTO00411 1230 aaKnown RBP20.62■□□□□ 0.89
GHDC-211ENST00000590520 HSPA5P11021 654 aaKnown RBP20.61■□□□□ 0.89
GHDC-211ENST00000590520 FSTL1Q12841 308 aa20.61■□□□□ 0.89
GHDC-211ENST00000590520 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
GHDC-211ENST00000590520 SOS1Q07889 1333 aaPredicted RBP20.6■□□□□ 0.89
GHDC-211ENST00000590520 ZPR1O75312 459 aa20.6■□□□□ 0.89
GHDC-211ENST00000590520 CHRNA5P30532 468 aa20.6■□□□□ 0.89
GHDC-211ENST00000590520 AKAP4Q5JQC9 854 aa20.6■□□□□ 0.89
GHDC-211ENST00000590520 TIAM2Q8IVF5 1701 aa20.6■□□□□ 0.89
GHDC-211ENST00000590520 PCNTO95613 3336 aa20.6■□□□□ 0.89
GHDC-211ENST00000590520 UBR2Q8IWV8 1755 aa20.59■□□□□ 0.89
GHDC-211ENST00000590520 IL13P35225 146 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms