RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 WASHC2AQ641Q2 1341 aa24.98■■□□□ 1.59
CXXC1-211ENST00000589548 PPM1GO15355 546 aaPredicted RBP24.98■■□□□ 1.59
CXXC1-211ENST00000589548 KDRP35968 1356 aa24.97■■□□□ 1.59
CXXC1-211ENST00000589548 C4AP0C0L4 1744 aa24.96■■□□□ 1.59
CXXC1-211ENST00000589548 PHKG2P15735 406 aa24.96■■□□□ 1.59
CXXC1-211ENST00000589548 ATP6V1AP38606 617 aa24.96■■□□□ 1.59
CXXC1-211ENST00000589548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.96■■□□□ 1.59
CXXC1-211ENST00000589548 MYH14Q7Z406 1995 aaKnown RBP24.95■■□□□ 1.58
CXXC1-211ENST00000589548 MMP10P09238 476 aa24.95■■□□□ 1.58
CXXC1-211ENST00000589548 CDCA8Q53HL2 280 aa24.95■■□□□ 1.58
CXXC1-211ENST00000589548 ATG3Q9NT62 314 aa24.95■■□□□ 1.58
CXXC1-211ENST00000589548 C10orf71Q711Q0 1435 aa24.94■■□□□ 1.58
CXXC1-211ENST00000589548 IFNL2Q8IZJ0 200 aa24.93■■□□□ 1.58
CXXC1-211ENST00000589548 SLC4A9Q96Q91 983 aa24.92■■□□□ 1.58
CXXC1-211ENST00000589548 POLKQ9UBT6 870 aa24.91■■□□□ 1.58
CXXC1-211ENST00000589548 ARFGEF1Q9Y6D6 1849 aa24.91■■□□□ 1.58
CXXC1-211ENST00000589548 EIF4A2Q14240 407 aaKnown RBP24.88■■□□□ 1.57
CXXC1-211ENST00000589548 A0A0G2JLW4 131 aa24.87■■□□□ 1.57
CXXC1-211ENST00000589548 BCS1LQ9Y276 419 aa24.87■■□□□ 1.57
CXXC1-211ENST00000589548 PLEKHG2Q9H7P9 1386 aa24.86■■□□□ 1.57
CXXC1-211ENST00000589548 TGFB2P61812 414 aa24.86■■□□□ 1.57
CXXC1-211ENST00000589548 TRAPPC3LQ5T215 181 aa24.86■■□□□ 1.57
CXXC1-211ENST00000589548 RTCBQ9Y3I0 505 aaKnown RBP24.86■■□□□ 1.57
CXXC1-211ENST00000589548 WDR90Q96KV7 1748 aa24.85■■□□□ 1.57
CXXC1-211ENST00000589548 KDM6AO15550 1401 aaPredicted RBP24.85■■□□□ 1.57
CXXC1-211ENST00000589548 DPEP1P16444 411 aa24.84■■□□□ 1.57
CXXC1-211ENST00000589548 NLGN1Q8N2Q7 840 aa24.84■■□□□ 1.57
CXXC1-211ENST00000589548 ARHGEF1Q92888 912 aaKnown RBP24.84■■□□□ 1.57
CXXC1-211ENST00000589548 GYS1P13807 737 aa24.83■■□□□ 1.57
CXXC1-211ENST00000589548 APLP1P51693 650 aa24.83■■□□□ 1.57
CXXC1-211ENST00000589548 RBM42Q9BTD8 480 aaKnown RBP24.83■■□□□ 1.57
CXXC1-211ENST00000589548 TJP1Q07157 1748 aa24.83■■□□□ 1.57
CXXC1-211ENST00000589548 CNTNAP4Q9C0A0 1308 aa24.83■■□□□ 1.56
CXXC1-211ENST00000589548 RC3H1Q5TC82 1133 aaKnown RBP24.82■■□□□ 1.56
CXXC1-211ENST00000589548 NMRK2Q9NPI5 230 aa24.82■■□□□ 1.56
CXXC1-211ENST00000589548 ERVV-2B6SEH9 535 aa24.81■■□□□ 1.56
CXXC1-211ENST00000589548 TOMM70O94826 608 aa24.81■■□□□ 1.56
CXXC1-211ENST00000589548 ADRA2BP18089 450 aa24.81■■□□□ 1.56
CXXC1-211ENST00000589548 TNNT2P45379 298 aaPredicted RBP24.81■■□□□ 1.56
CXXC1-211ENST00000589548 ARHGAP27Q6ZUM4 889 aa24.81■■□□□ 1.56
CXXC1-211ENST00000589548 RPS6KA4O75676 772 aa24.8■■□□□ 1.56
CXXC1-211ENST00000589548 DNAJC5GQ8N7S2 189 aa24.8■■□□□ 1.56
CXXC1-211ENST00000589548 CCDC87Q9NVE4 849 aa24.8■■□□□ 1.56
CXXC1-211ENST00000589548 ADAMTS7Q9UKP4 1686 aa24.8■■□□□ 1.56
CXXC1-211ENST00000589548 SBF1O95248 1867 aa24.79■■□□□ 1.56
CXXC1-211ENST00000589548 KCNA3P22001 575 aa24.79■■□□□ 1.56
CXXC1-211ENST00000589548 FCHSD2O94868 740 aa24.78■■□□□ 1.56
CXXC1-211ENST00000589548 DCAF5Q96JK2 942 aa24.78■■□□□ 1.56
CXXC1-211ENST00000589548 RFC4P35249 363 aa24.77■■□□□ 1.56
CXXC1-211ENST00000589548 SCN11AQ9UI33 1791 aa24.76■■□□□ 1.55
CXXC1-211ENST00000589548 PARP3Q9Y6F1 533 aa24.76■■□□□ 1.55
CXXC1-211ENST00000589548 HSP90AB1P08238 724 aaKnown RBP24.75■■□□□ 1.55
CXXC1-211ENST00000589548 C9orf131Q5VYM1 1079 aa24.74■■□□□ 1.55
CXXC1-211ENST00000589548 ZNF530Q6P9A1 599 aaPredicted RBP24.74■■□□□ 1.55
CXXC1-211ENST00000589548 SRP68Q9UHB9 627 aaKnown RBP24.74■■□□□ 1.55
CXXC1-211ENST00000589548 VIRMAQ69YN4 1812 aaKnown RBP24.74■■□□□ 1.55
CXXC1-211ENST00000589548 KCPQ6ZWJ8 1503 aa24.73■■□□□ 1.55
CXXC1-211ENST00000589548 CABP4P57796 275 aa24.73■■□□□ 1.55
CXXC1-211ENST00000589548 PLEKHO1Q53GL0 409 aaPredicted RBP24.73■■□□□ 1.55
CXXC1-211ENST00000589548 TNRC6CQ9HCJ0 1690 aaKnown RBP24.72■■□□□ 1.55
CXXC1-211ENST00000589548 CRKLP46109 303 aaKnown RBP24.72■■□□□ 1.55
CXXC1-211ENST00000589548 DDR1Q08345 913 aa24.72■■□□□ 1.55
CXXC1-211ENST00000589548 AFDNP55196 1824 aaKnown RBP24.71■■□□□ 1.55
CXXC1-211ENST00000589548 PTCD1O75127 700 aaKnown RBP24.71■■□□□ 1.55
CXXC1-211ENST00000589548 FKBP8Q14318 412 aa24.71■■□□□ 1.55
CXXC1-211ENST00000589548 AEBP1Q8IUX7 1158 aa24.71■■□□□ 1.55
CXXC1-211ENST00000589548 RBM46Q8TBY0 533 aaKnown RBP24.71■■□□□ 1.55
CXXC1-211ENST00000589548 POLR3GLQ9BT43 218 aa24.71■■□□□ 1.55
CXXC1-211ENST00000589548 USP42Q9H9J4 1324 aaKnown RBP24.7■■□□□ 1.54
CXXC1-211ENST00000589548 HTRA3P83110 453 aa24.69■■□□□ 1.54
CXXC1-211ENST00000589548 PIM2Q9P1W9 311 aa24.69■■□□□ 1.54
CXXC1-211ENST00000589548 AMOTQ4VCS5 1084 aa24.68■■□□□ 1.54
CXXC1-211ENST00000589548 CHRNA5P30532 468 aa24.67■■□□□ 1.54
CXXC1-211ENST00000589548 MTHFSP49914 203 aa24.67■■□□□ 1.54
CXXC1-211ENST00000589548 NFATC2IPQ8NCF5 419 aa24.67■■□□□ 1.54
CXXC1-211ENST00000589548 DLEC1Q9Y238 1755 aa24.67■■□□□ 1.54
CXXC1-211ENST00000589548 DALRD3Q5D0E6 543 aaKnown RBP24.66■■□□□ 1.54
CXXC1-211ENST00000589548 NRXN2Q9P2S2 1712 aa24.66■■□□□ 1.54
CXXC1-211ENST00000589548 CCDC88AQ3V6T2 1871 aa24.65■■□□□ 1.54
CXXC1-211ENST00000589548 RNF181Q9P0P0 153 aa24.65■■□□□ 1.54
CXXC1-211ENST00000589548 POLRMTO00411 1230 aaKnown RBP24.64■■□□□ 1.54
CXXC1-211ENST00000589548 INTS5Q6P9B9 1019 aaKnown RBP24.64■■□□□ 1.54
CXXC1-211ENST00000589548 PCNTO95613 3336 aa24.64■■□□□ 1.53
CXXC1-211ENST00000589548 C1orf141Q5JVX7 400 aa24.63■■□□□ 1.53
CXXC1-211ENST00000589548 KLRG1Q96E93 195 aa24.63■■□□□ 1.53
CXXC1-211ENST00000589548 PANK3Q9H999 370 aa24.63■■□□□ 1.53
CXXC1-211ENST00000589548 TM4SF1P30408 202 aa24.62■■□□□ 1.53
CXXC1-211ENST00000589548 C16orf71Q8IYS4 520 aaPredicted RBP24.62■■□□□ 1.53
CXXC1-211ENST00000589548 KDM2BQ8NHM5 1336 aa24.61■■□□□ 1.53
CXXC1-211ENST00000589548 FSTL1Q12841 308 aa24.61■■□□□ 1.53
CXXC1-211ENST00000589548 TIAM2Q8IVF5 1701 aa24.61■■□□□ 1.53
CXXC1-211ENST00000589548 SULT6B1Q6IMI4 303 aa24.6■■□□□ 1.53
CXXC1-211ENST00000589548 JMYQ8N9B5 988 aa24.6■■□□□ 1.53
CXXC1-211ENST00000589548 RRAGCQ9HB90 399 aa24.6■■□□□ 1.53
CXXC1-211ENST00000589548 MRC1P22897 1456 aa24.59■■□□□ 1.53
CXXC1-211ENST00000589548 DNAJC10Q8IXB1 793 aa24.59■■□□□ 1.53
CXXC1-211ENST00000589548 SOS1Q07889 1333 aaPredicted RBP24.59■■□□□ 1.53
CXXC1-211ENST00000589548 RASSF7Q02833 373 aa24.58■■□□□ 1.53
CXXC1-211ENST00000589548 USPL1Q5W0Q7 1092 aa24.58■■□□□ 1.53
CXXC1-211ENST00000589548 TIMELESSQ9UNS1 1208 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms