RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 ATG3Q9NT62 314 aa13.28□□□□□ -0.28
PTPN2-208ENST00000589216 KCPQ6ZWJ8 1503 aa13.28□□□□□ -0.28
PTPN2-208ENST00000589216 C4AP0C0L4 1744 aa13.27□□□□□ -0.28
PTPN2-208ENST00000589216 MYH14Q7Z406 1995 aaKnown RBP13.27□□□□□ -0.28
PTPN2-208ENST00000589216 ERVV-2B6SEH9 535 aa13.27□□□□□ -0.29
PTPN2-208ENST00000589216 HSP90AB1P08238 724 aaKnown RBP13.27□□□□□ -0.29
PTPN2-208ENST00000589216 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.29
PTPN2-208ENST00000589216 ITPK1Q13572 414 aa13.27□□□□□ -0.29
PTPN2-208ENST00000589216 SLC4A9Q96Q91 983 aa13.27□□□□□ -0.29
PTPN2-208ENST00000589216 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
PTPN2-208ENST00000589216 AKAP4Q5JQC9 854 aa13.26□□□□□ -0.29
PTPN2-208ENST00000589216 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
PTPN2-208ENST00000589216 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
PTPN2-208ENST00000589216 PHACTR3Q96KR7 559 aa13.26□□□□□ -0.29
PTPN2-208ENST00000589216 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
PTPN2-208ENST00000589216 LGR6Q9HBX8 967 aa13.26□□□□□ -0.29
PTPN2-208ENST00000589216 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
PTPN2-208ENST00000589216 PTGER2P43116 358 aa13.25□□□□□ -0.29
PTPN2-208ENST00000589216 SIK1P57059 783 aa13.25□□□□□ -0.29
PTPN2-208ENST00000589216 SMIM5Q71RC9 77 aa13.25□□□□□ -0.29
PTPN2-208ENST00000589216 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
PTPN2-208ENST00000589216 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
PTPN2-208ENST00000589216 CABP4P57796 275 aa13.24□□□□□ -0.29
PTPN2-208ENST00000589216 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
PTPN2-208ENST00000589216 SPON1Q9HCB6 807 aa13.24□□□□□ -0.29
PTPN2-208ENST00000589216 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
PTPN2-208ENST00000589216 NFATC2IPQ8NCF5 419 aa13.23□□□□□ -0.29
PTPN2-208ENST00000589216 SGIP1Q9BQI5 828 aa13.23□□□□□ -0.29
PTPN2-208ENST00000589216 TFCP2L1Q9NZI6 479 aa13.23□□□□□ -0.29
PTPN2-208ENST00000589216 MTFR1LQ9H019 292 aa13.22□□□□□ -0.29
PTPN2-208ENST00000589216 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
PTPN2-208ENST00000589216 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.29
PTPN2-208ENST00000589216 ATP6V1AP38606 617 aa13.21□□□□□ -0.29
PTPN2-208ENST00000589216 RALBP1Q15311 655 aa13.21□□□□□ -0.29
PTPN2-208ENST00000589216 COL23A1Q86Y22 540 aaPredicted RBP13.21□□□□□ -0.29
PTPN2-208ENST00000589216 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
PTPN2-208ENST00000589216 NUDCQ9Y266 331 aa13.21□□□□□ -0.29
PTPN2-208ENST00000589216 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
PTPN2-208ENST00000589216 PTCD1O75127 700 aaKnown RBP13.2□□□□□ -0.3
PTPN2-208ENST00000589216 SLC39A6Q13433 755 aa13.2□□□□□ -0.3
PTPN2-208ENST00000589216 IL17REQ8NFR9 667 aa13.2□□□□□ -0.3
PTPN2-208ENST00000589216 GAS2L2Q8NHY3 880 aa13.2□□□□□ -0.3
PTPN2-208ENST00000589216 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
PTPN2-208ENST00000589216 PHF14O94880 888 aa13.19□□□□□ -0.3
PTPN2-208ENST00000589216 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
PTPN2-208ENST00000589216 AK7Q96M32 723 aa13.19□□□□□ -0.3
PTPN2-208ENST00000589216 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
PTPN2-208ENST00000589216 GNPATO15228 680 aa13.18□□□□□ -0.3
PTPN2-208ENST00000589216 FCHSD2O94868 740 aa13.18□□□□□ -0.3
PTPN2-208ENST00000589216 PRKRIP1Q9H875 184 aaPredicted RBP13.18□□□□□ -0.3
PTPN2-208ENST00000589216 PPP1R1BQ9UD71 204 aaPredicted RBP13.18□□□□□ -0.3
PTPN2-208ENST00000589216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
PTPN2-208ENST00000589216 PLEKHF1Q96S99 279 aa13.17□□□□□ -0.3
PTPN2-208ENST00000589216 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
PTPN2-208ENST00000589216 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
PTPN2-208ENST00000589216 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
PTPN2-208ENST00000589216 MCM10Q7L590 875 aa13.16□□□□□ -0.3
PTPN2-208ENST00000589216 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
PTPN2-208ENST00000589216 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.3
PTPN2-208ENST00000589216 SLC16A10Q8TF71 515 aa13.15□□□□□ -0.3
PTPN2-208ENST00000589216 SCN7AQ01118 1682 aa13.15□□□□□ -0.31
PTPN2-208ENST00000589216 KIAA1551Q9HCM1 1747 aa13.14□□□□□ -0.31
PTPN2-208ENST00000589216 SSFA2P28290 1259 aa13.14□□□□□ -0.31
PTPN2-208ENST00000589216 CRKLP46109 303 aaKnown RBP13.14□□□□□ -0.31
PTPN2-208ENST00000589216 TEFQ10587 303 aa13.14□□□□□ -0.31
PTPN2-208ENST00000589216 ARXQ96QS3 562 aa13.14□□□□□ -0.31
PTPN2-208ENST00000589216 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
PTPN2-208ENST00000589216 KCNQ3O43525 872 aa13.13□□□□□ -0.31
PTPN2-208ENST00000589216 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
PTPN2-208ENST00000589216 ZNF496Q96IT1 587 aaPredicted RBP13.13□□□□□ -0.31
PTPN2-208ENST00000589216 KIF13BQ9NQT8 1826 aa13.12□□□□□ -0.31
PTPN2-208ENST00000589216 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
PTPN2-208ENST00000589216 THUMPD2Q9BTF0 503 aaKnown RBP13.12□□□□□ -0.31
PTPN2-208ENST00000589216 BCORQ6W2J9 1755 aa13.12□□□□□ -0.31
PTPN2-208ENST00000589216 HEG1Q9ULI3 1381 aa13.11□□□□□ -0.31
PTPN2-208ENST00000589216 CYP19A1P11511 503 aaPredicted RBP13.11□□□□□ -0.31
PTPN2-208ENST00000589216 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
PTPN2-208ENST00000589216 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
PTPN2-208ENST00000589216 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
PTPN2-208ENST00000589216 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
PTPN2-208ENST00000589216 CCDC146Q8IYE0 955 aa13.11□□□□□ -0.31
PTPN2-208ENST00000589216 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
PTPN2-208ENST00000589216 RTCBQ9Y3I0 505 aaKnown RBP13.11□□□□□ -0.31
PTPN2-208ENST00000589216 MAPK8IP3Q9UPT6 1336 aa13.11□□□□□ -0.31
PTPN2-208ENST00000589216 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
PTPN2-208ENST00000589216 POLD1P28340 1107 aa13.1□□□□□ -0.31
PTPN2-208ENST00000589216 TTC5Q8N0Z6 440 aa13.1□□□□□ -0.31
PTPN2-208ENST00000589216 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
PTPN2-208ENST00000589216 NLGN2Q8NFZ4 835 aa13.1□□□□□ -0.31
PTPN2-208ENST00000589216 SYT17Q9BSW7 474 aa13.1□□□□□ -0.31
PTPN2-208ENST00000589216 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
PTPN2-208ENST00000589216 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
PTPN2-208ENST00000589216 SOS1Q07889 1333 aaPredicted RBP13.1□□□□□ -0.31
PTPN2-208ENST00000589216 COL15A1P39059 1388 aa13.09□□□□□ -0.31
PTPN2-208ENST00000589216 PRAMEF22A3QJZ6 481 aa13.09□□□□□ -0.31
PTPN2-208ENST00000589216 BTBD11A6QL63 1104 aa13.09□□□□□ -0.31
PTPN2-208ENST00000589216 RTF1Q92541 710 aaKnown RBP13.09□□□□□ -0.31
PTPN2-208ENST00000589216 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
PTPN2-208ENST00000589216 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
PTPN2-208ENST00000589216 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms