RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 KIF3CO14782 793 aa18.24■□□□□ 0.51
CCDC130-211ENST00000589669 NLRP2Q9NX02 1062 aa18.24■□□□□ 0.51
CCDC130-211ENST00000589669 HSPA5P11021 654 aaKnown RBP18.23■□□□□ 0.51
CCDC130-211ENST00000589669 FBLN1P23142 703 aa18.23■□□□□ 0.51
CCDC130-211ENST00000589669 E2F4Q16254 413 aa18.23■□□□□ 0.51
CCDC130-211ENST00000589669 PPP1R15BQ5SWA1 713 aa18.23■□□□□ 0.51
CCDC130-211ENST00000589669 C3orf67Q6ZVT6 689 aa18.23■□□□□ 0.51
CCDC130-211ENST00000589669 MARCH10Q8NA82 808 aaPredicted RBP18.23■□□□□ 0.51
CCDC130-211ENST00000589669 GGNBP2Q9H3C7 697 aa18.23■□□□□ 0.51
CCDC130-211ENST00000589669 MAP3K19Q56UN5 1328 aa18.23■□□□□ 0.51
CCDC130-211ENST00000589669 HOXC9P31274 260 aa18.21■□□□□ 0.51
CCDC130-211ENST00000589669 AMPHP49418 695 aa18.21■□□□□ 0.51
CCDC130-211ENST00000589669 DSG2Q14126 1118 aa18.21■□□□□ 0.51
CCDC130-211ENST00000589669 EZH2Q15910 746 aaKnown RBP18.21■□□□□ 0.51
CCDC130-211ENST00000589669 IL2RBP14784 551 aa18.2■□□□□ 0.5
CCDC130-211ENST00000589669 OVOS2A0A0G2JMS6 1433 aa18.2■□□□□ 0.5
CCDC130-211ENST00000589669 BCL9O00512 1426 aa18.2■□□□□ 0.5
CCDC130-211ENST00000589669 PARP4Q9UKK3 1724 aaKnown RBP18.2■□□□□ 0.5
CCDC130-211ENST00000589669 PARD3Q8TEW0 1356 aa18.19■□□□□ 0.5
CCDC130-211ENST00000589669 POTEB2H3BUK9 544 aa18.19■□□□□ 0.5
CCDC130-211ENST00000589669 PLSCR1O15162 318 aa18.18■□□□□ 0.5
CCDC130-211ENST00000589669 FOXK1P85037 733 aa18.18■□□□□ 0.5
CCDC130-211ENST00000589669 RGPD5Q99666 1765 aa18.17■□□□□ 0.5
CCDC130-211ENST00000589669 POTEJP0CG39 1038 aa18.17■□□□□ 0.5
CCDC130-211ENST00000589669 RRS1Q15050 365 aaKnown RBP18.17■□□□□ 0.5
CCDC130-211ENST00000589669 LTV1Q96GA3 475 aaPredicted RBP18.17■□□□□ 0.5
CCDC130-211ENST00000589669 RGPD1P0DJD0 1748 aa18.17■□□□□ 0.5
CCDC130-211ENST00000589669 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
CCDC130-211ENST00000589669 RTL1A6NKG5 1358 aa18.15■□□□□ 0.5
CCDC130-211ENST00000589669 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
CCDC130-211ENST00000589669 CAMK2BQ13554 666 aa18.14■□□□□ 0.49
CCDC130-211ENST00000589669 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
CCDC130-211ENST00000589669 KIF24Q5T7B8 1368 aa18.14■□□□□ 0.49
CCDC130-211ENST00000589669 PTF1AQ7RTS3 328 aa18.13■□□□□ 0.49
CCDC130-211ENST00000589669 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.13■□□□□ 0.49
CCDC130-211ENST00000589669 LTN1O94822 1766 aa18.12■□□□□ 0.49
CCDC130-211ENST00000589669 NBR1Q14596 966 aa18.12■□□□□ 0.49
CCDC130-211ENST00000589669 HSP90AB2PQ58FF8 381 aa18.12■□□□□ 0.49
CCDC130-211ENST00000589669 PANK3Q9H999 370 aa18.12■□□□□ 0.49
CCDC130-211ENST00000589669 LRRC37A3O60309 1634 aa18.12■□□□□ 0.49
CCDC130-211ENST00000589669 PEAK1Q9H792 1746 aa18.12■□□□□ 0.49
CCDC130-211ENST00000589669 TNS1Q9HBL0 1735 aaKnown RBP18.12■□□□□ 0.49
CCDC130-211ENST00000589669 PSDA5PKW4 1024 aaPredicted RBP18.11■□□□□ 0.49
CCDC130-211ENST00000589669 NBPF14Q5TI25 921 aa18.11■□□□□ 0.49
CCDC130-211ENST00000589669 NBPF6Q5VWK0 638 aa18.11■□□□□ 0.49
CCDC130-211ENST00000589669 PLPP6Q8IY26 295 aa18.11■□□□□ 0.49
CCDC130-211ENST00000589669 NBPF4Q96M43 638 aa18.11■□□□□ 0.49
CCDC130-211ENST00000589669 INSRP06213 1382 aa18.11■□□□□ 0.49
CCDC130-211ENST00000589669 TNS2Q63HR2 1409 aa18.11■□□□□ 0.49
CCDC130-211ENST00000589669 R3HDM1Q15032 1099 aaKnown RBP18.1■□□□□ 0.49
CCDC130-211ENST00000589669 KCNQ2O43526 872 aa18.09■□□□□ 0.49
CCDC130-211ENST00000589669 FLT4P35916 1363 aa18.08■□□□□ 0.49
CCDC130-211ENST00000589669 ARHGEF1Q92888 912 aaKnown RBP18.08■□□□□ 0.48
CCDC130-211ENST00000589669 EMILIN1Q9Y6C2 1016 aa18.08■□□□□ 0.48
CCDC130-211ENST00000589669 MYOM1P52179 1685 aa18.08■□□□□ 0.48
CCDC130-211ENST00000589669 WASHC2AQ641Q2 1341 aa18.07■□□□□ 0.48
CCDC130-211ENST00000589669 ZCRB1Q8TBF4 217 aaKnown RBP18.07■□□□□ 0.48
CCDC130-211ENST00000589669 DDX54Q8TDD1 881 aaKnown RBP18.07■□□□□ 0.48
CCDC130-211ENST00000589669 POLKQ9UBT6 870 aa18.06■□□□□ 0.48
CCDC130-211ENST00000589669 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
CCDC130-211ENST00000589669 SMG6Q86US8 1419 aaKnown RBP18.05■□□□□ 0.48
CCDC130-211ENST00000589669 WNK3Q9BYP7 1800 aa18.05■□□□□ 0.48
CCDC130-211ENST00000589669 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
CCDC130-211ENST00000589669 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
CCDC130-211ENST00000589669 EMILIN3Q9NT22 766 aa18.04■□□□□ 0.48
CCDC130-211ENST00000589669 TXNRD1Q16881 649 aa18.03■□□□□ 0.48
CCDC130-211ENST00000589669 TATP17735 454 aaPredicted RBP18.02■□□□□ 0.48
CCDC130-211ENST00000589669 USHBP1Q8N6Y0 703 aa18.02■□□□□ 0.48
CCDC130-211ENST00000589669 ARIH1Q9Y4X5 557 aaPredicted RBP18.02■□□□□ 0.48
CCDC130-211ENST00000589669 SBF2Q86WG5 1849 aa18.02■□□□□ 0.47
CCDC130-211ENST00000589669 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
CCDC130-211ENST00000589669 KNSTRNQ9Y448 316 aa18.01■□□□□ 0.47
CCDC130-211ENST00000589669 FAM208AQ9UK61 1670 aaKnown RBP18.01■□□□□ 0.47
CCDC130-211ENST00000589669 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
CCDC130-211ENST00000589669 NSD2O96028 1365 aa18■□□□□ 0.47
CCDC130-211ENST00000589669 KIF20BQ96Q89 1820 aa18■□□□□ 0.47
CCDC130-211ENST00000589669 PRIM1P49642 420 aaKnown RBP17.99■□□□□ 0.47
CCDC130-211ENST00000589669 MEGF6O75095 1541 aa17.98■□□□□ 0.47
CCDC130-211ENST00000589669 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
CCDC130-211ENST00000589669 EYA1Q99502 592 aa17.98■□□□□ 0.47
CCDC130-211ENST00000589669 RREB1Q92766 1687 aa17.97■□□□□ 0.47
CCDC130-211ENST00000589669 PER1O15534 1290 aaPredicted RBP17.97■□□□□ 0.47
CCDC130-211ENST00000589669 SCUBE2Q9NQ36 999 aa17.97■□□□□ 0.47
CCDC130-211ENST00000589669 EIF4A2Q14240 407 aaKnown RBP17.96■□□□□ 0.47
CCDC130-211ENST00000589669 MAMSTRQ6ZN01 415 aa17.96■□□□□ 0.47
CCDC130-211ENST00000589669 ANO8Q9HCE9 1232 aaPredicted RBP17.96■□□□□ 0.47
CCDC130-211ENST00000589669 RGPD3A6NKT7 1758 aaPredicted RBP17.96■□□□□ 0.47
CCDC130-211ENST00000589669 RGPD4Q7Z3J3 1758 aa17.96■□□□□ 0.47
CCDC130-211ENST00000589669 SLC15A2Q16348 729 aa17.95■□□□□ 0.46
CCDC130-211ENST00000589669 NCAPD2Q15021 1401 aa17.95■□□□□ 0.46
CCDC130-211ENST00000589669 PCDH11XQ9BZA7 1347 aa17.95■□□□□ 0.46
CCDC130-211ENST00000589669 PCDH11YQ9BZA8 1340 aa17.95■□□□□ 0.46
CCDC130-211ENST00000589669 DPYSL4O14531 572 aa17.94■□□□□ 0.46
CCDC130-211ENST00000589669 CYP27B1O15528 508 aa17.94■□□□□ 0.46
CCDC130-211ENST00000589669 SLC27A3Q5K4L6 730 aa17.94■□□□□ 0.46
CCDC130-211ENST00000589669 SYTL4Q96C24 671 aaPredicted RBP17.94■□□□□ 0.46
CCDC130-211ENST00000589669 STK32BQ9NY57 414 aa17.94■□□□□ 0.46
CCDC130-211ENST00000589669 SPG7Q9UQ90 795 aa17.94■□□□□ 0.46
CCDC130-211ENST00000589669 NUP188Q5SRE5 1749 aa17.94■□□□□ 0.46
CCDC130-211ENST00000589669 LRRC4BQ9NT99 713 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms