RNA–Protein interactions for RNA: ENST00000588737.5

RPRD1A-207, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2 BASIC

Gene RPRD1A, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-207ENST00000588737 HMOX1P09601 288 aa30.36■■■□□ 2.45
RPRD1A-207ENST00000588737 YY1P25490 414 aa30.36■■■□□ 2.45
RPRD1A-207ENST00000588737 MSL1Q68DK7 614 aa30.35■■■□□ 2.45
RPRD1A-207ENST00000588737 RBM42Q9BTD8 480 aaKnown RBP30.35■■■□□ 2.45
RPRD1A-207ENST00000588737 MAP3K5Q99683 1374 aa30.35■■■□□ 2.45
RPRD1A-207ENST00000588737 C4BP0C0L5 1744 aa30.34■■■□□ 2.45
RPRD1A-207ENST00000588737 PHF14O94880 888 aa30.34■■■□□ 2.45
RPRD1A-207ENST00000588737 ITPK1Q13572 414 aa30.34■■■□□ 2.45
RPRD1A-207ENST00000588737 KDM6AO15550 1401 aaPredicted RBP30.32■■■□□ 2.44
RPRD1A-207ENST00000588737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.31■■■□□ 2.44
RPRD1A-207ENST00000588737 SMIM5Q71RC9 77 aa30.31■■■□□ 2.44
RPRD1A-207ENST00000588737 NFATC2IPQ8NCF5 419 aa30.31■■■□□ 2.44
RPRD1A-207ENST00000588737 AKAP4Q5JQC9 854 aa30.3■■■□□ 2.44
RPRD1A-207ENST00000588737 AMIGO3Q86WK7 504 aa30.3■■■□□ 2.44
RPRD1A-207ENST00000588737 COL24A1Q17RW2 1714 aa30.3■■■□□ 2.44
RPRD1A-207ENST00000588737 GNPATO15228 680 aa30.29■■■□□ 2.44
RPRD1A-207ENST00000588737 SSFA2P28290 1259 aa30.29■■■□□ 2.44
RPRD1A-207ENST00000588737 U2SURPO15042 1029 aaKnown RBP30.26■■■□□ 2.43
RPRD1A-207ENST00000588737 GPR162Q16538 588 aa30.26■■■□□ 2.43
RPRD1A-207ENST00000588737 SLC4A9Q96Q91 983 aa30.26■■■□□ 2.43
RPRD1A-207ENST00000588737 PTCD1O75127 700 aaKnown RBP30.24■■■□□ 2.43
RPRD1A-207ENST00000588737 MTHFSDQ2M296 383 aaKnown RBP30.23■■■□□ 2.43
RPRD1A-207ENST00000588737 LGR6Q9HBX8 967 aa30.23■■■□□ 2.43
RPRD1A-207ENST00000588737 RTCBQ9Y3I0 505 aaKnown RBP30.23■■■□□ 2.43
RPRD1A-207ENST00000588737 PELP1Q8IZL8 1130 aaKnown RBP30.22■■■□□ 2.43
RPRD1A-207ENST00000588737 NLGN2Q8NFZ4 835 aa30.22■■■□□ 2.43
RPRD1A-207ENST00000588737 CFAP53Q96M91 514 aa30.22■■■□□ 2.43
RPRD1A-207ENST00000588737 UBR3Q6ZT12 1888 aa30.22■■■□□ 2.43
RPRD1A-207ENST00000588737 TRAPPC3LQ5T215 181 aa30.21■■■□□ 2.43
RPRD1A-207ENST00000588737 RC3H1Q5TC82 1133 aaKnown RBP30.21■■■□□ 2.43
RPRD1A-207ENST00000588737 RNMTO43148 476 aaKnown RBP30.2■■■□□ 2.43
RPRD1A-207ENST00000588737 SLC52A2Q9HAB3 445 aa30.2■■■□□ 2.43
RPRD1A-207ENST00000588737 CD2APQ9Y5K6 639 aa30.17■■■□□ 2.42
RPRD1A-207ENST00000588737 COL3A1P02461 1466 aaPredicted RBP30.17■■■□□ 2.42
RPRD1A-207ENST00000588737 RPS6KA4O75676 772 aa30.16■■■□□ 2.42
RPRD1A-207ENST00000588737 CNTNAP4Q9C0A0 1308 aa30.16■■■□□ 2.42
RPRD1A-207ENST00000588737 SCN11AQ9UI33 1791 aa30.15■■■□□ 2.42
RPRD1A-207ENST00000588737 PPP2R1AP30153 589 aa30.14■■■□□ 2.42
RPRD1A-207ENST00000588737 NUDCQ9Y266 331 aa30.14■■■□□ 2.42
RPRD1A-207ENST00000588737 ZNF831Q5JPB2 1677 aa30.14■■■□□ 2.41
RPRD1A-207ENST00000588737 ADRA2BP18089 450 aa30.13■■■□□ 2.41
RPRD1A-207ENST00000588737 ARHGEF1Q92888 912 aaKnown RBP30.13■■■□□ 2.41
RPRD1A-207ENST00000588737 RFC4P35249 363 aa30.12■■■□□ 2.41
RPRD1A-207ENST00000588737 GAS2L2Q8NHY3 880 aa30.12■■■□□ 2.41
RPRD1A-207ENST00000588737 CRKLP46109 303 aaKnown RBP30.11■■■□□ 2.41
RPRD1A-207ENST00000588737 SLC39A6Q13433 755 aa30.11■■■□□ 2.41
RPRD1A-207ENST00000588737 NLGN1Q8N2Q7 840 aa30.1■■■□□ 2.41
RPRD1A-207ENST00000588737 GNAT3A8MTJ3 354 aa30.08■■■□□ 2.41
RPRD1A-207ENST00000588737 GRIN3BO60391 1043 aa30.07■■■□□ 2.4
RPRD1A-207ENST00000588737 MMP10P09238 476 aa30.07■■■□□ 2.4
RPRD1A-207ENST00000588737 COL5A3P25940 1745 aaPredicted RBP30.06■■■□□ 2.4
RPRD1A-207ENST00000588737 U2AF1L5P0DN76 240 aaPredicted RBP30.06■■■□□ 2.4
RPRD1A-207ENST00000588737 PRKAR2BP31323 418 aa30.06■■■□□ 2.4
RPRD1A-207ENST00000588737 U2AF1Q01081 240 aaKnown RBP eCLIP30.06■■■□□ 2.41e-6■■■□□ 15.4
RPRD1A-207ENST00000588737 DNAJC10Q8IXB1 793 aa30.06■■■□□ 2.4
RPRD1A-207ENST00000588737 UTRNP46939 3433 aa30.05■■■□□ 2.4
RPRD1A-207ENST00000588737 YBX3P16989 372 aaKnown RBP eCLIP30.04■■■□□ 2.4
RPRD1A-207ENST00000588737 TEFQ10587 303 aa30.04■■■□□ 2.4
RPRD1A-207ENST00000588737 IL17REQ8NFR9 667 aa30.04■■■□□ 2.4
RPRD1A-207ENST00000588737 RSPH6AQ9H0K4 717 aa30.04■■■□□ 2.4
RPRD1A-207ENST00000588737 MYH14Q7Z406 1995 aaKnown RBP30.03■■■□□ 2.4
RPRD1A-207ENST00000588737 GYS1P13807 737 aa30.03■■■□□ 2.4
RPRD1A-207ENST00000588737 INTS5Q6P9B9 1019 aaKnown RBP30.03■■■□□ 2.4
RPRD1A-207ENST00000588737 TTC5Q8N0Z6 440 aa30.03■■■□□ 2.4
RPRD1A-207ENST00000588737 PHACTR3Q96KR7 559 aa30.03■■■□□ 2.4
RPRD1A-207ENST00000588737 MRC1P22897 1456 aa30.03■■■□□ 2.4
RPRD1A-207ENST00000588737 CHD4Q14839 1912 aa30.02■■■□□ 2.4
RPRD1A-207ENST00000588737 CCDC87Q9NVE4 849 aa30.02■■■□□ 2.4
RPRD1A-207ENST00000588737 ZNF784Q8NCA9 323 aaPredicted RBP30■■■□□ 2.39
RPRD1A-207ENST00000588737 VIRMAQ69YN4 1812 aaKnown RBP30■■■□□ 2.39
RPRD1A-207ENST00000588737 FCHSD2O94868 740 aa29.99■■■□□ 2.39
RPRD1A-207ENST00000588737 CYP19A1P11511 503 aaPredicted RBP29.99■■■□□ 2.39
RPRD1A-207ENST00000588737 VSIG10Q8N0Z9 540 aa29.99■■■□□ 2.39
RPRD1A-207ENST00000588737 PARP3Q9Y6F1 533 aa29.99■■■□□ 2.39
RPRD1A-207ENST00000588737 TJP1Q07157 1748 aa29.99■■■□□ 2.39
RPRD1A-207ENST00000588737 ADAMTS7Q9UKP4 1686 aa29.98■■■□□ 2.39
RPRD1A-207ENST00000588737 SRP68Q9UHB9 627 aaKnown RBP29.98■■■□□ 2.39
RPRD1A-207ENST00000588737 WWC3Q9ULE0 1092 aa29.95■■■□□ 2.39
RPRD1A-207ENST00000588737 USP42Q9H9J4 1324 aaKnown RBP29.95■■■□□ 2.38
RPRD1A-207ENST00000588737 CICQ96RK0 1608 aaPredicted RBP29.94■■■□□ 2.38
RPRD1A-207ENST00000588737 ZPR1O75312 459 aa29.94■■■□□ 2.38
RPRD1A-207ENST00000588737 ZNF790Q6PG37 636 aa29.94■■■□□ 2.38
RPRD1A-207ENST00000588737 KCPQ6ZWJ8 1503 aa29.94■■■□□ 2.38
RPRD1A-207ENST00000588737 FKBP8Q14318 412 aa29.93■■■□□ 2.38
RPRD1A-207ENST00000588737 RTF1Q92541 710 aaKnown RBP29.93■■■□□ 2.38
RPRD1A-207ENST00000588737 SOS1Q07889 1333 aaPredicted RBP29.93■■■□□ 2.38
RPRD1A-207ENST00000588737 STARD3NLO95772 234 aa29.92■■■□□ 2.38
RPRD1A-207ENST00000588737 ZBTB1Q9Y2K1 713 aa29.92■■■□□ 2.38
RPRD1A-207ENST00000588737 GOLGB1Q14789 3259 aaKnown RBP29.92■■■□□ 2.38
RPRD1A-207ENST00000588737 TGFB2P61812 414 aa29.91■■■□□ 2.38
RPRD1A-207ENST00000588737 ZNF496Q96IT1 587 aaPredicted RBP29.91■■■□□ 2.38
RPRD1A-207ENST00000588737 BTBD11A6QL63 1104 aa29.9■■■□□ 2.38
RPRD1A-207ENST00000588737 CANXP27824 592 aaKnown RBP29.9■■■□□ 2.38
RPRD1A-207ENST00000588737 USPL1Q5W0Q7 1092 aa29.9■■■□□ 2.38
RPRD1A-207ENST00000588737 TEX13AQ9BXU3 409 aaPredicted RBP29.9■■■□□ 2.38
RPRD1A-207ENST00000588737 CEMIPQ8WUJ3 1361 aa29.9■■■□□ 2.38
RPRD1A-207ENST00000588737 C4AP0C0L4 1744 aa29.89■■■□□ 2.38
RPRD1A-207ENST00000588737 NEFMP07197 916 aa29.89■■■□□ 2.38
RPRD1A-207ENST00000588737 FMNL2Q96PY5 1086 aa29.89■■■□□ 2.38
RPRD1A-207ENST00000588737 A0A0G2JLW4 131 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms