RNA–Protein interactions for RNA: ENST00000589369.2

AP3D1-207, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-207ENST00000589369 KDM6AO15550 1401 aaPredicted RBP23.32■■□□□ 1.32
AP3D1-207ENST00000589369 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
AP3D1-207ENST00000589369 KDRP35968 1356 aa23.3■■□□□ 1.32
AP3D1-207ENST00000589369 ERVV-2B6SEH9 535 aa23.3■■□□□ 1.32
AP3D1-207ENST00000589369 ATP6V1AP38606 617 aa23.3■■□□□ 1.32
AP3D1-207ENST00000589369 ZNF530Q6P9A1 599 aaPredicted RBP23.3■■□□□ 1.32
AP3D1-207ENST00000589369 DCAF5Q96JK2 942 aa23.3■■□□□ 1.32
AP3D1-207ENST00000589369 SSFA2P28290 1259 aa23.29■■□□□ 1.32
AP3D1-207ENST00000589369 IL13P35225 146 aa23.29■■□□□ 1.32
AP3D1-207ENST00000589369 SLC4A9Q96Q91 983 aa23.29■■□□□ 1.32
AP3D1-207ENST00000589369 HSP90AB1P08238 724 aaKnown RBP23.28■■□□□ 1.32
AP3D1-207ENST00000589369 AMOTQ4VCS5 1084 aa23.28■■□□□ 1.32
AP3D1-207ENST00000589369 SULT6B1Q6IMI4 303 aa23.28■■□□□ 1.32
AP3D1-207ENST00000589369 GNPATO15228 680 aa23.27■■□□□ 1.32
AP3D1-207ENST00000589369 YBX3P16989 372 aaKnown RBP eCLIP23.27■■□□□ 1.32
AP3D1-207ENST00000589369 CD2APQ9Y5K6 639 aa23.26■■□□□ 1.31
AP3D1-207ENST00000589369 PER1O15534 1290 aaPredicted RBP23.25■■□□□ 1.31
AP3D1-207ENST00000589369 CABP4P57796 275 aa23.24■■□□□ 1.31
AP3D1-207ENST00000589369 ZNF831Q5JPB2 1677 aa23.24■■□□□ 1.31
AP3D1-207ENST00000589369 MTHFSP49914 203 aa23.23■■□□□ 1.31
AP3D1-207ENST00000589369 RBM42Q9BTD8 480 aaKnown RBP23.23■■□□□ 1.31
AP3D1-207ENST00000589369 C1orf141Q5JVX7 400 aa23.22■■□□□ 1.31
AP3D1-207ENST00000589369 COL5A3P25940 1745 aaPredicted RBP23.22■■□□□ 1.31
AP3D1-207ENST00000589369 CC2D1BQ5T0F9 858 aaKnown RBP23.2■■□□□ 1.3
AP3D1-207ENST00000589369 GRIN3BO60391 1043 aa23.19■■□□□ 1.3
AP3D1-207ENST00000589369 NFATC2IPQ8NCF5 419 aa23.19■■□□□ 1.3
AP3D1-207ENST00000589369 CNTNAP4Q9C0A0 1308 aa23.18■■□□□ 1.3
AP3D1-207ENST00000589369 RTCBQ9Y3I0 505 aaKnown RBP23.18■■□□□ 1.3
AP3D1-207ENST00000589369 SCN11AQ9UI33 1791 aa23.17■■□□□ 1.3
AP3D1-207ENST00000589369 RC3H1Q5TC82 1133 aaKnown RBP23.17■■□□□ 1.3
AP3D1-207ENST00000589369 MYH14Q7Z406 1995 aaKnown RBP23.17■■□□□ 1.3
AP3D1-207ENST00000589369 PTCD1O75127 700 aaKnown RBP23.16■■□□□ 1.3
AP3D1-207ENST00000589369 HMOX1P09601 288 aa23.16■■□□□ 1.3
AP3D1-207ENST00000589369 TRAPPC3LQ5T215 181 aa23.16■■□□□ 1.3
AP3D1-207ENST00000589369 MMP10P09238 476 aa23.15■■□□□ 1.3
AP3D1-207ENST00000589369 AKAP4Q5JQC9 854 aa23.15■■□□□ 1.3
AP3D1-207ENST00000589369 ARHGEF1Q92888 912 aaKnown RBP23.15■■□□□ 1.3
AP3D1-207ENST00000589369 RPS6KA4O75676 772 aa23.14■■□□□ 1.29
AP3D1-207ENST00000589369 TJP1Q07157 1748 aa23.13■■□□□ 1.29
AP3D1-207ENST00000589369 ADRA2BP18089 450 aa23.13■■□□□ 1.29
AP3D1-207ENST00000589369 LGR6Q9HBX8 967 aa23.13■■□□□ 1.29
AP3D1-207ENST00000589369 WWC3Q9ULE0 1092 aa23.13■■□□□ 1.29
AP3D1-207ENST00000589369 NPC1L1Q9UHC9 1359 aa23.13■■□□□ 1.29
AP3D1-207ENST00000589369 COL3A1P02461 1466 aaPredicted RBP23.12■■□□□ 1.29
AP3D1-207ENST00000589369 DIAPH1O60610 1272 aaKnown RBP23.12■■□□□ 1.29
AP3D1-207ENST00000589369 CICQ96RK0 1608 aaPredicted RBP23.11■■□□□ 1.29
AP3D1-207ENST00000589369 C4AP0C0L4 1744 aa23.11■■□□□ 1.29
AP3D1-207ENST00000589369 GYS1P13807 737 aa23.11■■□□□ 1.29
AP3D1-207ENST00000589369 CNGB1Q14028 1251 aaPredicted RBP23.11■■□□□ 1.29
AP3D1-207ENST00000589369 SLC52A2Q9HAB3 445 aa23.11■■□□□ 1.29
AP3D1-207ENST00000589369 MRC1P22897 1456 aa23.11■■□□□ 1.29
AP3D1-207ENST00000589369 CRKLP46109 303 aaKnown RBP23.1■■□□□ 1.29
AP3D1-207ENST00000589369 MTHFSDQ2M296 383 aaKnown RBP23.1■■□□□ 1.29
AP3D1-207ENST00000589369 NLGN1Q8N2Q7 840 aa23.1■■□□□ 1.29
AP3D1-207ENST00000589369 RNMTO43148 476 aaKnown RBP23.09■■□□□ 1.29
AP3D1-207ENST00000589369 KIF13BQ9NQT8 1826 aa23.09■■□□□ 1.29
AP3D1-207ENST00000589369 KIAA1551Q9HCM1 1747 aa23.08■■□□□ 1.29
AP3D1-207ENST00000589369 VIRMAQ69YN4 1812 aaKnown RBP23.08■■□□□ 1.29
AP3D1-207ENST00000589369 RFC4P35249 363 aa23.08■■□□□ 1.29
AP3D1-207ENST00000589369 PXDNLA1KZ92 1463 aa23.08■■□□□ 1.29
AP3D1-207ENST00000589369 ADAMTS7Q9UKP4 1686 aa23.08■■□□□ 1.29
AP3D1-207ENST00000589369 C1QTNF8P60827 252 aa23.07■■□□□ 1.28
AP3D1-207ENST00000589369 C10orf71Q711Q0 1435 aa23.07■■□□□ 1.28
AP3D1-207ENST00000589369 SLC39A6Q13433 755 aa23.06■■□□□ 1.28
AP3D1-207ENST00000589369 INTS5Q6P9B9 1019 aaKnown RBP23.06■■□□□ 1.28
AP3D1-207ENST00000589369 DNAJC10Q8IXB1 793 aa23.05■■□□□ 1.28
AP3D1-207ENST00000589369 SRP68Q9UHB9 627 aaKnown RBP23.05■■□□□ 1.28
AP3D1-207ENST00000589369 ATP10DQ9P241 1426 aa23.05■■□□□ 1.28
AP3D1-207ENST00000589369 KCPQ6ZWJ8 1503 aa23.04■■□□□ 1.28
AP3D1-207ENST00000589369 N4BP2Q86UW6 1770 aaPredicted RBP23.04■■□□□ 1.28
AP3D1-207ENST00000589369 ADCY9O60503 1353 aa23.03■■□□□ 1.28
AP3D1-207ENST00000589369 GIGYF1O75420 1035 aaPredicted RBP23.03■■□□□ 1.28
AP3D1-207ENST00000589369 USP42Q9H9J4 1324 aaKnown RBP23.03■■□□□ 1.28
AP3D1-207ENST00000589369 A0A0G2JLW4 131 aa23.01■■□□□ 1.27
AP3D1-207ENST00000589369 U2SURPO15042 1029 aaKnown RBP23.01■■□□□ 1.27
AP3D1-207ENST00000589369 TGFB2P61812 414 aa23.01■■□□□ 1.27
AP3D1-207ENST00000589369 FKBP8Q14318 412 aa23.01■■□□□ 1.27
AP3D1-207ENST00000589369 CCDC87Q9NVE4 849 aa23.01■■□□□ 1.27
AP3D1-207ENST00000589369 PARP3Q9Y6F1 533 aa23.01■■□□□ 1.27
AP3D1-207ENST00000589369 CYP19A1P11511 503 aaPredicted RBP23■■□□□ 1.27
AP3D1-207ENST00000589369 DDR1Q08345 913 aa22.99■■□□□ 1.27
AP3D1-207ENST00000589369 SOS1Q07889 1333 aaPredicted RBP22.99■■□□□ 1.27
AP3D1-207ENST00000589369 DPEP1P16444 411 aa22.98■■□□□ 1.27
AP3D1-207ENST00000589369 UBR2Q8IWV8 1755 aa22.98■■□□□ 1.27
AP3D1-207ENST00000589369 SENP3-EIF4A1A0A087X0R7 540 aa22.97■■□□□ 1.27
AP3D1-207ENST00000589369 IL17REQ8NFR9 667 aa22.97■■□□□ 1.27
AP3D1-207ENST00000589369 BCS1LQ9Y276 419 aa22.96■■□□□ 1.27
AP3D1-207ENST00000589369 ZBTB1Q9Y2K1 713 aa22.96■■□□□ 1.27
AP3D1-207ENST00000589369 BRCA1P38398 1863 aaKnown RBP22.96■■□□□ 1.27
AP3D1-207ENST00000589369 KCNA3P22001 575 aa22.95■■□□□ 1.26
AP3D1-207ENST00000589369 USPL1Q5W0Q7 1092 aa22.95■■□□□ 1.26
AP3D1-207ENST00000589369 GAS2L2Q8NHY3 880 aa22.95■■□□□ 1.26
AP3D1-207ENST00000589369 TM4SF1P30408 202 aa22.94■■□□□ 1.26
AP3D1-207ENST00000589369 VSIG10Q8N0Z9 540 aa22.94■■□□□ 1.26
AP3D1-207ENST00000589369 ZNF526Q8TF50 670 aaPredicted RBP22.94■■□□□ 1.26
AP3D1-207ENST00000589369 GNAT3A8MTJ3 354 aa22.93■■□□□ 1.26
AP3D1-207ENST00000589369 POLRMTO00411 1230 aaKnown RBP22.93■■□□□ 1.26
AP3D1-207ENST00000589369 PHACTR3Q96KR7 559 aa22.93■■□□□ 1.26
AP3D1-207ENST00000589369 GPBP1L1Q9HC44 474 aaPredicted RBP22.93■■□□□ 1.26
AP3D1-207ENST00000589369 SIPA1L3O60292 1781 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms