RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 MRPL50Q8N5N7 158 aaKnown RBP12.76□□□□□ -0.37
RANBP3-216ENST00000589353 SLC52A2Q9HAB3 445 aa12.76□□□□□ -0.37
RANBP3-216ENST00000589353 NOB1Q9ULX3 412 aaKnown RBP12.76□□□□□ -0.37
RANBP3-216ENST00000589353 ERVV-2B6SEH9 535 aa12.75□□□□□ -0.37
RANBP3-216ENST00000589353 CYP27B1O15528 508 aa12.75□□□□□ -0.37
RANBP3-216ENST00000589353 CABP4P57796 275 aa12.75□□□□□ -0.37
RANBP3-216ENST00000589353 PLCH1Q4KWH8 1693 aa12.75□□□□□ -0.37
RANBP3-216ENST00000589353 C20orf194Q5TEA3 1177 aa12.75□□□□□ -0.37
RANBP3-216ENST00000589353 VIRMAQ69YN4 1812 aaKnown RBP12.75□□□□□ -0.37
RANBP3-216ENST00000589353 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
RANBP3-216ENST00000589353 SCN11AQ9UI33 1791 aa12.75□□□□□ -0.37
RANBP3-216ENST00000589353 ADAMTS7Q9UKP4 1686 aa12.75□□□□□ -0.37
RANBP3-216ENST00000589353 NWD2Q9ULI1 1742 aa12.75□□□□□ -0.37
RANBP3-216ENST00000589353 PTPRCP08575 1304 aa12.74□□□□□ -0.37
RANBP3-216ENST00000589353 EXOC5O00471 708 aa12.74□□□□□ -0.37
RANBP3-216ENST00000589353 EIF4A1P60842 406 aaKnown RBP12.74□□□□□ -0.37
RANBP3-216ENST00000589353 NKX1-1Q15270 411 aaPredicted RBP12.74□□□□□ -0.37
RANBP3-216ENST00000589353 NGLY1Q96IV0 654 aa12.74□□□□□ -0.37
RANBP3-216ENST00000589353 CACNA1FO60840 1977 aa12.73□□□□□ -0.37
RANBP3-216ENST00000589353 MVPQ14764 893 aaKnown RBP12.73□□□□□ -0.37
RANBP3-216ENST00000589353 TTC5Q8N0Z6 440 aa12.73□□□□□ -0.37
RANBP3-216ENST00000589353 DDX19BQ9UMR2 479 aa12.73□□□□□ -0.37
RANBP3-216ENST00000589353 SLIT2O94813 1529 aa12.72□□□□□ -0.37
RANBP3-216ENST00000589353 KDM3BQ7LBC6 1761 aa12.72□□□□□ -0.37
RANBP3-216ENST00000589353 SPATA31A1Q5TZJ5 1347 aa12.72□□□□□ -0.37
RANBP3-216ENST00000589353 TRIM27P14373 513 aa12.72□□□□□ -0.37
RANBP3-216ENST00000589353 MEX3CQ5U5Q3 659 aaKnown RBP12.72□□□□□ -0.37
RANBP3-216ENST00000589353 B4GALNT3Q6L9W6 998 aa12.72□□□□□ -0.37
RANBP3-216ENST00000589353 UNC5CLQ8IV45 518 aa12.72□□□□□ -0.37
RANBP3-216ENST00000589353 DDX54Q8TDD1 881 aaKnown RBP12.72□□□□□ -0.37
RANBP3-216ENST00000589353 PANK1Q8TE04 598 aa12.72□□□□□ -0.37
RANBP3-216ENST00000589353 COG6Q9Y2V7 657 aa12.72□□□□□ -0.37
RANBP3-216ENST00000589353 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
RANBP3-216ENST00000589353 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
RANBP3-216ENST00000589353 SPATA31A5Q5VU36 1347 aa12.71□□□□□ -0.37
RANBP3-216ENST00000589353 SPATA31A7Q8IWB4 1347 aa12.71□□□□□ -0.37
RANBP3-216ENST00000589353 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
RANBP3-216ENST00000589353 KRT24Q2M2I5 525 aa12.71□□□□□ -0.37
RANBP3-216ENST00000589353 HDGFL1Q5TGJ6 251 aa12.71□□□□□ -0.37
RANBP3-216ENST00000589353 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
RANBP3-216ENST00000589353 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
RANBP3-216ENST00000589353 CLUAP1Q96AJ1 413 aa12.71□□□□□ -0.37
RANBP3-216ENST00000589353 MRC1P22897 1456 aa12.71□□□□□ -0.38
RANBP3-216ENST00000589353 NRAPQ86VF7 1730 aa12.71□□□□□ -0.38
RANBP3-216ENST00000589353 DISP2A7MBM2 1401 aa12.71□□□□□ -0.38
RANBP3-216ENST00000589353 HSPA1LP34931 641 aa12.7□□□□□ -0.38
RANBP3-216ENST00000589353 ZNF790Q6PG37 636 aa12.7□□□□□ -0.38
RANBP3-216ENST00000589353 ITPRIPQ8IWB1 547 aa12.7□□□□□ -0.38
RANBP3-216ENST00000589353 C8orf37Q96NL8 207 aa12.7□□□□□ -0.38
RANBP3-216ENST00000589353 SIPA1L3O60292 1781 aaPredicted RBP12.7□□□□□ -0.38
RANBP3-216ENST00000589353 VPS72Q15906 364 aa12.69□□□□□ -0.38
RANBP3-216ENST00000589353 FNBP4Q8N3X1 1017 aaPredicted RBP12.69□□□□□ -0.38
RANBP3-216ENST00000589353 FMNL2Q96PY5 1086 aa12.69□□□□□ -0.38
RANBP3-216ENST00000589353 TCERG1O14776 1098 aaKnown RBP12.68□□□□□ -0.38
RANBP3-216ENST00000589353 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
RANBP3-216ENST00000589353 RLBP1P12271 317 aa12.68□□□□□ -0.38
RANBP3-216ENST00000589353 DDB1Q16531 1140 aa12.68□□□□□ -0.38
RANBP3-216ENST00000589353 TMOD3Q9NYL9 352 aa12.68□□□□□ -0.38
RANBP3-216ENST00000589353 HEG1Q9ULI3 1381 aa12.68□□□□□ -0.38
RANBP3-216ENST00000589353 ABCC4O15439 1325 aa12.67□□□□□ -0.38
RANBP3-216ENST00000589353 SNRPA1P09661 255 aaKnown RBP12.67□□□□□ -0.38
RANBP3-216ENST00000589353 EIF2S2P20042 333 aaKnown RBP12.67□□□□□ -0.38
RANBP3-216ENST00000589353 TMEM57Q8N5G2 664 aa12.67□□□□□ -0.38
RANBP3-216ENST00000589353 DBF4Q9UBU7 674 aaPredicted RBP12.67□□□□□ -0.38
RANBP3-216ENST00000589353 USP21Q9UK80 565 aa12.67□□□□□ -0.38
RANBP3-216ENST00000589353 TNS2Q63HR2 1409 aa12.67□□□□□ -0.38
RANBP3-216ENST00000589353 WNK3Q9BYP7 1800 aa12.67□□□□□ -0.38
RANBP3-216ENST00000589353 KCNQ3O43525 872 aa12.66□□□□□ -0.38
RANBP3-216ENST00000589353 CENPQQ7L2Z9 268 aaPredicted RBP12.66□□□□□ -0.38
RANBP3-216ENST00000589353 CCT4P50991 539 aaKnown RBP12.65□□□□□ -0.38
RANBP3-216ENST00000589353 FLIIQ13045 1269 aa12.65□□□□□ -0.38
RANBP3-216ENST00000589353 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
RANBP3-216ENST00000589353 FKBP5Q13451 457 aaPredicted RBP12.65□□□□□ -0.38
RANBP3-216ENST00000589353 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.38
RANBP3-216ENST00000589353 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
RANBP3-216ENST00000589353 HYPKQ9NX55 129 aa12.65□□□□□ -0.38
RANBP3-216ENST00000589353 TNNQ9UQP3 1299 aa12.65□□□□□ -0.38
RANBP3-216ENST00000589353 SHANK3Q9BYB0 1731 aa12.65□□□□□ -0.38
RANBP3-216ENST00000589353 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.65□□□□□ -0.38
RANBP3-216ENST00000589353 LRP6O75581 1613 aa12.64□□□□□ -0.39
RANBP3-216ENST00000589353 NECTIN2Q92692 538 aa12.64□□□□□ -0.39
RANBP3-216ENST00000589353 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-216ENST00000589353 BCL9LQ86UU0 1499 aa12.64□□□□□ -0.39
RANBP3-216ENST00000589353 DDX58O95786 925 aaKnown RBP12.63□□□□□ -0.39
RANBP3-216ENST00000589353 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
RANBP3-216ENST00000589353 DDX21Q9NR30 783 aaKnown RBP eCLIP12.63□□□□□ -0.39
RANBP3-216ENST00000589353 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
RANBP3-216ENST00000589353 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
RANBP3-216ENST00000589353 A0A0G2JS52 829 aa12.61□□□□□ -0.39
RANBP3-216ENST00000589353 ZBTB7BO15156 539 aaPredicted RBP12.61□□□□□ -0.39
RANBP3-216ENST00000589353 MYT1Q01538 1121 aa12.61□□□□□ -0.39
RANBP3-216ENST00000589353 G2E3Q7L622 706 aa12.61□□□□□ -0.39
RANBP3-216ENST00000589353 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
RANBP3-216ENST00000589353 ZBTB40Q9NUA8 1239 aa12.61□□□□□ -0.39
RANBP3-216ENST00000589353 TRPC5Q9UL62 973 aaPredicted RBP12.61□□□□□ -0.39
RANBP3-216ENST00000589353 AFF2P51816 1311 aa12.61□□□□□ -0.39
RANBP3-216ENST00000589353 PXDNLA1KZ92 1463 aa12.6□□□□□ -0.39
RANBP3-216ENST00000589353 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
RANBP3-216ENST00000589353 SLC4A10Q6U841 1118 aa12.6□□□□□ -0.39
RANBP3-216ENST00000589353 HDAC5Q9UQL6 1122 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms