RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 SULT6B1Q6IMI4 303 aa10.3□□□□□ -0.76
NPC1-208ENST00000590301 ATG3Q9NT62 314 aa10.3□□□□□ -0.76
NPC1-208ENST00000590301 ASAP1Q9ULH1 1129 aa10.3□□□□□ -0.76
NPC1-208ENST00000590301 LY75O60449 1722 aa10.3□□□□□ -0.76
NPC1-208ENST00000590301 RGPD2P0DJD1 1756 aa10.29□□□□□ -0.76
NPC1-208ENST00000590301 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.29□□□□□ -0.76
NPC1-208ENST00000590301 ATP6V1AP38606 617 aa10.29□□□□□ -0.76
NPC1-208ENST00000590301 MTHFSP49914 203 aa10.29□□□□□ -0.76
NPC1-208ENST00000590301 CABP4P57796 275 aa10.29□□□□□ -0.76
NPC1-208ENST00000590301 AEBP1Q8IUX7 1158 aa10.29□□□□□ -0.76
NPC1-208ENST00000590301 QSER1Q2KHR3 1735 aa10.29□□□□□ -0.76
NPC1-208ENST00000590301 GPR162Q16538 588 aa10.28□□□□□ -0.76
NPC1-208ENST00000590301 RC3H1Q5TC82 1133 aaKnown RBP10.28□□□□□ -0.76
NPC1-208ENST00000590301 LINC00116Q8NCU8 138 aa10.28□□□□□ -0.76
NPC1-208ENST00000590301 CD2APQ9Y5K6 639 aa10.28□□□□□ -0.76
NPC1-208ENST00000590301 KDM6AO15550 1401 aaPredicted RBP10.27□□□□□ -0.77
NPC1-208ENST00000590301 GNPATO15228 680 aa10.27□□□□□ -0.77
NPC1-208ENST00000590301 DIAPH1O60610 1272 aaKnown RBP10.27□□□□□ -0.77
NPC1-208ENST00000590301 ITPK1Q13572 414 aa10.27□□□□□ -0.77
NPC1-208ENST00000590301 AKAP4Q5JQC9 854 aa10.27□□□□□ -0.77
NPC1-208ENST00000590301 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
NPC1-208ENST00000590301 GRIN3BO60391 1043 aa10.26□□□□□ -0.77
NPC1-208ENST00000590301 PHF14O94880 888 aa10.26□□□□□ -0.77
NPC1-208ENST00000590301 CC2D1BQ5T0F9 858 aaKnown RBP10.26□□□□□ -0.77
NPC1-208ENST00000590301 MSL1Q68DK7 614 aa10.26□□□□□ -0.77
NPC1-208ENST00000590301 RTCBQ9Y3I0 505 aaKnown RBP10.26□□□□□ -0.77
NPC1-208ENST00000590301 TOGARAM1Q9Y4F4 1720 aa10.26□□□□□ -0.77
NPC1-208ENST00000590301 CNTNAP4Q9C0A0 1308 aa10.26□□□□□ -0.77
NPC1-208ENST00000590301 RBM42Q9BTD8 480 aaKnown RBP10.25□□□□□ -0.77
NPC1-208ENST00000590301 C5P01031 1676 aa10.25□□□□□ -0.77
NPC1-208ENST00000590301 C4BP0C0L5 1744 aa10.24□□□□□ -0.77
NPC1-208ENST00000590301 TRAPPC3LQ5T215 181 aa10.24□□□□□ -0.77
NPC1-208ENST00000590301 AMIGO3Q86WK7 504 aa10.24□□□□□ -0.77
NPC1-208ENST00000590301 NLGN1Q8N2Q7 840 aa10.24□□□□□ -0.77
NPC1-208ENST00000590301 NFATC2IPQ8NCF5 419 aa10.24□□□□□ -0.77
NPC1-208ENST00000590301 NLGN2Q8NFZ4 835 aa10.24□□□□□ -0.77
NPC1-208ENST00000590301 SLC4A9Q96Q91 983 aa10.24□□□□□ -0.77
NPC1-208ENST00000590301 U3KPZ7 1027 aaPredicted RBP10.24□□□□□ -0.77
NPC1-208ENST00000590301 COL24A1Q17RW2 1714 aa10.24□□□□□ -0.77
NPC1-208ENST00000590301 RPS6KA4O75676 772 aa10.23□□□□□ -0.77
NPC1-208ENST00000590301 MYCNP04198 464 aaPredicted RBP10.23□□□□□ -0.77
NPC1-208ENST00000590301 CFAP53Q96M91 514 aa10.23□□□□□ -0.77
NPC1-208ENST00000590301 SLC52A2Q9HAB3 445 aa10.23□□□□□ -0.77
NPC1-208ENST00000590301 MAP2P11137 1827 aaKnown RBP10.23□□□□□ -0.77
NPC1-208ENST00000590301 PTCD1O75127 700 aaKnown RBP10.22□□□□□ -0.77
NPC1-208ENST00000590301 HMOX1P09601 288 aa10.22□□□□□ -0.77
NPC1-208ENST00000590301 PELP1Q8IZL8 1130 aaKnown RBP10.22□□□□□ -0.77
NPC1-208ENST00000590301 ZNF784Q8NCA9 323 aaPredicted RBP10.22□□□□□ -0.77
NPC1-208ENST00000590301 RNMTO43148 476 aaKnown RBP10.21□□□□□ -0.77
NPC1-208ENST00000590301 MMP10P09238 476 aa10.21□□□□□ -0.77
NPC1-208ENST00000590301 RFC4P35249 363 aa10.21□□□□□ -0.77
NPC1-208ENST00000590301 MTHFSDQ2M296 383 aaKnown RBP10.21□□□□□ -0.77
NPC1-208ENST00000590301 GAS2L2Q8NHY3 880 aa10.21□□□□□ -0.77
NPC1-208ENST00000590301 ZNF831Q5JPB2 1677 aa10.21□□□□□ -0.78
NPC1-208ENST00000590301 U2SURPO15042 1029 aaKnown RBP10.2□□□□□ -0.78
NPC1-208ENST00000590301 COL3A1P02461 1466 aaPredicted RBP10.2□□□□□ -0.78
NPC1-208ENST00000590301 MRC1P22897 1456 aa10.2□□□□□ -0.78
NPC1-208ENST00000590301 CRKLP46109 303 aaKnown RBP10.2□□□□□ -0.78
NPC1-208ENST00000590301 VSIG10Q8N0Z9 540 aa10.2□□□□□ -0.78
NPC1-208ENST00000590301 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
NPC1-208ENST00000590301 NUDCQ9Y266 331 aa10.2□□□□□ -0.78
NPC1-208ENST00000590301 GYS1P13807 737 aa10.19□□□□□ -0.78
NPC1-208ENST00000590301 YBX3P16989 372 aaKnown RBP eCLIP10.19□□□□□ -0.78
NPC1-208ENST00000590301 TGFB2P61812 414 aa10.19□□□□□ -0.78
NPC1-208ENST00000590301 SMIM5Q71RC9 77 aa10.19□□□□□ -0.78
NPC1-208ENST00000590301 LGR6Q9HBX8 967 aa10.19□□□□□ -0.78
NPC1-208ENST00000590301 CCDC87Q9NVE4 849 aa10.19□□□□□ -0.78
NPC1-208ENST00000590301 ITGB4P16144 1822 aa10.19□□□□□ -0.78
NPC1-208ENST00000590301 TUBGCP6Q96RT7 1819 aa10.19□□□□□ -0.78
NPC1-208ENST00000590301 KAT6BQ8WYB5 2073 aa10.18□□□□□ -0.78
NPC1-208ENST00000590301 GNAT3A8MTJ3 354 aa10.18□□□□□ -0.78
NPC1-208ENST00000590301 CAPN15O75808 1086 aa10.18□□□□□ -0.78
NPC1-208ENST00000590301 TEFQ10587 303 aa10.18□□□□□ -0.78
NPC1-208ENST00000590301 TTC5Q8N0Z6 440 aa10.18□□□□□ -0.78
NPC1-208ENST00000590301 PARP3Q9Y6F1 533 aa10.18□□□□□ -0.78
NPC1-208ENST00000590301 UTRNP46939 3433 aa10.18□□□□□ -0.78
NPC1-208ENST00000590301 USP42Q9H9J4 1324 aaKnown RBP10.17□□□□□ -0.78
NPC1-208ENST00000590301 CYP19A1P11511 503 aaPredicted RBP10.17□□□□□ -0.78
NPC1-208ENST00000590301 PPP2R1AP30153 589 aa10.17□□□□□ -0.78
NPC1-208ENST00000590301 INTS5Q6P9B9 1019 aaKnown RBP10.17□□□□□ -0.78
NPC1-208ENST00000590301 TEX13AQ9BXU3 409 aaPredicted RBP10.17□□□□□ -0.78
NPC1-208ENST00000590301 TAF1LQ8IZX4 1826 aa10.17□□□□□ -0.78
NPC1-208ENST00000590301 C10orf71Q711Q0 1435 aa10.16□□□□□ -0.78
NPC1-208ENST00000590301 CICQ96RK0 1608 aaPredicted RBP10.16□□□□□ -0.78
NPC1-208ENST00000590301 FCHSD2O94868 740 aa10.16□□□□□ -0.78
NPC1-208ENST00000590301 STARD3NLO95772 234 aa10.16□□□□□ -0.78
NPC1-208ENST00000590301 CNGB1Q14028 1251 aaPredicted RBP10.16□□□□□ -0.78
NPC1-208ENST00000590301 DNAJC10Q8IXB1 793 aa10.16□□□□□ -0.78
NPC1-208ENST00000590301 RSPH6AQ9H0K4 717 aa10.16□□□□□ -0.78
NPC1-208ENST00000590301 UBR3Q6ZT12 1888 aa10.15□□□□□ -0.78
NPC1-208ENST00000590301 SOS1Q07889 1333 aaPredicted RBP10.15□□□□□ -0.78
NPC1-208ENST00000590301 ZPR1O75312 459 aa10.15□□□□□ -0.78
NPC1-208ENST00000590301 PRKAR2BP31323 418 aa10.15□□□□□ -0.78
NPC1-208ENST00000590301 SLC39A6Q13433 755 aa10.15□□□□□ -0.78
NPC1-208ENST00000590301 CEMIPQ8WUJ3 1361 aa10.14□□□□□ -0.79
NPC1-208ENST00000590301 KCPQ6ZWJ8 1503 aa10.14□□□□□ -0.79
NPC1-208ENST00000590301 A0A087WZG4 1122 aa10.14□□□□□ -0.79
NPC1-208ENST00000590301 HTATSF1O43719 755 aaKnown RBP10.14□□□□□ -0.79
NPC1-208ENST00000590301 SLC4A2P04920 1241 aa10.14□□□□□ -0.79
NPC1-208ENST00000590301 U2AF1L5P0DN76 240 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms