RNA–Protein interactions for RNA: ENST00000589536.5

GRN-215, Transcript of granulin precursor, human

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-215	ENST00000589536	ITPK1	Q13572	414 aa		33.32	■■■□□ 2.92
GRN-215	ENST00000589536	SULT6B1	Q6IMI4	303 aa		33.31	■■■□□ 2.92
GRN-215	ENST00000589536	NLGN2	Q8NFZ4	835 aa		33.29	■■■□□ 2.92
GRN-215	ENST00000589536	GOLGB1	Q14789	3259 aa	Known RBP	33.29	■■■□□ 2.92
GRN-215	ENST00000589536	ATP6V1A	P38606	617 aa		33.28	■■■□□ 2.92
GRN-215	ENST00000589536	MTHFS	P49914	203 aa		33.28	■■■□□ 2.92
GRN-215	ENST00000589536	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.27	■■■□□ 2.92
GRN-215	ENST00000589536	SSFA2	P28290	1259 aa		33.27	■■■□□ 2.92
GRN-215	ENST00000589536	SMIM5	Q71RC9	77 aa		33.27	■■■□□ 2.92
GRN-215	ENST00000589536	ZNF831	Q5JPB2	1677 aa		33.26	■■■□□ 2.92
GRN-215	ENST00000589536	PHF14	O94880	888 aa		33.26	■■■□□ 2.91
GRN-215	ENST00000589536	C1orf141	Q5JVX7	400 aa		33.24	■■■□□ 2.91
GRN-215	ENST00000589536	CC2D1B	Q5T0F9	858 aa	Known RBP	33.24	■■■□□ 2.91
GRN-215	ENST00000589536	SLC4A9	Q96Q91	983 aa		33.24	■■■□□ 2.91
GRN-215	ENST00000589536	NPC1L1	Q9UHC9	1359 aa		33.23	■■■□□ 2.91
GRN-215	ENST00000589536	GPR162	Q16538	588 aa		33.23	■■■□□ 2.91
GRN-215	ENST00000589536	CHD4	Q14839	1912 aa		33.22	■■■□□ 2.91
GRN-215	ENST00000589536	CABP4	P57796	275 aa		33.22	■■■□□ 2.91
GRN-215	ENST00000589536	GNPAT	O15228	680 aa		33.21	■■■□□ 2.91
GRN-215	ENST00000589536	COL5A3	P25940	1745 aa	Predicted RBP	33.19	■■■□□ 2.9
GRN-215	ENST00000589536	SCN11A	Q9UI33	1791 aa		33.17	■■■□□ 2.9
GRN-215	ENST00000589536	RBM42	Q9BTD8	480 aa	Known RBP	33.17	■■■□□ 2.9
GRN-215	ENST00000589536	CD2AP	Q9Y5K6	639 aa		33.17	■■■□□ 2.9
GRN-215	ENST00000589536	COL3A1	P02461	1466 aa	Predicted RBP	33.15	■■■□□ 2.9
GRN-215	ENST00000589536	PELP1	Q8IZL8	1130 aa	Known RBP	33.15	■■■□□ 2.9
GRN-215	ENST00000589536	DIAPH1	O60610	1272 aa	Known RBP	33.14	■■■□□ 2.9
GRN-215	ENST00000589536	HMOX1	P09601	288 aa		33.14	■■■□□ 2.9
GRN-215	ENST00000589536	AKAP4	Q5JQC9	854 aa		33.14	■■■□□ 2.9
GRN-215	ENST00000589536	ZNF784	Q8NCA9	323 aa	Predicted RBP	33.14	■■■□□ 2.9
GRN-215	ENST00000589536	NFATC2IP	Q8NCF5	419 aa		33.14	■■■□□ 2.9
GRN-215	ENST00000589536	CNTNAP4	Q9C0A0	1308 aa		33.13	■■■□□ 2.89
GRN-215	ENST00000589536	YBX3	P16989	372 aa	Known RBP eCLIP	33.12	■■■□□ 2.89
GRN-215	ENST00000589536	RC3H1	Q5TC82	1133 aa	Known RBP	33.12	■■■□□ 2.89
GRN-215	ENST00000589536	RTCB	Q9Y3I0	505 aa	Known RBP	33.11	■■■□□ 2.89
GRN-215	ENST00000589536	CIC	Q96RK0	1608 aa	Predicted RBP	33.1	■■■□□ 2.89
GRN-215	ENST00000589536	MRC1	P22897	1456 aa		33.1	■■■□□ 2.89
GRN-215	ENST00000589536	PTCD1	O75127	700 aa	Known RBP	33.08	■■■□□ 2.89
GRN-215	ENST00000589536	TRAPPC3L	Q5T215	181 aa		33.07	■■■□□ 2.88
GRN-215	ENST00000589536	TJP1	Q07157	1748 aa		33.07	■■■□□ 2.88
GRN-215	ENST00000589536	ADAMTS7	Q9UKP4	1686 aa		33.07	■■■□□ 2.88
GRN-215	ENST00000589536	MYH14	Q7Z406	1995 aa	Known RBP	33.07	■■■□□ 2.88
GRN-215	ENST00000589536	ADRA2B	P18089	450 aa		33.06	■■■□□ 2.88
GRN-215	ENST00000589536	CNGB1	Q14028	1251 aa	Predicted RBP	33.06	■■■□□ 2.88
GRN-215	ENST00000589536	SLC52A2	Q9HAB3	445 aa		33.06	■■■□□ 2.88
GRN-215	ENST00000589536	LGR6	Q9HBX8	967 aa		33.06	■■■□□ 2.88
GRN-215	ENST00000589536	RPS6KA4	O75676	772 aa		33.05	■■■□□ 2.88
GRN-215	ENST00000589536	MTHFSD	Q2M296	383 aa	Known RBP	33.05	■■■□□ 2.88
GRN-215	ENST00000589536	GRIN3B	O60391	1043 aa		33.04	■■■□□ 2.88
GRN-215	ENST00000589536	ARHGEF1	Q92888	912 aa	Known RBP	33.04	■■■□□ 2.88
GRN-215	ENST00000589536	RNMT	O43148	476 aa	Known RBP	33.03	■■■□□ 2.88
GRN-215	ENST00000589536	C4A	P0C0L4	1744 aa		33.02	■■■□□ 2.88
GRN-215	ENST00000589536	VIRMA	Q69YN4	1812 aa	Known RBP	33.02	■■■□□ 2.88
GRN-215	ENST00000589536	MMP10	P09238	476 aa		33.02	■■■□□ 2.88
GRN-215	ENST00000589536	CRKL	P46109	303 aa	Known RBP	33	■■■□□ 2.87
GRN-215	ENST00000589536	NLGN1	Q8N2Q7	840 aa		32.98	■■■□□ 2.87
GRN-215	ENST00000589536	GYS1	P13807	737 aa		32.97	■■■□□ 2.87
GRN-215	ENST00000589536	RFC4	P35249	363 aa		32.97	■■■□□ 2.87
GRN-215	ENST00000589536	KCP	Q6ZWJ8	1503 aa		32.97	■■■□□ 2.87
GRN-215	ENST00000589536	U2SURP	O15042	1029 aa	Known RBP	32.96	■■■□□ 2.87
GRN-215	ENST00000589536	KIF13B	Q9NQT8	1826 aa		32.95	■■■□□ 2.87
GRN-215	ENST00000589536	SLC39A6	Q13433	755 aa		32.94	■■■□□ 2.86
GRN-215	ENST00000589536	INTS5	Q6P9B9	1019 aa	Known RBP	32.93	■■■□□ 2.86
GRN-215	ENST00000589536	DNAJC10	Q8IXB1	793 aa		32.93	■■■□□ 2.86
GRN-215	ENST00000589536	KIAA1551	Q9HCM1	1747 aa		32.92	■■■□□ 2.86
GRN-215	ENST00000589536	C10orf71	Q711Q0	1435 aa		32.92	■■■□□ 2.86
GRN-215	ENST00000589536	PXDNL	A1KZ92	1463 aa		32.91	■■■□□ 2.86
GRN-215	ENST00000589536	USP42	Q9H9J4	1324 aa	Known RBP	32.9	■■■□□ 2.86
GRN-215	ENST00000589536	UBR2	Q8IWV8	1755 aa		32.9	■■■□□ 2.86
GRN-215	ENST00000589536	GAS2L2	Q8NHY3	880 aa		32.89	■■■□□ 2.86
GRN-215	ENST00000589536	CFAP53	Q96M91	514 aa		32.88	■■■□□ 2.85
GRN-215	ENST00000589536	CCDC87	Q9NVE4	849 aa		32.88	■■■□□ 2.85
GRN-215	ENST00000589536	SRP68	Q9UHB9	627 aa	Known RBP	32.88	■■■□□ 2.85
GRN-215	ENST00000589536	WWC3	Q9ULE0	1092 aa		32.88	■■■□□ 2.85
GRN-215	ENST00000589536	CYP19A1	P11511	503 aa	Predicted RBP	32.87	■■■□□ 2.85
GRN-215	ENST00000589536	PPP2R1A	P30153	589 aa		32.86	■■■□□ 2.85
GRN-215	ENST00000589536	SOS1	Q07889	1333 aa	Predicted RBP	32.85	■■■□□ 2.85
GRN-215	ENST00000589536	GNAT3	A8MTJ3	354 aa		32.85	■■■□□ 2.85
GRN-215	ENST00000589536	IL17RE	Q8NFR9	667 aa		32.85	■■■□□ 2.85
GRN-215	ENST00000589536	RSPH6A	Q9H0K4	717 aa		32.85	■■■□□ 2.85
GRN-215	ENST00000589536	TGFB2	P61812	414 aa		32.84	■■■□□ 2.85
GRN-215	ENST00000589536	FKBP8	Q14318	412 aa		32.84	■■■□□ 2.85
GRN-215	ENST00000589536	VSIG10	Q8N0Z9	540 aa		32.84	■■■□□ 2.85
GRN-215	ENST00000589536	PARP3	Q9Y6F1	533 aa		32.84	■■■□□ 2.85
GRN-215	ENST00000589536	SIPA1L3	O60292	1781 aa	Predicted RBP	32.83	■■■□□ 2.85
GRN-215	ENST00000589536	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.83	■■■□□ 2.85
GRN-215	ENST00000589536	PRKAR2B	P31323	418 aa		32.82	■■■□□ 2.84
GRN-215	ENST00000589536	PHACTR3	Q96KR7	559 aa		32.82	■■■□□ 2.84
GRN-215	ENST00000589536	DDR1	Q08345	913 aa		32.8	■■■□□ 2.84
GRN-215	ENST00000589536	ZBTB1	Q9Y2K1	713 aa		32.8	■■■□□ 2.84
GRN-215	ENST00000589536	ADCY9	O60503	1353 aa		32.8	■■■□□ 2.84
GRN-215	ENST00000589536	CEMIP	Q8WUJ3	1361 aa		32.8	■■■□□ 2.84
GRN-215	ENST00000589536	TEF	Q10587	303 aa		32.79	■■■□□ 2.84
GRN-215	ENST00000589536	NUDC	Q9Y266	331 aa		32.79	■■■□□ 2.84
GRN-215	ENST00000589536	ATP10D	Q9P241	1426 aa		32.78	■■■□□ 2.84
GRN-215	ENST00000589536		A0A0G2JLW4	131 aa		32.78	■■■□□ 2.84
GRN-215	ENST00000589536	TTC5	Q8N0Z6	440 aa		32.78	■■■□□ 2.84
GRN-215	ENST00000589536	COL15A1	P39059	1388 aa		32.78	■■■□□ 2.84
GRN-215	ENST00000589536	C1QTNF8	P60827	252 aa		32.76	■■■□□ 2.83
GRN-215	ENST00000589536	USPL1	Q5W0Q7	1092 aa		32.76	■■■□□ 2.83
GRN-215	ENST00000589536	ZNF790	Q6PG37	636 aa		32.76	■■■□□ 2.83

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