RNA–Protein interactions for RNA: ENST00000590220.1

PIK3C3-213, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-213ENST00000590220 LBX1P52954 281 aa8.28□□□□□ -1.08
PIK3C3-213ENST00000590220 NLGN1Q8N2Q7 840 aa8.28□□□□□ -1.08
PIK3C3-213ENST00000590220 SMARCC1Q92922 1105 aaPredicted RBP8.28□□□□□ -1.08
PIK3C3-213ENST00000590220 PIM2Q9P1W9 311 aa8.28□□□□□ -1.08
PIK3C3-213ENST00000590220 MKRN1Q9UHC7 482 aaKnown RBP8.28□□□□□ -1.08
PIK3C3-213ENST00000590220 CASP8AP2Q9UKL3 1982 aa8.28□□□□□ -1.08
PIK3C3-213ENST00000590220 KTN1Q86UP2 1357 aaKnown RBP8.27□□□□□ -1.09
PIK3C3-213ENST00000590220 PHF14O94880 888 aa8.27□□□□□ -1.09
PIK3C3-213ENST00000590220 HSPA8P11142 646 aaKnown RBP8.27□□□□□ -1.09
PIK3C3-213ENST00000590220 AIDAQ96BJ3 306 aa8.27□□□□□ -1.09
PIK3C3-213ENST00000590220 CCDC87Q9NVE4 849 aa8.27□□□□□ -1.09
PIK3C3-213ENST00000590220 CD163L1Q9NR16 1453 aa8.26□□□□□ -1.09
PIK3C3-213ENST00000590220 NRXN2Q9P2S2 1712 aa8.26□□□□□ -1.09
PIK3C3-213ENST00000590220 SBNO2Q9Y2G9 1366 aa8.26□□□□□ -1.09
PIK3C3-213ENST00000590220 ADAMTSL1Q8N6G6 1762 aa8.26□□□□□ -1.09
PIK3C3-213ENST00000590220 NBPF1Q3BBV0 1214 aa8.26□□□□□ -1.09
PIK3C3-213ENST00000590220 DALRD3Q5D0E6 543 aaKnown RBP8.26□□□□□ -1.09
PIK3C3-213ENST00000590220 LINC00116Q8NCU8 138 aa8.26□□□□□ -1.09
PIK3C3-213ENST00000590220 EVC2Q86UK5 1308 aa8.26□□□□□ -1.09
PIK3C3-213ENST00000590220 PASKQ96RG2 1323 aa8.26□□□□□ -1.09
PIK3C3-213ENST00000590220 TRPM7Q96QT4 1865 aa8.26□□□□□ -1.09
PIK3C3-213ENST00000590220 VEGFBP49765 207 aa8.25□□□□□ -1.09
PIK3C3-213ENST00000590220 ADAMTS7Q9UKP4 1686 aa8.24□□□□□ -1.09
PIK3C3-213ENST00000590220 CCDC85CA6NKD9 419 aa8.24□□□□□ -1.09
PIK3C3-213ENST00000590220 LMNB1P20700 586 aa8.24□□□□□ -1.09
PIK3C3-213ENST00000590220 TMF1P82094 1093 aa8.24□□□□□ -1.09
PIK3C3-213ENST00000590220 CHADLQ6NUI6 762 aa8.24□□□□□ -1.09
PIK3C3-213ENST00000590220 PPARGC1BQ86YN6 1023 aaKnown RBP8.24□□□□□ -1.09
PIK3C3-213ENST00000590220 MAP3K19Q56UN5 1328 aa8.24□□□□□ -1.09
PIK3C3-213ENST00000590220 LOC102724428A0A0B4J2F2 783 aa8.23□□□□□ -1.09
PIK3C3-213ENST00000590220 GYS1P13807 737 aa8.23□□□□□ -1.09
PIK3C3-213ENST00000590220 ADRA2BP18089 450 aa8.23□□□□□ -1.09
PIK3C3-213ENST00000590220 SIK1P57059 783 aa8.23□□□□□ -1.09
PIK3C3-213ENST00000590220 MPRIPQ6WCQ1 1025 aa8.23□□□□□ -1.09
PIK3C3-213ENST00000590220 PCDH11XQ9BZA7 1347 aa8.23□□□□□ -1.09
PIK3C3-213ENST00000590220 PCDH11YQ9BZA8 1340 aa8.23□□□□□ -1.09
PIK3C3-213ENST00000590220 RASSF10A6NK89 507 aa8.22□□□□□ -1.09
PIK3C3-213ENST00000590220 GNPATO15228 680 aa8.22□□□□□ -1.09
PIK3C3-213ENST00000590220 ITPK1Q13572 414 aa8.22□□□□□ -1.09
PIK3C3-213ENST00000590220 NKX1-1Q15270 411 aaPredicted RBP8.22□□□□□ -1.09
PIK3C3-213ENST00000590220 TRAPPC3LQ5T215 181 aa8.22□□□□□ -1.09
PIK3C3-213ENST00000590220 NME9Q86XW9 330 aa8.22□□□□□ -1.09
PIK3C3-213ENST00000590220 PARP3Q9Y6F1 533 aa8.22□□□□□ -1.09
PIK3C3-213ENST00000590220 EDC4Q6P2E9 1401 aaKnown RBP8.21□□□□□ -1.09
PIK3C3-213ENST00000590220 SMG6Q86US8 1419 aaKnown RBP8.21□□□□□ -1.09
PIK3C3-213ENST00000590220 LTBP1Q14766 1721 aa8.21□□□□□ -1.09
PIK3C3-213ENST00000590220 ARFGEF2Q9Y6D5 1785 aa8.21□□□□□ -1.1
PIK3C3-213ENST00000590220 HOXC9P31274 260 aa8.21□□□□□ -1.1
PIK3C3-213ENST00000590220 MAP2K1Q02750 393 aaPredicted RBP8.21□□□□□ -1.1
PIK3C3-213ENST00000590220 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.1
PIK3C3-213ENST00000590220 PIGBQ92521 554 aa8.21□□□□□ -1.1
PIK3C3-213ENST00000590220 KDRP35968 1356 aa8.21□□□□□ -1.1
PIK3C3-213ENST00000590220 TMEM88BA6NKF7 163 aa8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 CYP27B1O15528 508 aa8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 ITGBL1O95965 494 aaPredicted RBP8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 RASSF7Q02833 373 aa8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 NBPF6Q5VWK0 638 aa8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 DPY19L2Q6NUT2 758 aa8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 ARHGEF1Q92888 912 aaKnown RBP8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 NBPF4Q96M43 638 aa8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 RTCBQ9Y3I0 505 aaKnown RBP8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 RTL1A6NKG5 1358 aa8.2□□□□□ -1.1
PIK3C3-213ENST00000590220 CACNA1SQ13698 1873 aa8.19□□□□□ -1.1
PIK3C3-213ENST00000590220 ANKRD31Q8N7Z5 1873 aa8.19□□□□□ -1.1
PIK3C3-213ENST00000590220 POTEIP0CG38 1075 aa8.19□□□□□ -1.1
PIK3C3-213ENST00000590220 POTEJP0CG39 1038 aa8.19□□□□□ -1.1
PIK3C3-213ENST00000590220 ATP6V1AP38606 617 aa8.19□□□□□ -1.1
PIK3C3-213ENST00000590220 PRPF38BQ5VTL8 546 aaKnown RBP8.19□□□□□ -1.1
PIK3C3-213ENST00000590220 RAPGEF4Q8WZA2 1011 aa8.19□□□□□ -1.1
PIK3C3-213ENST00000590220 LTV1Q96GA3 475 aaPredicted RBP8.19□□□□□ -1.1
PIK3C3-213ENST00000590220 TATP17735 454 aaPredicted RBP8.18□□□□□ -1.1
PIK3C3-213ENST00000590220 CHRNA5P30532 468 aa8.18□□□□□ -1.1
PIK3C3-213ENST00000590220 DEFB115Q30KQ5 88 aa8.18□□□□□ -1.1
PIK3C3-213ENST00000590220 LDHDQ86WU2 507 aa8.18□□□□□ -1.1
PIK3C3-213ENST00000590220 CNTNAP4Q9C0A0 1308 aa8.18□□□□□ -1.1
PIK3C3-213ENST00000590220 WDR33Q9C0J8 1336 aaKnown RBP8.18□□□□□ -1.1
PIK3C3-213ENST00000590220 NCAPD2Q15021 1401 aa8.18□□□□□ -1.1
PIK3C3-213ENST00000590220 NFKBIEO00221 500 aa8.17□□□□□ -1.1
PIK3C3-213ENST00000590220 RPS6KA4O75676 772 aa8.17□□□□□ -1.1
PIK3C3-213ENST00000590220 DDR1Q08345 913 aa8.17□□□□□ -1.1
PIK3C3-213ENST00000590220 TM4SF1P30408 202 aa8.16□□□□□ -1.1
PIK3C3-213ENST00000590220 RFC4P35249 363 aa8.16□□□□□ -1.1
PIK3C3-213ENST00000590220 TJP1Q07157 1748 aa8.16□□□□□ -1.1
PIK3C3-213ENST00000590220 L3MBTL3Q96JM7 780 aaPredicted RBP8.16□□□□□ -1.1
PIK3C3-213ENST00000590220 SLC4A9Q96Q91 983 aa8.16□□□□□ -1.1
PIK3C3-213ENST00000590220 MCOLN1Q9GZU1 580 aa8.16□□□□□ -1.1
PIK3C3-213ENST00000590220 ATG3Q9NT62 314 aa8.16□□□□□ -1.1
PIK3C3-213ENST00000590220 ASAP1Q9ULH1 1129 aa8.16□□□□□ -1.1
PIK3C3-213ENST00000590220 SLX4Q8IY92 1834 aa8.15□□□□□ -1.1
PIK3C3-213ENST00000590220 ANKRD26Q9UPS8 1709 aa8.15□□□□□ -1.1
PIK3C3-213ENST00000590220 LTBP3Q9NS15 1303 aa8.15□□□□□ -1.1
PIK3C3-213ENST00000590220 POLRMTO00411 1230 aaKnown RBP8.15□□□□□ -1.1
PIK3C3-213ENST00000590220 AKAP11Q9UKA4 1901 aa8.15□□□□□ -1.11
PIK3C3-213ENST00000590220 COL11A2P13942 1736 aaPredicted RBP8.15□□□□□ -1.11
PIK3C3-213ENST00000590220 A0A1W2PP64 1363 aa8.14□□□□□ -1.11
PIK3C3-213ENST00000590220 KIF24Q5T7B8 1368 aa8.14□□□□□ -1.11
PIK3C3-213ENST00000590220 RAB3GAP2Q9H2M9 1393 aa8.14□□□□□ -1.11
PIK3C3-213ENST00000590220 USP42Q9H9J4 1324 aaKnown RBP8.14□□□□□ -1.11
PIK3C3-213ENST00000590220 IQCA1LA6NCM1 817 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms